New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5515852	51 (0.950)	4 (0.080)	4/254	NT	6.5%	coding (174/960 nt)	cbpA	curved DNA‑binding protein
	?	NC_002947	= 5515904	66 (1.270)					coding (122/960 nt)	cbpA	curved DNA‑binding protein

CACCGAAGATCGAGCTGAAGAAGTCGGAGAAGTCGCCGCCTTCGAAGCCGCCGCCGCCACCGCGGCTTTCCCAACCCGGTGGTGCCTGGAACGGCCGGCCATGCTGGCCGCCGTACTTGCGGATTTCATCGAACTCGGCACGTTTCTGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5515701‑5515852 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgACGCCGAGGAGAAATTCAAGGAGGCCAACGAGGCCTATGAGGTGCTGGGCGACGCGCAG  <  NC_002947/5515904‑5515846                                                                                                                                                                                                                     CACCGAAGATCGAGCTGAAGAAGTCGGAGAAGTCGCCGCCTTCGAAGCCGCCGCCGCCACCGCGGCTTTCCCAACCCGGTGGTGCCTGGAACGGCCGGCCATGCTGGCCGCCGTACTTGCGGATTTCATCGAACTCGGCACGTTTCTGC                                                                <  3:5443/149‑1  ACCGAAGATCGAGCTGAAGAAGTCGGAGAAGTCGCCGCCTTCGAAGCCGCCGCCGCCACCGCGGCTTTCCCAACCCGGTGGTGCCTGGAACGGCCGGCCATGCTGGCCGCCGTACTTGCGGATTTCATCGAACTCGGCACGTTTCTGCG                                                               >  1:300442/1‑149                                                        GCCACCGCGGCTTTCCCAACCAGGTGGTGCCTAGAACGGCCGTCCATGCTGGCCGCGGTACTTGCGGATTTCATCGAACTCGGCACGTTTCTGCGCGACGCCGAGGAGAAATTCAAGGAGGCCAACGAGGACTATGAGGTGCTGGGCta         >  5:234772/1‑147                                                           ACCGCGGCTTTCCCAACCCGGTGGTGCCTGGAACGGCCGGCCATGCTGGCCGCCGTACTTGCGGATTTCATCGAACTCGGCACGTTTCTGCGCGACGCCGAGGAGAAATTCAAGGAGGCCAACGAGGCCTATGAGGTGCTGGGCGACGC      >  2:320835/1‑149                                                               CGGCTTTCCCAACCCGGTGGTGCCTGGAACGGCCGGCCATGCTGGCCGCCGTACTTGCGGATTTCATCGAACTCGGCACGTTTCTGCGCGACGCCGAGGAGAAATTCAAGGAGGCCAACGAGGCCTATGAGGTGCTGGGCGACGCGCAG  <  1:320835/149‑1                                                                tGCTTTACCAACCCGGTGTTGCGTAGAACGTCCTGCCATGCTGGCCGCCGTACTTGCGGATTTCATCGAACTCGGCACGTTTCTGCGCGACGCCGAGGATAAATTCAAGGAGGCCAACGAGGCCTATGAGGTGCTTGGCGACGCGCA   <  6:234772/146‑1                                                                                                                                                                                                                     CACCGAAGATCGAGCTGAAGAAGTCGGAGAAGTCGCCGCCTTCGAAGCCGCCGCCGCCACCGCGGCTTTCCCAACCCGGTGGTGCCTGGAACGGCCGGCCATGCTGGCCGCCGTACTTGCGGATTTCATCGAACTCGGCACGTTTCTGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5515701‑5515852 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgACGCCGAGGAGAAATTCAAGGAGGCCAACGAGGCCTATGAGGTGCTGGGCGACGCGCAG  <  NC_002947/5515904‑5515846

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.