New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5606438 =	70 (1.300)	5 (0.100)	5/252	NT	7.5%	coding (1701/2196 nt)	cyaB	cyclolysin secretion/processing ATP‑binding protein CyaB
	?	NC_002947	5606471 =	57 (1.110)					coding (1668/2196 nt)	cyaB	cyclolysin secretion/processing ATP‑binding protein CyaB

TTGTAGGTCGCTCGGGGTCAGGCAAGAGCACGCTGACACGCTTGATTCAGCGGCTGTACTCACCTGAGCGGGGGCGGGTATTGCCCGACGGTGCTGACCTGGCGGTAGCCGATGTGGCGTCACTGCGTCGGCAGATCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5606577‑5606438 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcggcTACCGCCAGGTCAGCACCGTCGGGCAATACCCGCCCCCGCTCAGGTGAGTACAGCCGCTGAATCAAGCGTGTCAGCGTGCTCTTGCCTGACCCCGAGCGACCTACAACGCCTATCACTTCTCCGGCGG  >  NC_002947/5606471‑5606598                                                                                                                                                                                                                                                                              TTGTAGGTCGCTCGGGGTCAGGCAAGAGCACGCTGACACGCTTGATTCAGCGGCTGTACTCACCTGAGCGGGGGCGGGTATTGCCCGACGGTGCTGACCTGGCGGTAGCCGATCTGCCGACGCAGTGACGCCACATCGGCTACCGCCAG                                                                                                                         <  5:217939/149‑1                                                                                                         GTAGCCGATGTGGCGTCACTGCGTCGGCAGATCGGCTACCGCCAGGTCAGCACCGTCGGGCAATACCCGCCCCCGCTCAGGTGAGTACAGCCGCTGAATCAAGCGTGTCAGCGTGCTCTTGCCTGACCCCGAGCGACCTACAACGCCTA                 >  3:178963/1‑149                                                                                                          TAGCCGATGTGGCGTCACTGCGTCGGCAGATCGGCTACCGCCAGGTCAGCACCGTCGGGCAATACCCGCCCCCGCTCAGGTGAGTACAGCCGCTGAATCAAGCGTGTCAGCGTGCTCTTGCCTGACCCCGAGCGACCTACAACGC                    <  7:154904/145‑1                                                                                                          TAGCCGATGTGGCGTCACTGCGTCGGCAGATCGGCTACCGCCAGGTCAGCACCGTCGGGCAATACCCGCCCCCGCTCAGGTGAGTACAGCCGCTGAATCAAGCGTGTCAGCGTGCTCTTGCCTGACCCCGAGCGACCTACAACGC                    >  8:154904/1‑145                                                                                                                        TCACTGCGTCGGCAGATCGGCTACCGCCAGGTCAGCACCGTCGGGCAATACCCGCCCCCGCTCAGGTGAGTACAGCCGCTGAATCAAGCGTGTCAGCGTGCTCTTGCCTGACCCCGAGCGACCTACAACGCCTATCACTTCTCCGGCGG  <  4:178963/149‑1                                                                                                                                       ATCGGCTACCGCCAGGTCAGCACCGTCGGGCAATACCCGCCCCCGCTCAGGTGAGTACAGCCGCTGAATCAAGCGTGTCAGCGTGCTCTTGCCTGACCCCGAGCGACCTACAACGCCTATCACTT           <  7:144791/125‑1                                                                                                                                       ATCGGCTACCGCCAGGTCAGCACCGTCGGGCAATACCCGCCCCCGCTCAGGTGAGTACAGCCGCTGAATCAAGCGTGTCAGCGTGCTCTTGCCTGACCCCGAGCGACCTACAACGCCTATCACTT           >  8:144791/1‑125                                                                                                                                       ATCGGCTACCGCCAGGTCAGCACCGTCGGGCAATACCCGCCCCCGCTCAGGTGAGTACAACCGCTGAATCAAGCGTGTCAGCGTGCTCTTGCCTGACCCCGAGCGACCTACAACGCCTATCACTT           <  5:182069/125‑1                                                                                                                                       ATCGGCTACCGCCAGGTCAGCACCGTCGGGCAATACCCGCCCCCGCTCAGGTGAGTACAACCGCTGAATCAAGCGTGTCAGCGTGCTCTTGCCTGACCCCGAGCGACCTACAACGCCTATCACTT           >  6:182069/1‑125                                                                                                                                                                                                                                                                              TTGTAGGTCGCTCGGGGTCAGGCAAGAGCACGCTGACACGCTTGATTCAGCGGCTGTACTCACCTGAGCGGGGGCGGGTATTGCCCGACGGTGCTGACCTGGCGGTAGCCGATGTGGCGTCACTGCGTCGGCAGATCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5606577‑5606438 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcggcTACCGCCAGGTCAGCACCGTCGGGCAATACCCGCCCCCGCTCAGGTGAGTACAGCCGCTGAATCAAGCGTGTCAGCGTGCTCTTGCCTGACCCCGAGCGACCTACAACGCCTATCACTTCTCCGGCGG  >  NC_002947/5606471‑5606598

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.