New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5724564 =58 (1.080)3 (0.060) 3/252 NT 5.3% coding (2402/2574 nt) opgH glucans biosynthesis glucosyltransferase H
?NC_002947 5724610 = 52 (1.010)coding (2356/2574 nt) opgH glucans biosynthesis glucosyltransferase H

CGGGCCGTGGTCGACCCGCGGCAGAATGCCCTGGCCTGTGCCATGGCCACTGCCCGCCATGGCCAGGCGGCACCGATCGAAGCGTTGCGTGCCGAGCGCGTTGCCAAGGCGATTGAAGTCGGGCCGAAAGGCCTGGACCTCAATACTCGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5724715‑5724564
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgcctTGGCAACGCGCTCGGCACGCAACGCTTCGATCGGTGCCGCCTGGCCATGGCGGGCAGTGGCCATGGCACAGGCCAGGGCATTCTGCCGCGGGTCGACCACGGCCCGCACGAAGCCATCATGCAGGGCATGCCAGCGGTTTTCG  >  NC_002947/5724610‑5724752
                                                                                                                                                                                                                                                                                                       
CGGGCCGTGGTCGACCCGCGGCAGAATGCCCTGGCCTGTGCCATGGCCACTGCCCGCCATGGCCAGGCGGCACCGATCGAAGCGTTGCGTGCCGAGCGCGTTGCCAAGGCGATTGAAGTCGGGCCGAAAGGCCTGGAGCTCAATACTCG                                                                                                                                                    >  8:288379/1‑149
 GGGCCGTGGTCGACCCGCGGCAGAATGCCCTGGCCTGTGCCATGGCCACTGCCCGCCATGGCCAGGCGGCACCGATCGAAGCGTTGCGTGCCGAGCGCGTTGCCAAGGCGATTGAAGTCGGGCCGAAAGGCCTGGACCTCAATACTCGC                                                                                                                                                   >  6:42886/1‑149
  GGCCGTGGTCGACCCGCGGCAGAATGCCCTGGCCTGTGCCATGGCCACTGCCCGCCATGGCCAGGCGGCGCCGATCGAAGCGTTGCGTGCCGAGCGCGTTGCCAAGGCGATTGAAGTCGGGCCGAAAGGCCTGGACCTCAATACTCGCC                                                                                                                                                  <  2:23957/149‑1
   GCCGTGGTCGACCCGCGGCAGAATGCCCTGGCCTGTGCCATGGCCACTGCCCGCCATGGCCAGGCGGCACCGATCGAAGCGTTGCGTGCCGAGCGCGTTGCCAAGGCGATTGAAGTCGGGCCGAAAGGCCTGGACCTCAATACTCGCCT                                                                                                                                                 >  5:49124/1‑149
                                                                                                   GTTGCCAAGGCGATTGAAGTCGGGCCGAAAGGCCTGGACCTCAATACTCGCCTTGGCAACGCGCTCGGCACGCAACGCTTCGATCGGTGCCGCCTGGCCATGGCGGGCAGTG                                                                                      <  3:60952/112‑1
                                                                                                   GTTGCCAAGGCGATTGAAGTCGGGCCGAAAGGCCTGGACCTCAATACTCGCCTTGGCAACGCGCTCGGCACGCAACGCTTCGATCGGTGCCGCCTGGCCATGGCGGGCAGTG                                                                                      >  4:60952/1‑112
                                                                                                       CCAAGGCGATTGAAGTCGGGCCGAAAGGCCTGGACCTCAATACTCGCCTTGGCAACGCGCTCGGCACGCAACGCTTCGATCGGTGCCGCCTGGCCATGGCGGGCAGTGGCCATGGCACAGGCCAGGGCATTCTGCCGCGGGTCGACCAC                                             >  7:251374/1‑149
                                                                                                                                                  TCGCCTTGGCAACGCGCTCGGCACGCAACGCTTCGATCGGTGCCGCCTGGCCATGGCGGGCAGTGGCCATGGCACAGGCCAGGGCATTCTGCCGCGGGTCGACCACGGCCCGCACGAAGCCATCATGCAGGGCATGCCAGCGGTTTTCG  >  7:230606/1‑149
                                                                                                                                                                                                                                                                                                       
CGGGCCGTGGTCGACCCGCGGCAGAATGCCCTGGCCTGTGCCATGGCCACTGCCCGCCATGGCCAGGCGGCACCGATCGAAGCGTTGCGTGCCGAGCGCGTTGCCAAGGCGATTGAAGTCGGGCCGAAAGGCCTGGACCTCAATACTCGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5724715‑5724564
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgcctTGGCAACGCGCTCGGCACGCAACGCTTCGATCGGTGCCGCCTGGCCATGGCGGGCAGTGGCCATGGCACAGGCCAGGGCATTCTGCCGCGGGTCGACCACGGCCCGCACGAAGCCATCATGCAGGGCATGCCAGCGGTTTTCG  >  NC_002947/5724610‑5724752

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.