New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5493377 =	68 (1.260)	4 (0.080)	3/248	NT	5.8%	coding (639/1698 nt)	cobJ	precorrin‑3B C17‑methyltransferase
	?	NC_002947	5493425 =	66 (1.310)					coding (591/1698 nt)	cobJ	precorrin‑3B C17‑methyltransferase

ACTTGCTGGCGGGTGAGTCTGTGCGCATCGAAGGTAACGCCCCGTGGCTGCAGCTGGCGCAGTTGCCCGCCAGCGAAGCGGCGCAGCGCACCATCCATGTGGGGCATCAGGCGCGCCCGGCCAACCGCGACGAGCTGCTGATCTACCCGCGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5493531‑5493377 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgcctgATGCCCCACATGGATGGTGCGCTGCGCCGCTTCGCTGGCGGGCAACTGCGCCAGCTGCAGCCACGGGGCGTTACCTTCGATGCGCACAGACTCACCCGCCAGCAAGTCGGATACAAAGCGCTTGCCTTGCTCGATGTCGGCCAA  >  NC_002947/5493425‑5493568                                                                                                                                                                                                                                                                                                             ACTTGCTGGCGGGTGAGTCTGTGCGCATCGAAGGTAACGCCCCGTGGCTGCAGCTGGCGCAGTTGCCCGCCAGCGAAGCGGCGCAGCGCACCATCCATGTGGGGCATCAGGCGCGCCCGGCCAACCGCGACGAGCTGCTGATCTACCCG                                                                                                                                                        >  4:83098/1‑149       TGGCGGGTGAGTCTGTGCGCATCGAAGGTAACGCCCCGTGGCTGCAGCTGGCGCAGTTGCCCGCCAGCGAAGCGGCGCAGCGCACCATCCATGTGGGGCATCAGGCGCGCCCGGCCAACCGCGACGAGCTGCTGATCTACCCGCGCCTG                                                                                                                                                  >  2:25805/1‑149       TGGCGGGTGAGTCTGTGCGCATCGAAGGTAACGCCCCGTGGCTGCAGCTGGCGCAGTTGCCCGCCAGCGAAGCGGCGCAGCGCACCATCCATGTGGGGCATCAGGCGCGCCCGGCCAACCGCGACGAGCTGCTGATCTACCCGCGCCTG                                                                                                                                                  >  4:65403/1‑149         GCGGGTGAGTCTGTGCGCATCGAAGGTAACGCCCCGTGGCTGCAGCTGGCGCAGTTGCCCGCCAGCGAAGCGGCGCAGCGCACCATCCATGTGGGGCATCAGGCGCGCCCGGCCAACCGCGACGAGCTGCTGATCTACCCGCGCCTG                                                                                                                                                  <  4:301517/147‑1           GGGTGAGTCTGTGCGCATCGAAGGTAACGCCCCGTGGCTGCAGCTGGCGCAGTTGCCCGCCAGCGAAGCGGCGCAGCGCACCATCCATGTGGGGCATCAGGCGCGCCCGGCCAACCGCGACGAGCTGCTGATCTACCCGCGCCTG                                                                                                                                                  <  5:231987/145‑1           GGGTGAGTCTGTGCGCATCGAAGGTAACGCCCCGTGGCTGCAGCTGGCGCAGTTGCCCGCCAGCGAAGCGGCGCAGCGCACCATCCATGTGGGGCATCAGGCGCGCCCGGCCAACCGCGACGAGCTGCTGATCTACCCGCGCCTG                                                                                                                                                  >  6:231987/1‑145                                                                                                         CATCAGGCGCGCCCGGCCAACCGCGACGAGCTGCTGATCTACCCGCGCCTGATGCCCCACATGGATGGTGCGCTGCGCCGCTTCGCTGGCGGGCAACTGCGCCAGCTGCAGCCACGGGGCGTTACCTTCGATG                                                                <  5:12685/133‑1                                                                                                         CATCAGGCGCGCCCGGCCAACCGCGACGAGCTGCTGATCTACCCGCGCCTGATGCCCCACATGGATGGTGCGCTGCGCCGCTTCGCTGGCGGGCAACTGCGCCAGCTGCAGCCACGGGGCGTTACCTTCGATG                                                                >  6:12685/1‑133                                                                                                          ATCAGGCGCGCCCGGCCAACCGCGACGAGCTGCTGATCTACCCGCGCCTGATGCCCCACATGGATGGTGCGCTGCGCCGCTTCGCTGGCGGGCAACTGCGCCAGCTGCAGCCACGGGGCGTTACCTTCGATGCGCACAGACTCACCCGC                                               >  2:224023/1‑149                                                                                                          ATCAGGCGCGCCCGGCCAACCGCGACGAGCTGCTGATCTACCCGCGCCTGATGCCCCACATGGATGGTGCGCTGCGCCGCTTCGCTGGCGGGCAACTGCGCCAGCTGCAGCCACGGGGCGTTACCTTCGATGCGCACAGACTCACCCGC                                               >  8:204415/1‑149                                                                                                                                                  CCCGCGCCTGATGCCCCACATGGATGGTGCGCTGCGCCGCTTCGCTGGCGGGCAACTGCGCCAGCTGCAGCCACGGGGCGTTACCTTCGATGCGCACAGACTCACCCGCCAGCAAGTCGGATACAAAGCGCTTGCCTTGCTCGATGTCG       <  7:204415/149‑1                                                                                                                                                     GCGCCTGATGCCCCACATGGATGGTGCGCTGCGCCGCTTCGCTGGCGGGCAACTGCGCCAGCTGCAGCCACGGGGCGTTACCTTCGATGCGCACAGACTCACCCGCCAGCAAGTCGGATACAAAGCGCTTGCCTTGCTCGATGTCGGCC    <  7:110869/149‑1                                                                                                                                                     GCGCCTGATGCCCCACATGGATGGTGCGCTGCGCCGCTTCGCTGGCGGGCAACTGCGCCAGCTGCAGCCACGCGGCGTTACCTTCGATGCGCACAGACTCACCCGCCAGCAAGTCGGATACAAAGCGCTTGCCTTGCTCGATGTCGGC     >  3:181865/1‑148                                                                                                                                                       GCCTGATGCCCCACATGGATGGTGCGCTGCGCCGCTTCGCTGGCGGGCAACTGCGCCAGCTGCAGCCACGGGGCGTTACCTTCGATGCGCACAGACTCACCCGCCAGCAAGTCGGATACAAAGCGCTTGCCTTGCTCGATGTCGGCCAA  <  7:74848/149‑1                                                                                                                                                       GCCTGATGCCCCACATGGATGGTGCGCTGCGCCGCTTCGCTGGCGGGCAACTGCGCCAGCTGCAGCCACGGGGCGTTACCTTCGATGCGCACAGACTCACCCGCCAGCAAGTCGGATACAAAGCGCTTGCCTTGCTCGATGTAGGCCAA  >  3:220657/1‑149                                                                                                                                                                                                                                                                                                             ACTTGCTGGCGGGTGAGTCTGTGCGCATCGAAGGTAACGCCCCGTGGCTGCAGCTGGCGCAGTTGCCCGCCAGCGAAGCGGCGCAGCGCACCATCCATGTGGGGCATCAGGCGCGCCCGGCCAACCGCGACGAGCTGCTGATCTACCCGCGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5493531‑5493377 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgcctgATGCCCCACATGGATGGTGCGCTGCGCCGCTTCGCTGGCGGGCAACTGCGCCAGCTGCAGCCACGGGGCGTTACCTTCGATGCGCACAGACTCACCCGCCAGCAAGTCGGATACAAAGCGCTTGCCTTGCTCGATGTCGGCCAA  >  NC_002947/5493425‑5493568

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.