| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5783553 = | 55 (1.020) | 4 (0.080) | 4/250 | NT | 6.6% | coding (2028/3309 nt) | kefA | intermediate mechanosensitive channel protein |
| ? | NC_002947 | 5783596 = | 62 (1.220) | coding (2071/3309 nt) | kefA | intermediate mechanosensitive channel protein | |||||
ACGAAGGCGGCTTCGATCACCAACCAGAACAGCAGCAGGTACAGGGTGTAGATGAGTCGATCGGTAAGCTTCAGTGCCGTGTAGTAGTAGCCGAAGCACACGGCGACGAACAGGGCGATGGGCAGGGCGGTGAACGCTACCCCCACCGCCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5783705‑5783553‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccctgTTCGTCGCCGTGTGCTTCGGCTACTACTACACGGCACTGAAGCTTACCGATCGACTCATCTACACCCTGTACCTGCTGCTGTTCTGGTTGGTGATCGAAGCCGCCTTCGTGCGCGGCCTGTCGGTGGCTGCACGGCGCCTGG > NC_002947/5783596‑5783737 ACGAAGGCGGCTTCGATCACCAACCAGAACAGCAGCAGGTACAGGGTGTAGATGAGTCGATCGGTAAGCTTCAGTGCCGTGTAGTAGTAGCCGAAGCACACGGCGACGAACAGGGCGATGGGCAGGGCGGTGAACGCTACCCCCACCGC > 5:21264/1‑149 AGGCGGCTTCGATCACCAACCAGAACAGCAGCAGGTACAGGGTGTAGATGAGTCGATAGGTAAGCTTCAGTGCAGTGTAGTAGTAGCCGAAGCACACGGCGACGAACAGGGCGATGGGCAGGGCGGTGAACGCTACCCCCACCGCCCTG > 1:210067/1‑149 AACAGGGCGATGGGCAGGGCGGTGAACGCTACCCCCACCGCCCTGTTCGTCGCCGTGTGCTTCGGCTACTACTACACGGCACTGAAGCTTACCGATCGACTCATCTACACCCTGTACCTGCTGCTGTTCTGGTTGGTGATCGAAGCCGC > 8:250742/1‑149 ACAGGGCGATGGGCAGGGCGGTGAACGCTACCCCCACCGCCCTGTTCGTCGCCGTGTGCTTCGGCTACTACTACACGGCACTGAAGCTTACCGATCGACTCATCTACACCCTGTACCTGCTGCTGTTCTGGT < 5:122358/132‑1 ACAGGGCGATGGGCAGGGCGGTGAACGCTACCCCCACCGCCCTGTTCGTCGCCGTGTGCTTCGGCTACTACTACACGGCACTGAAGCTTACCGATCGACTCATCTACACCCTGTACCTGCTGCTGTTCTGGT > 6:122358/1‑132 CGGTGAACGCTACCCCCACCGCCCTGTTCGTCGCCGTGTGCTTCGGCTACTACTACACGGCACTGAAGCTTACCGATCGACTCATCTACACCCTGTACCTGCTGCTGTTCTGGTTGGTGATCGAAGCCGCCTTCGTGCGCGGCCTGTCG < 7:250742/149‑1 GCCCTGTTCGTCGCCGTGTGCTTCGGCTACTACTACACGTCACTGAAGCTTACCGATCGACTCATCTACACCCTGTACCTGCTGCTGTTCTGGTTGGTGATCGAAGCCGCCTTCGTGCGCGGCCTGTCGGTGGCTGCACGGCGCCTGG < 6:284986/148‑1 TGTTCGTCGCCGTGTGCTTCGGCTACTACTACACGGCACTGAAGCTTACCGATCGACTCATCTACACCCTGTACCTGCTGCTGTTCTGGTTGGTGATCGAAGCCGCCT > 5:269767/1‑108 TGTTCGTCGCCGTGTGCTTCGGCTACTACTACACGGCACTGAAGCTTACCGATCGACTCATCTACACCCTGTACCTGCTGCTGTTCTGGTTGGTGATCGAAGCCGCCT < 6:269767/108‑1 ACGAAGGCGGCTTCGATCACCAACCAGAACAGCAGCAGGTACAGGGTGTAGATGAGTCGATCGGTAAGCTTCAGTGCCGTGTAGTAGTAGCCGAAGCACACGGCGACGAACAGGGCGATGGGCAGGGCGGTGAACGCTACCCCCACCGCCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5783705‑5783553‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccctgTTCGTCGCCGTGTGCTTCGGCTACTACTACACGGCACTGAAGCTTACCGATCGACTCATCTACACCCTGTACCTGCTGCTGTTCTGGTTGGTGATCGAAGCCGCCTTCGTGCGCGGCCTGTCGGTGGCTGCACGGCGCCTGG > NC_002947/5783596‑5783737 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |