New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 209901	NA (NA)	3 (0.060)	3/250	NT	51.4%	coding (15407/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	= 209956	3 (0.060)					coding (15462/26049 nt)	PP_0168	putative surface adhesion protein

GCGCTAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAGGTCACC  >  NC_002947/209802‑209956                                                                                                    |                                                        gcgcTAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAG        >  5:169657‑M2/1‑149 (MQ=255)       aCGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAATTTCGAACATCTTACGCTGGACAAGACGCCGGTTAGCACGTCGGTGACCGACGAGCCAGGTACGCCGGGCAACTAAGGCGACTTGGTCAAGGTCACC  >  7:210006‑M2/1‑149 (MQ=255)       aCGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAGGTCACC  >  1:202742‑M2/1‑149 (MQ=255)       aCGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAGGTCACC  >  5:86157‑M2/1‑149 (MQ=255)       aCGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAGGTCAC   <  2:298116‑M2/148‑1 (MQ=255)       aCGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAGGTCA    >  4:218023‑M2/1‑147 (MQ=255)                                                                                                    |                                                        GCGCTAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAGGTCACC  >  NC_002947/209802‑209956

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.