New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5523916 =	71 (1.320)	5 (0.100)	5/254	NT	6.8%	coding (957/2067 nt)	yhjG	protein YhjG
	?	NC_002947	5523962 =	69 (1.330)					coding (911/2067 nt)	yhjG	protein YhjG

ACCGACGGCCACCTACGCGCCAACCTGCAGGCGGCGCAAGGGGCGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5523963‑5523916 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtcgGTGGAATAGGCCGGGGTGTCAGGCAAGGTGACGCCGGTCAATGGGTAGAGGTTGCCCAGGCTGGCACCCGACAAACGCAGGCGCAGGTCGAGGGCACCAAGGTTGCGCGGGTCGGTGAGGGTGCCGGCGAGCACCACATGGGTGTCG  >  NC_002947/5523962‑5524108                                                                                                                                                                                                     ACCGACGGCCACCTACGCGCCAACCTGCAGGCGGCGCAAGGGGCGTCGGTGGAATAGGCCGGGGTGTCAGGCAAGGTGACGCCGGTCAATGGGTAGAGGTTGCCCAGGCTGGCACCCGACAAACGCAGGCGCAGGTCGAGGGCACCAAG                                                >  2:176336/1‑149  CCGACGGCCACCTACGCGCCAACCTGCAGGCGGCGCAAGGGGCGTCGGTGGAATAGGCCGGGGTGTCAGGCAAGGTGACGCCGGTCAATGGGTAGAGGTTGCCCAGGCTGGCACCCGACAAACGCAGGCGCAGGTCGAGGGCACCAAGG                                               >  8:7784/1‑149   CGACGGCCACCTACGCGCCAACCTGCAGGCGGCGCAAGGGGCGTCGGTGGAATAGGCCGGGGTGTCAGGCAAGGTGACGCCGGTCAATGGGTAGAGGTTGCCCAGGCTGGCACCCGACAAACGCAGGCGCAGGTCGAGGGCACCAAGGT                                              >  3:315941/1‑149                CGCGCCAACCTGCAGGCGGCGCAAGGGGCGTCGGTGGAATAGGCCGGGGTGTCAGGCAAGGTGACGCCGGTCAATGGGTAGAGGTTGCCCAGGCTGGCACCCGACAAACGCAGGCGCAGGTCGAGGGCACCAAGGTTGCGCGGGTCGG                                  <  1:176336/148‑1                              GGCGGCGCAAGGGGCGTCGGTGGAATAGGCCGGGGTGTCAGGCAAGGTGACGCCGGTCAATGGGTAGAGGTTGCCCAGGCTGGCACCCGACAAACGCAGGCGCAGGTCGAGGGCACCAAGGTTGCGCGGGTCGGTGAGGGTGCCGGCGA                   <  4:315941/149‑1                                            CGTCGGTGGAATAGGCCGGGGTGTCAGGCAAGGTGACGCCGGTCAATGGGTAGAGGTTGCCCAGGCTGGCACCCGACAAACGCAGGCGCAGGTCGAGGGCACCAAGGTTGCGCGGGTCGGTGAGGGTGCCGGCGAGCACCACATGGGTG     >  6:244486/1‑149                                            CGTCGGTGGAATAGGCCGGGGTGTCAGGCAAGGTGACGCCGGTCAATGGGTAGAGGTTGCCCAGGCTGGCACCCGACAAACGCAGGCGCAGGTCGAGGGCACCAAGGTTGCGCGGGTCGGTGAGGGTGACGGCGAGCACCACATGGGTG     >  6:249133/1‑149                                                GGTGGAATAGGCCGGGGTGTCAGGCAAGGTGACGCCGGTCAATGGGTAGAGGTTGCCCAGGCTGGCACCCGACAAACGCAGGCGCAGGTCGAGGGCACCAAGGTTGCGCGGGTCGGTGAGGGTGCCGGCGAGCACCACATGGGTGTCG  <  1:331168/148‑1                                                                                                                                                                                                     ACCGACGGCCACCTACGCGCCAACCTGCAGGCGGCGCAAGGGGCGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5523963‑5523916 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtcgGTGGAATAGGCCGGGGTGTCAGGCAAGGTGACGCCGGTCAATGGGTAGAGGTTGCCCAGGCTGGCACCCGACAAACGCAGGCGCAGGTCGAGGGCACCAAGGTTGCGCGGGTCGGTGAGGGTGCCGGCGAGCACCACATGGGTGTCG  >  NC_002947/5523962‑5524108

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.