New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 6060444 | 54 (1.000) | 6 (0.120) | 6/236 | NT | 9.8% | intergenic (+80/+101) | PP_5311/PP_5312 | signal transduction protein/hypothetical protein |
? | NC_002947 | = 6060503 | 62 (1.290) | intergenic (+139/+42) | PP_5311/PP_5312 | signal transduction protein/hypothetical protein |
GGCCGAGGATGTGGTGAACAAGGTGCTCGAGGCCGAGAACCTGTTGCGTGAGCTGGCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6060283‑6060444 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtgggagcgggcGTGCCCGCGAA‑ACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGT‑‑TCGCGGGCAAGCCCGCTCCCACAGTCCAAAATCGCGCCAGCTGTTAGAAATTGAGCAAGACAGTTGCTCCCGCAGGCTATGTGTTAATGCTTAATGC < NC_002947/6060503‑6060358 GGCCGAGGATGTGGTGAACAAGGTGCTCGAGGCCGAGAACCTGTTGCGTGAGCTGGCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGAC > 2:31612/1‑149 GAGGATGTGGTGAACAAGGTGCTCGAGGCCGAGAACCTGTTGCGTGAGCTGGCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTG > 5:34823/1‑149 GATGTGGTGAACAAGGTGCTCGAGGCCGAGAACCTGTTGCGTGAGCTGGCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGA < 8:188592/149‑1 GTGGTGAACAAGGTGCTCGAGGCCGAGAACCTGTTGCGTGAGCTGGCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCG > 4:235587/1‑149 GGTGAACAAGGTGCTCGAGGCCGAGAACCTGTTGCGTGAGCTGGCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGG < 8:188216/149‑1 GTGAACAAGGTGCTCGAGGCCGAGAACCTGTTGCGTGAGCTGGCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGC < 4:159301/149‑1 TTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGG > 4:156673/1‑98 CAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGACGCGGTGCATGGCACCGGCTTCGCCGGT < 1:264645/149‑1 TTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCGTGCCCGCGAA‑ACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGT‑‑TC < 2:94450/149‑1 CATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCGTGCCCGCGAA‑ACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGT‑‑TCGCG > 7:85239/1‑149 ACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCGTGCCCGCGAA‑ACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGT‑‑TCGCGGGCAAGCCCGCTCCCACAGT < 8:85239/148‑1 GCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCGTGCCCGCGAA‑ACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGT‑‑TCGCGGGCAAGC < 2:140679/118‑1 GCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCGTGCCCGCGAA‑ACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGT‑‑TCGCGGGCAAGC > 1:140679/1‑118 GGGAGCGGGCGTGCCCGCGAA‑ACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTAGGCGCGGGCAAGCCCGCTCCCACAGTCCAAAATCGCGCCAGCTGTTAGAAATTGAGCAAGACAGTTGCTCCCGCAGGCTATGTGTTAAT > 1:267252/1‑149 GGAGCGGGCGTGCCCGCGAA‑ACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGT‑‑TCGCGGGCAAGCCCGCTCCCACAGTCCAAAATCGCGCCAGCTGTTAGAAATTGAGCAAGACAGTTGCTCCCGCAGGCTATGTGTTAATGCT > 5:226706/1‑149 GGAGCGGGCGTGCCCGCGAA‑ACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGT‑‑TCGCGGGCAAGCCCGCTCCCACAGTCCAAAATCGCGCCAGCTGTTAGAAATTGAGCAAGACAGTTGCTCCCGCAGGCTATGTGTTAATGCT > 5:98465/1‑149 GGAGCGGGCGTGCCCGCGAA‑ACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGT‑‑TCGCGGGCAAGCCCGCTCCCACAGTCCAAAATCGCGCCAGCTGTTAGAAATTGAGCAAGACAGTTGCTCCCGCAGGCTATGTGTTAATGC < 6:211129/148‑1 GGCGTGCCCGCGAA‑ACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGT‑‑TCGCGGGCAAGCCCGCTCCCACAGTCCAAAATCGCGCCAGCTGTTAGAAATTGAGCAAGACAGTTGCTCCCGCAGGCTATGTGTTAATGaatgggt > 1:121425/1‑141 GGCGTGCCCGCGAA‑ACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGT‑‑TCGCGGGCAAGCCCGCTCCCACAGTCCAAAATCGCGCCAGCTGTTAGAAATTGAGCAAGACAGTTGCTCCCGCAGGCTATGTGTTAATGCTTAATGC > 6:215888/1‑149 GGCGTGCCCGCGAA‑ACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGT‑‑TCGCGGGCAAGCCCGCTCCCACAGTCCAAAATCGCGCCAGCTGTTAGAAATTGAGCAAGACAGTTGCTCCCGCAGGCTATGTGTTAAT < 2:121425/140‑1 GGCCGAGGATGTGGTGAACAAGGTGCTCGAGGCCGAGAACCTGTTGCGTGAGCTGGCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6060283‑6060444 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtgggagcgggcGTGCCCGCGAA‑ACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGT‑‑TCGCGGGCAAGCCCGCTCCCACAGTCCAAAATCGCGCCAGCTGTTAGAAATTGAGCAAGACAGTTGCTCCCGCAGGCTATGTGTTAATGCTTAATGC < NC_002947/6060503‑6060358 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |