| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6021803 = | 53 (0.980) | 4 (0.080) | 4/252 | NT | 7.3% | coding (11/1293 nt) | PP_5273 | oxidoreductase |
| ? | NC_002947 | 6021845 = | 51 (0.990) | coding (53/1293 nt) | PP_5273 | oxidoreductase | |||||
ACGCTCGGCCAGCTCGATGGCGGTGTTCAGGCCCGAGTAGCCGCCGCCGATGATGCACACGTCGGCGTTGTGTTCGCCTTGCAGGTAGGCGTGGTCGGGGTGTGGCGCGCTGCTGGCGGCGTAATAGGAGGCGGCGTGCTGCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6021948‑6021803‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgcCACACCCCGACCACGCCTACCTGCAAGGCGAACACAACGCCGACGTGTGCATCATCGGCGGCGGCTACTCGGGCCTGAACACCGCCATCGAGCTGGCCGAGCGTGGTTTCTCGGTCATCCTGCTGG > NC_002947/6021845‑6021970 ACGCTCGGCCAGCTCGATGGCGGTGTTCAGGCCCGAGTAGCCGCCGCCGATGATGCACACGTCGGCGTTGTGTTCGCCTTGCAGGTAGGCGTGGTCGGGGTGTGGCGCGCTGCTGGCGGCGTAATAGGAGGCGGCGTGCTGCGC < 6:200538/144‑1ACGCTCGGCCAGCTCGATGGCGGTGTTCAGGCCCGAGTAGCCGCCGCCGATGATGCAAACGTCGGCGTTGTGTTCGCCTTGCAGGTAGGCGTGGTCGGGGTGTGGCGCGCTGCTGGCGGCGTAATAGGAGGCGGCGTGCTGCGC > 5:200538/1‑144 CGCGCTGCTGGCGGCGTAATAGGAGGCGGCGTGCTGCGCGCCACACCCCGACCACGCCTACCTGCAAGGCGAACACAACGCCGACGTGTGCATCATCGGCGGCGGCTACTCGGGCCTGAACACCGCCATCGAGCTGGC < 7:145290/138‑1 CGCGCTGCTGGCGGCGTAATAGGAGGCGGCGTGCTGCGCGCCACACCCCGACCACGCCTACCTGCAAGGCGAACACAACGCCGACGTGTGCATCATCGGCGGCGGCTACTCGGGCCTGAACACCGCCATCGAGCTGGC > 8:145290/1‑138 GCGCTGCTGGCGGCGTAATAGGAGGCGGCGTGCTGCGCGCCACACCCCGACCACGCCTACCTGCAAGGCGAACACAACGCCGACGTGTGCATCATCGGCGGCGGCTACTCGGGCCTGAACACCGCCATCGAGCTGGCCGAGCGTGGTTT > 3:248462/1‑149 ATAGGAGGCGGCGTGCTGCGCGCCACACCCCGACCACGCCTACCTGCAAGGCGAACACAACGCCGACGTGTGCATCATCGGCGGCGGCTACTCGGGCCTGAACACCGCCATCGAGCTGGCCGAGCGTGGTTTCTCGGTCATCCTGCTGG < 4:248462/149‑1 ACGCTCGGCCAGCTCGATGGCGGTGTTCAGGCCCGAGTAGCCGCCGCCGATGATGCACACGTCGGCGTTGTGTTCGCCTTGCAGGTAGGCGTGGTCGGGGTGTGGCGCGCTGCTGGCGGCGTAATAGGAGGCGGCGTGCTGCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6021948‑6021803‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgcCACACCCCGACCACGCCTACCTGCAAGGCGAACACAACGCCGACGTGTGCATCATCGGCGGCGGCTACTCGGGCCTGAACACCGCCATCGAGCTGGCCGAGCGTGGTTTCTCGGTCATCCTGCTGG > NC_002947/6021845‑6021970 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |