New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 682009 =46 (0.850)4 (0.080) 4/256 NT 8.5% coding (1264/1944 nt) PP_0584 methyl‑accepting chemotaxis transducer
?NC_002947 682041 = 42 (0.800)coding (1232/1944 nt) PP_0584 methyl‑accepting chemotaxis transducer

TCCAGCTGTTGGATCGACTGGGCCGATTGCTCGATTTCGTGGCTAAGGCGATCAACGCTGTGTACCGCCGCATCGATCTGCTGCTGCCCTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGCTGAGGATCTTGCTGGC  >  NC_002947/681861‑682147
                                                                                                                                                    |                                                                                                                                          
tCCAGCTGTTGGATCGACTGGGCCGATTGCTCGATTTCGTGGCTAAGGCGATCAACGCTGTGTACCGCCGCATCGATCTGCTGCTTCCCTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCAGCCTGGCTGCAGGACCGTGc                                                                                                                                            >  3:99050/1‑149 (MQ=255)
tCCAGCTGTTGGATCGACTGGGCCGATTGCTCGATTTCGTGGCTAAGGCGATCAACGCTGTGTACCGCCGCATCGATCTGCTGCTGCCCTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGc                                                                                                                                            >  4:216252/1‑149 (MQ=255)
 ccAGCTGTTGGATCGACTGGGCCGATTGCTCGATTTCGTGGCTAAGGCGATCAACGCTGTGTACCGCCGCATCGATCTGCTGCTGCCCTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGc                                                                                                                                            >  6:154592/1‑148 (MQ=255)
 ccAGCTGTTGGATCGACTGGGCCGATGGCTCGATTTCGTGGCTAAGGCGATCAACGCTGTGTACCGCCGCATCGATCTGCTGCTGCCCTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGc                                                                                                                                            >  1:8274/1‑148 (MQ=255)
  ggtgccattcgcagcctgatccagcacatcggcactgctgccagcaagatcctcagcacgtccagcagctcgacccgcgtctccagtgacatggccgaggcggccggccgccagcgcgaagccgtggacatggtttccaccgcattc                                                                                                                                            >  2:261565‑M1/147‑147 (MQ=255)
   gtgccattcgcagcctgatccagcacatcggcactgctgccagcaagatcctcagcacgtccagcagctcgacccgcgtctccagtgacatggccgaggcggccggccgccagcgcgaagccgtggacatggtttccaccgcattCCAc                                                                                                                                         >  3:163237‑M1/146‑149 (MQ=255)
    gCTGTTGGATCGACTGGGCCGATTGCTCGATTTCGTGGCTAAGGCGATCAACGCTGTGTACCGCCGCATCGATCTGCTGTTGCCCTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACt                                                                                                                                        <  6:26735/149‑1 (MQ=255)
             tCGACTGTGCCGATTGCTCTATTTCGTGGCTAAGGAGATCAATGCTGTGTACCGCAGCATCTATCTGCTGCTGCCCTTCGCGGGCCTGCTTCTTGCCTATATCGGACGACTTCTCCGGGTGTATGCTGGACCGTGCGTCTTCATTGGc                                                                                                                                <  4:99050/148‑1 (MQ=255)
                cctgatccagcacatcggcactgctgccagcaagatcctcagcacgtccagcagctcgacccgcgtctccagtgacatggccgaggcggccggccgccagcgcgaagccgtggacatggtttccaccgcattCCACTTCATTGGCGGTg                                                                                                                            <  1:16963‑M1/17‑1 (MQ=255)
                aCTGGGCCGATTGCTCGATTTCGTGGCTAAGGCGATCAACGCTGTGTACCGCCGCATCGATCTGCTGCTGCCCTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTg                                                                                                                            >  7:217375/1‑149 (MQ=255)
                    ggCCGATTGCTCGATTTCGTGGCTAAGGCGATCAACGCTGTGTACCGCCGCATCGATCTGCTGCTGCCCTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGc                                                                                                                          <  8:217375/147‑1 (MQ=255)
                            gCTCGATTTCGTGGCTAAGGCGATCAACGCTGTGTACCGCCGCATCGATCTGCTGCTGCCCTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTc                                                                                                                 <  7:78957/148‑1 (MQ=255)
                              tCGATTTCGTGGCTAAGGCGATCAACGCTGTGTACCGCCGCATCGATCTGCTGCTGCCCTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTg                                                                                                              >  2:1622/1‑149 (MQ=255)
                               cGATTTCGTGGCTAAGGCGATCAACGCTGTGTACCGCCGCATCGATCTGCTGCTGCCCTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTg                                                                                                              >  2:91555/1‑148 (MQ=255)
                                  cactgctgccagcaagatcctcagcacgtccagcagctcgacccgcgtctccagtgacatggccgaggcggccggccgccagcgcgaagccgtggacatggtttccaccgcattCCACTTCATTGGCGGTGGCGACCATTTCGTGGAAt                                                                                                          >  2:16963‑M1/115‑149 (MQ=255)
                                    tCGTGGCTAAGGCGATCAACGCTGTGTACCGCCGCATCGATCTGCTGCTGCCCTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGc                                                                                                        >  3:228282/1‑149 (MQ=255)
                                    tCGTGGCTAAGGCGATCAACGCTGTGTACCGCCGCATCGATCTGCTGCTGCCCTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGc                                                                                                        >  3:105992/1‑149 (MQ=255)
                                      gTGGCTAAGGCGATCAACGCTGTGTACCGCCGCATCGATCTGCTGCTGCCCTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCg                                                                                                       <  7:259113/148‑1 (MQ=255)
                                         gCTAAGGCGATCAACGCTGTGTACCGCCGCATCGATCTGCTGCTGCCCTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTg                                                                                                    <  4:228282/148‑1 (MQ=255)
                                           tAAGGCGATCAACGCTGTGTACCGCCGCATCGATCTGCTGCTGCCCTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGa                                                                                                  >  6:94295/1‑148 (MQ=255)
                                           cagcaagatcctcagcacgtccagcagctcgacccgcgtctccagtgacatggccgaggcggccggccgccagcgcgaagccgtggacatggtttccaccgcattCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTg                                                                                                    <  7:122678‑M1/41‑1 (MQ=255)
                                           cagcaagatcctcagcacgtccagcagctcgacccgcgtctccagtgacatggccgaggcggccggccgccagcgcgaagccgtggacatggtttccaccgcattCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTg                                                                                                    >  8:122678‑M1/106‑146 (MQ=255)
                                             gcaagatcctcagcacgtccagcagctcgacccgcgtctccagtgacatggccgaggcggccggccgccagcgcgaagccgtggacatggtttccaccgcattcc                                                                                                                                           >  3:36702‑M1/104‑105 (MQ=255)
                                             gcaagatcctcagcacgtccagcagctcgacccgcgtctccagtgacatggccgaggcggccggccgccagcgcgaagccgtggacatggtttccaccgcattcc                                                                                                                                           <  4:36702‑M1/2‑1 (MQ=255)
                                              ggCGATCAACGCTGTGTACCGCCGCATCGATCTGCTGCTGCCCTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAAcc                                                                                              <  7:138463/149‑1 (MQ=255)
                                                cGATCAACGCTGTGTACCGCCGCATCGATCTGCTGCTGCCCTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAAccgt                                                                                            <  1:109568/149‑3 (MQ=255)
                                                      aCGCTGTGTACCGCCGCATCGATCTGCTGCTGCCCTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCAt                                                                                                                                    <  6:272380/103‑1 (MQ=255)
                                                      aCGCTGTGTACCGCCGCATCGATCTGCTGCTGCCCTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCAt                                                                                                                                    >  5:272380/1‑103 (MQ=255)
                                                               aCCGCCGCATCGATCTGCTGCTGCCCTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTcgcg                                                                             >  8:187937/1‑149 (MQ=255)
                                                                ccgccgCATCGATCTGCTGCTGCCCTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTcgcg                                                                             <  1:91555/148‑1 (MQ=255)
                                                                   ccgcATCGATCTGCTGCTGCCCTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTgg                                                                         >  4:282446/1‑149 (MQ=255)
                                                                                ctgctgcCCTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCggccggcc                                                                <  3:322236/145‑1 (MQ=255)
                                                                                ctgctgcCCTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCt                                                            >  3:106560/1‑149 (MQ=255)
                                                                                      cccTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCa                                                      >  4:264070/1‑149 (MQ=255)
                                                                                       ccTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCAt                                                     <  3:282446/149‑1 (MQ=255)
                                                                                        cTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCAt                                                     >  4:233979/1‑148 (MQ=255)
                                                                                        cTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCAt                                                     <  3:233979/148‑1 (MQ=255)
                                                                                        cTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATg                                                    >  6:65491/1‑149 (MQ=255)
                                                                                         ttCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGt                                                   >  4:220851/1‑149 (MQ=255)
                                                                                              gggCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTg                                              <  3:216252/149‑1 (MQ=255)
                                                                                                        ctgGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGAcgcg                                      <  7:187937/147‑1 (MQ=255)
                                                                                                            ccGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGa                                <  1:1622/149‑1 (MQ=255)
                                                                                                            ccGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTACACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCAAAGGAGACGCGGGtg                                  >  7:50118/1‑146 (MQ=255)
                                                                                                                 aTCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCggg                                    <  7:204529/140‑1 (MQ=255)
                                                                                                                 aTCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGAGGCCGGCCCCCTCGGCCATGTCACTGGAGCCGCCGGTAGatccg                            >  8:204529/1‑144 (MQ=255)
                                                                                                                  tCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTAGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAgctgct                          >  6:264119/1‑149 (MQ=255)
                                                                                                                    ggCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTgg                        >  6:14149/1‑149 (MQ=255)
                                                                                                                          cTGCGCCGCCTGGCTTCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGc                  <  5:154592/149‑1 (MQ=255)
                                                                                                                          cTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGc                  <  4:105992/149‑1 (MQ=255)
                                                                                                                            gcgcCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGCt                 >  1:121206/1‑148 (MQ=255)
                                                                                                                             cgccgcCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTg                   <  6:64020/145‑1 (MQ=255)
                                                                                                                             cgccgcCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTg                   >  5:64020/1‑145 (MQ=255)
                                                                                                                                cgccTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGCTGAGGa            <  2:8274/149‑1 (MQ=255)
                                                                                                                                cgccTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGCTGAGGa            >  2:80839/1‑149 (MQ=255)
                                                                                                                                 gccTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGCTGAGGAt           <  3:220851/149‑1 (MQ=255)
                                                                                                                                       cTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGCTGAGGATCTTGCt     <  4:106560/149‑1 (MQ=255)
                                                                                                                                          cAGGACCGTGCCACTTCATTGGCGGTAGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGCTGAGGATCTTGCTGgc  <  5:264119/149‑1 (MQ=255)
                                                                                                                                           aGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGt                    <  3:309866/130‑1 (MQ=255)
                                                                                                                                           aGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGt                    >  4:309866/1‑130 (MQ=255)
                                                                                                                                                    |                                                                                                                                          
TCCAGCTGTTGGATCGACTGGGCCGATTGCTCGATTTCGTGGCTAAGGCGATCAACGCTGTGTACCGCCGCATCGATCTGCTGCTGCCCTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGCTGAGGATCTTGCTGGC  >  NC_002947/681861‑682147

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.