New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5755484 | 52 (0.970) | 3 (0.060) | 3/248 | NT | 5.4% | coding (598/1437 nt) | glnG | two‑component system DNA‑binding response regulator GlnL/GlnG |
? | NC_002947 | = 5755518 | 57 (1.130) | coding (632/1437 nt) | glnG | two‑component system DNA‑binding response regulator GlnL/GlnG |
AGGTGTTCCGCGCCATCGGCCGCCTCAGCCACTCCAACATCACCGTGCTGATCAACGGCGAGTCCGGCACCGGCAAAGAACTGGTGGCCCACGCCCTGCACCGGCACAGCCCACGCGCAGCATCCCCGTTCATTGCCCTGAACATGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5755335‑5755484 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catggccgAACAGCTCCGACTCCATCAAGTCCTTGGGGATGGCGGCCATGTTCAGGGCAATGAACGGGGATGCTGCGCGTGGGCTGTGCCGGTGCAGGGCGTGGGCCACCAGTTCTTTGCCGGTGCCGGACTCGCCGTTGATCAGCACGGT < NC_002947/5755518‑5755376 AGGTGTTCCGCGCCATCGGCCGCCTCAGCCACTCCAACATCACCGTGCTGATCAACGGCGAGTCCGGCACCGGCAAAGAACTGGTGGCCCACGCCCTGCACCGGCACAGCCCCCGCGCAGCATCCCCGGTCATTGCCCTGAACCTGGCC > 8:271040/1‑149 ATCAACGGCGAGTCCGGCACCGGCAAAGAACTGGTGGCCCACGCCCTGCACCGGCACAGCCCACGCGCAGCATCCCCGTTCATTGCCCTGAACATGGCCGAACAGCTCCGACTCCATCAAGTCCTTGGGGATGGCGGCCATGTTCAG < 5:193834/147‑1 GAGTCCGGCACCGGCAAAGAACTGGTGGCCCACGCCCTGCACCGGCACAGCCCACGCGCAGCATCCCCGTTCATTGCCCTGAACATGGCCGAACAGCTCCGACTCCATCAAGTCCTTGGGGATGGCGGCCATGTTCAGG > 1:285415/1‑139 GAGTCCGGCACCGGCAAAGAACTGGTGGCCCACGCCCTGCACCGGCACAGCCCACGCGCAGCATCCCCGTTCATTGCCCTGAACATGGCCGAACAGCTCCGACTCCATCAAGTCCTTGGGGATGGCGGCCATGTTCAGG < 2:285415/139‑1 CATGGCCGAACAGCTCCGACTCCATCAAGTCCTTGGGGATGGCGGCCATGTTCAGGGCAATGAACGGGGATGCTGCGCGTGGGCTGTGCCGGTGCAGGGCGTGGGCCACCAGTTCTTTGCCGGTGCCGGACTCGCCGTTG > 3:308601/1‑140 CATGGCCGAACAGCTCCGACTCCATCAAGTCCTTGGGGATGGCGGCCATGTTCAGGGCAATGAACGGGGATGCTGCGCGTGGGCTGTGCCGGTGCAGGGCGTGGGCCACCAGTTCTTTGCCGGTGCCGGACTCGCCGTTG < 4:308601/140‑1 TGGCCGAACAGCTCCGACTCCATCAAGTCCTTGGGGATGGCGGCCATGTTCAGGGCAATGAACGGGGATGCTGCGCGTGGGCTGTGCCGGTGCAGGGCGTGGGCCACCAGTTCTTTGCCGGTGCCGGACTCGCCGTTGATCAGCACGGT < 1:137901/149‑1 TGGCCGAACAGCTCCGACTCCATCAAGTCCTTGGGGATGGCGGCCATGTTCAGGGCAATGAACGGGGATGCTGCGCGTGGGCTGTGCCGGTGCAGGGCGTGGGCCACCAGTTCTTTGCCGGTGCCGGACTCGCCGTTGATCAGCACGGT > 5:203169/1‑149 AGGTGTTCCGCGCCATCGGCCGCCTCAGCCACTCCAACATCACCGTGCTGATCAACGGCGAGTCCGGCACCGGCAAAGAACTGGTGGCCCACGCCCTGCACCGGCACAGCCCACGCGCAGCATCCCCGTTCATTGCCCTGAACATGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5755335‑5755484 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catggccgAACAGCTCCGACTCCATCAAGTCCTTGGGGATGGCGGCCATGTTCAGGGCAATGAACGGGGATGCTGCGCGTGGGCTGTGCCGGTGCAGGGCGTGGGCCACCAGTTCTTTGCCGGTGCCGGACTCGCCGTTGATCAGCACGGT < NC_002947/5755518‑5755376 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |