New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5921192 =	56 (1.040)	4 (0.080)	4/254	NT	7.0%	coding (16/315 nt)	PP_5191	hypothetical protein
	?	NC_002947	5921242 =	53 (1.020)					coding (66/315 nt)	PP_5191	hypothetical protein

GTCATCCTGCGCGGCCACTACCAGCTTGTGATCCCGCGAGGTCAGGTAGCTCGACGCCGTGGTAGCACCGGAAGTCATCACGTTACGCCAGAAGGTATCGGCCATGGCCGAGCCAAGAGGCAGCGAAAGCAAGGTAGCGGCGGCAATGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5921341‑5921192 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggcCGATACCTTCTGGCGTAACGTGATGACTTCCGGTGCTACCACGGCGTCGAGCTACCTGACCTCGCGGGATCACAAGCTGGTAGTGGCCGCGCAGGATGACGCCAGCAGCTTCGTCGCCAGCGAAGGCGCGATCCGCGGGCCGTTCCT  >  NC_002947/5921242‑5921388                                                                                                                                                                                                                                                                                                           GTCATCCTGCGCGGCCACTACCAGCTTGTGATCCCGCGAGGTCAGGTAGCTCGACGCCGTGGTAGCACCGGAAGTCATCACGTTACGCCAGAAGGTATCGGCCATGGCCGAGCCAAGAGGCAGCGAAAGCAAGGTAGCGGCGGCAATGG                                                                                                                                                      >  2:5593/1‑149  TCATCCTGCGCGGCCACTACCAGCTTGTGATCCCGCGAGGTCAGGTAGCTCGACGCCGTGGTAGCACCGGAAGTCATCACGTTACGCCAGAAGGTATCGGCCATGGCCGAGCCAAGAGGCAGCGAAAGCAAGGTAGCGGCGGCAATGGC                                                                                                                                                     >  1:56253/1‑149                                                                                                   CGGCCATGGCCGAGCCAAGAGGCAGCGAAAGCAAGGTAGCGGCGGCAATGGCCGATACCTTCTGGCGTAACGTGATGACTTCCGGTGCTACCACGGCGTCGAGCTACCTGACCTCGCGGGATCACAAGCTGGTAGTGGCCGCGCAGGAT                                                    >  1:164153/1‑149                                                                                                      CCATGTCCGAGCCAAGAGGCAGCGAAAGCAAGGTAGCGGCGGCAATGGCCGATACCTTCTGGCGTAACGTGATGACTTCCGGTGCTACCACGGCGTCGAGCTACCTGACCTCGCGGGATCACAAGCTGGT                                                                    <  5:173567/130‑1                                                                                                      CCATGGCCGAGCCAAGAGGCAGCGAAAGCAAGGTAGCGGCGGCAATGGCCGATACCTTCTGGCGTAACGTGATGACTTCCGGTGCTACCACGGCGTCGAGCTACCTGACCTCGCGGGATCACAAGCTGGTAGTGGCCGCGCAGGATGAC                                                 <  2:164153/149‑1                                                                                                          GGCCGAGCCAAGAGGCAGCGAAAGCAAGGTAGCGGCGGCAATGGCCGATACCTTCTGGCGTAACGTGATGACTTCCGGTGCTACCACGGCGTCGAGCTACCTGACCTCGCGGGATCACAAGCTGGTAGTGGCCGCGCAGGATGACGCCA                                             >  7:47623/1‑149                                                                                                                                                     GCCGATACCTTCTGGCGTAACGTGATGACTTCCGGTGCTACCACGGCGTCGAGCTACCTGACCTCGCGGGATCACAAGCTGGTAGTGGCCGCGCAGGATGACGCCAGCAGCTTCGTCGCCAGCGAAGGCGCGATCCGCGGGCCGTTCCT  <  1:561/149‑1                                                                                                                                                     GCCGATACCTTCTGGCGTAACGTGATGACTTCCGGTGCTACCACGGCGTCGAGCTACCTGACCTCGCGGGATCACAAGCTGGTAGTGGCCGCGCAGGATGACGCCAGCAGCTTCGTCGCCAGCGAAGGCGCGATCCGCGGGCCGTTCCT  <  8:229763/149‑1                                                                                                                                                                                                                                                                                                           GTCATCCTGCGCGGCCACTACCAGCTTGTGATCCCGCGAGGTCAGGTAGCTCGACGCCGTGGTAGCACCGGAAGTCATCACGTTACGCCAGAAGGTATCGGCCATGGCCGAGCCAAGAGGCAGCGAAAGCAAGGTAGCGGCGGCAATGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5921341‑5921192 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggcCGATACCTTCTGGCGTAACGTGATGACTTCCGGTGCTACCACGGCGTCGAGCTACCTGACCTCGCGGGATCACAAGCTGGTAGTGGCCGCGCAGGATGACGCCAGCAGCTTCGTCGCCAGCGAAGGCGCGATCCGCGGGCCGTTCCT  >  NC_002947/5921242‑5921388

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.