New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1948721	44 (0.820)	4 (0.080)	4/256	NT	7.6%	coding (934/1746 nt)	PP_1749	acetyltransferase
	?	NC_002947	= 1948789	54 (1.030)					coding (866/1746 nt)	PP_1749	acetyltransferase

CGCCAGGTTGTCATCGGCATTGCCCGCCAGCTGTTGCGCGGGCACCTGCAGCCCAGCGTTGTGCAGGGCATGCTGGGTCAGGCGTTTGTCCTGGCACAGGGTCAT‑GGTCACGGCACTGGTCAGGTCGCTGAGCGATTCCCGGCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGGCCGCCAGCGGCGTCGTCCACCTGCACTTCGATGCCCCGGCGCAGGGCCTCGTCGACGATGATGCGTGCGTAGGGGTTGAGGTCGGCTTGCGGGCCAGGCCCGAGGAACAGC  >  NC_002947/1948578‑1948869                                                                                                                                                 |                                                                                                                                                     cGCCAGGTTGTCATCGGCATTGCCCGCCAGCTGTTGCGCGGGCACCTGCAGCCCAGCGTTGTGCAGGGCATGCTGGGTCAGTCGTTTGTCCTGGCACAGGGTCAT‑GGTCACGGCACTGGTCAGGTCGCTGAGCGATTCCCGGCAGCGaa                                                                                                                                                 <  5:161115/149‑1 (MQ=255)    cAGGTTGTCATCGGCATTGCCCGCCAGCTGTTGCGCGGGCACCTGCAGCCCAGCGTTGTGCAGGGCATGCTGGGTCAGGCGTTTGTCCTGGCACAGGGTCAT‑GGTCACGGCACTGGTCAGGTCGCTGAGCGATTCCCGGCAGCGAATgc                                                                                                                                              <  6:194363/149‑1 (MQ=255)        ttGTCATCGGCATTGCCCGCCAGCTGTTGCGCGGGCACCTGCAGCCCAGCGTTGTGCAGGGCATGCTGGGTCAGGCGTTTGTCCTGGCACAGGGTCAT‑GGTCACGGCACTGGTCAGGTCGCTGAGCGATTCCCGGCAGCGAATGcgccg                                                                                                                                          >  3:167887/1‑149 (MQ=255)             aTCGGCATTGCCCGCCAGCTGTTGCGCGGGCACCTGCAGCCCAGCGTTGTGCAGGGCATGCTGGGTCAGGCGTTTGTCCTGGCACAGGGTCAT‑GGTCACGGCACTGGTCAGGTCGCTGAGCGATTCCCGGCAGCGAATGCGccgcccgc                                                                                                                                     >  7:146743/1‑149 (MQ=255)              tCGGCATTGCCCGCCAGCTGTTGCGCGGGCACCTGCAGCCCAGCGTTGTGCAGCGCATGCTGGGTCAGGCGTTTGTCCTGGCACAGGGTCAT‑GGTCACGGCACTGGTCAGGTCGCTGAGCGATTCCCGGCAGCGAATGCGCcgcctgcc                                                                                                                                    <  1:279007/149‑1 (MQ=255)                ggCATTGCCCGCCAGCTGTTGCGCGGGCACCTGCAGCCCAGCGTTGTGCAGGGCATGCTGGGTCAGGCGTTTGTCCTGGCACAGGGTCAT‑GGTCACGGCACTGGTCAGGTCGCTGAGCGATTCCCGGCAGCGAATGCGCCgcccgccc                                                                                                                                   <  2:254300/148‑1 (MQ=255)                         cGCCAGCTGTTGCGCGGGCACCTGCAGCCCAGCGTTGTGCAGGGCATGCTGGGTCAGGCGTTTGTCCTGGCACAGGGTCAT‑GGTCACGGCACTGGTCAGGTCGCTGAGCGATTCCCGGCAGCGAATGCGCCGCCCGCCCAGGCTCAggg                                                                                                                         <  4:167887/149‑1 (MQ=255)                         cGCCAGCTGTTGCGCGGGCACCTGCAGCCCAGCGTTGTGCAGGGCATGCTGGGTCAGGCGTTTGTCCTGGCACAGGGTCAT‑GGTCACGGCACTGGTCAGGTCGCTGAGCGATTCCCGGCAGCGAATGCGCCGCCCGCCCAGGCTCAggg                                                                                                                         >  5:320850/1‑149 (MQ=255)                              gCTGTTGCGCGGGCACCTGCAGCCCAGCGTTGTGCAGGGCATGCTGGGTCAGGCGTTTGTCCTGGCACAGGGTCAT‑GGTCACGGCACTGGTCAGGTCGCTGAGCGATTCCCGGCAtcgaagtgcaggtggacgacgccgctggcggcct                                                                                                                    >  3:296959‑M1/1‑115 (MQ=255)                               cTGTTGCGCGGGCACCTGCAGCCCAGCGTTGTGCAGGGCATGCTGGGTCAGGCGTTTGTCCTGGCACAGGGTCAT‑GGTCACGGCACTGGTCAGGTCGCTGAGCGATTCCCGGCAGCGAATgc                                                                                                                                              <  8:181582/122‑1 (MQ=255)                                    gcgcGGGCACCTGCAGCCCAGCGTTGTGCAGGGCATGCTGGGTCAGGCGTTTGTCCTGGCACAGGGTCAT‑GGTCACGGCACTGGTCAGGTCGCTGAGCGATTCCCGGCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGgccg                                                                                                              >  7:158520/1‑149 (MQ=255)                                     cgcgGGCACCTGCAGCCCAGCGTTGTGCAGGGCATGCTGGGTCAGGCGTTTGTCCTGGCACAGGGTCAT‑GGTCACGGCACTGGTCAGGTCGCTGAGCGATTCCCGGCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGgccgc                                                                                                             <  2:106103/149‑1 (MQ=255)                                             ccTGCAGCCCAGCGTTGTGCAGGGCATGCTGGGTCAGGCGTTTGTCCTGGCACAGGGTCAT‑GGTCACGGCACTGGTCAGGTCGCTGAGCGATTCCCGGCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGGCCGCCAgcggcg                                                                                                     >  6:233363/1‑149 (MQ=255)                                               tGCAGCCCAGCGTTGTGCAGGGCATGCTGGGTCAGGCGTTTGTCCTGGCACAGGGTCAT‑GGTCACGGCACTGGTCAGGTCGCTGAGCGATTCCCGGCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGGCCGCCAGCGGcgtc                                                                                                   >  5:346931/1‑149 (MQ=255)                                                  aGCCCAGCGTTGTGCAGGGCATGCTGGGTCAGGCGTTTGTCCTGGCACAGGGTCAT‑GGTCACGGCACTGGTCAGGTCGCTGAGCGATTCCCGGCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGGCCGCCAGCGGCgtcgtc                                                                                                <  6:346931/149‑1 (MQ=255)                                                     ccAGCGTTGTGCAGGGCATGCTGGGTCAGGCGTTTGTCCTGGCACAGGGTCAT‑GGTCACGGCACTGGTCAGGTCGCTGAGCGATTCCCGGCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGGCCGCCAGCGGCGTCGTCCAc                                                                                             >  4:281275/1‑149 (MQ=255)                                                     ccAGCGTTGTGCAGGGCATGCTGGGTCAGGCGTTTGTCCTGGCACAGGGTCAT‑GGTCACGGCACTGGTCAGGTCGCTGAGCGATTCCCGGCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGGCCGCCAGCGGCGTCGTCCAc                                                                                             <  8:146743/149‑1 (MQ=255)                                                         cGTTGTGCAGGGCATGCTGGGTCAGGCGTTTGTCCTGGCACAGGGTCAT‑GGTCACGGCACTGGTCAGGTCGCTGAGCGATTCCCGGCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGGCCGCCAGCGGCGTCGTCCACCTg                                                                                          >  3:20055/1‑148 (MQ=255)                                                                            ggTCAGGCGTTTGTCCTGGCACAGGGTCAT‑GGTCACGGCACTGGTCAGGTCGCTGAGCGATTCCCGGCAtcgaagtgcaggtggacgacgccgctggcggcctgttcaccctgagcctgggcgggcggcgcattcgctgccgggaat                                                                        <  4:296959‑M1/147‑79 (MQ=255)                                                                              tCAGGCGTTTGTCCTGGCACAGGGTCATGGGTCACGGCACTGGTCAGGTCGCTGAGCGATTCCCGGCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGGCCGCCAGCGGCGTCGTCCACCTGCACTTCGATGCCCCGGCGCAg                                                                     >  1:20798/1‑149 (MQ=255)                                                                              tCAGGCGTTTGTCCTGGCACAGGGTCAT‑GGTCACGGCACTGGTCAGGTCGCTGAGCGATTCCCGGCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGGCCGCCAGCGGCGTCGTCCACCTGCACTTCGATGCCCCGGCGCAgg                                                                    <  2:20798/149‑1 (MQ=255)                                                                                aGGCGTTTGTCCTGGCACAGGGTCAT‑GGTCACGGCACTGGTCAGGTCGCTGAGCGATTCCCGGCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGGCCGCCAGCGGCGTCGTCCACCTGCACTTCGATGCCCCGGCGCAGGGc                                                                  <  3:281275/149‑1 (MQ=255)                                                                                aGGCGTTTGTCCTGGCACAGGGTCAT‑GGTCACGGCACTGGTCAGGTAGCTGAGCGATTCCCGGCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGGCCGCCAGCGGCGTCGTCCACCTGCACTTCGATGCCCCGGCGCAGGGc                                                                  >  2:294338/1‑149 (MQ=255)                                                                                  gCGTTTGTCCTGGCACAGGGTCAT‑GGTCACGGCACTGGTCAGGTCGCTGAGCGATTCCCGGCAtcgaagtgcaggtggacgacgccgctggcggcctgttcaccctgagcctgggcgggcggcgcattcgctgccgg                                                                            <  4:40904‑M1/137‑75 (MQ=255)                                                                                  gCGTTTGTCCTGGCACAGGGTCAT‑GGTCACGGCACTGGTCAGGTCGCTGAGCGATTCCCGGCAtcgaagtgcaggtggacgacgccgctggcggcctgttcaccctgagcctgggcgggcggcgcattcgctgccgg                                                                            >  3:40904‑M1/1‑63 (MQ=255)                                                                                  gCGTTTGTCCTGGCACAGGGTCAT‑GGTCACGGCACTGGTCAGGTCGCTGAGCGATTCCCGGCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGGCCGCCAGCGGCGTCGTCCACCTGCACTTCGATGCCCCGGCGCAGGGCCt                                                                >  2:173642/1‑149 (MQ=255)                                                                                    gTTTGTCCTGGCACAGGGTCAT‑GGTCACGGCACTGGTCAGGTCGCTGAGCGATTCCCGGCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGGCCGCCAGCGGCGTCGTCCACCTGCACTTCGATGCCCCGGCGCAGCGCCtcg                                                              >  2:129164/1‑149 (MQ=255)                                                                                           cTGGCACAGGGTCAT‑GGTCACGGCACTGGTCAGGTCGCTGAGCGATTCCCGGCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGGCCGCCAGCGGCGTCGTCCACCTGCACTTCGATGCCCCGGCGCAGGGCCTCGTcgacga                                                       <  1:122411/149‑1 (MQ=255)                                                                                              gCACAGGGTCAT‑GGTCACGGCACTGGTCAGGTCGCTGAGCGATTCCCGGCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGGCCGCCAGCGGCGTCGTCCACCTGCACTTCGATGCCCCGGCGCAGGGCCTCGTCGACgatga                                                    <  8:158520/149‑1 (MQ=255)                                                                                                  aGGGTCAT‑GGTCACGGCACTGGTCAGGTCGCTGAGCGATTCCCGGCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGGCCGCCAGCGGCGTCGTCCACCTGCACTTCGATGCCCCGGCGCAGGGCCTCGTCGACGATGAtgcg                                                >  6:319714/1‑149 (MQ=255)                                                                                                        aT‑GGTCACGGCACTGGTCAGGTCGCTGAGCGATTCCCGGCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGGCCGCCAGCGGCGTCGTCCACCTGCACTTCGATGCCCCGGCGCAGGGCCTCGTCGACGATGAtgcgtgcg                                            >  4:45761/1‑147 (MQ=255)                                                                                                        aT‑GGTCACGGCACTGGTCAGGTCGCTGAGCGATTCCCGGCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGGCCGCCAGCGGCGTCGTCCACCTGCACTTCGATGCCCCGGCGCAGGGCCTCGTCGACGATGATgcgtgcgt                                           <  5:233363/148‑1 (MQ=255)                                                                                                         t‑GGTCACGGCACTGGTCAGGTCGCTGTGCGATTCCGGGCAGCGAATGGTCCGCCCGCGCAGGCTCAGGGTGAACAGGCCGCCAGCGGCGTCGTCCACCTGCACTTCGATGCCCCGTCGCAGGGCCTCGTCGAAGATGATGAGTGCGTAg                                         <  2:138315/149‑1 (MQ=255)                                                                                                                cGGCACTGGTCAGGTCGCTGAGCGATTCCCGGCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGGCCGCCAGCGGCGTCGTCCACCTGCACTTCGATGCCCCGGCGCAGGGCCTCGTCGACGATGATGCGTGCGTAGTGGTTg                                   <  3:64574/149‑1 (MQ=255)                                                                                                                 ggCACTGGTCAGGTCGCTGAGCGATTCCCGGCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGGCCGCCAGCGGCGTCGTCCACCTGCACTTCGATGCCCCGGCGCAGGGCCTCGTCGACGATGATGCGTGCGTAGGGGTTGa                                  <  3:256266/149‑1 (MQ=255)                                                                                                                  gCACTGGTCAGGTCGCTGAGCGATTCCCGGCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGGCCGCCAGCGGCGTCGTCCACCTGCACTTCGATGCCCCGGCGCAGGGCCTCGTCGACGATGATGCGTGCGTAGGGGTTGAg                                 <  6:320850/149‑1 (MQ=255)                                                                                                                        gTCAGGTCGCTGAGCGATTCCCGGCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGGCCGCCAGCGGCGTCGTCCACCTGCACTTCGATGCCCCGGCGCAGGGCCTCGTCGACGATGATGCGTGCGTAGGGGTTGAGGTCGGc                           <  3:45761/149‑1 (MQ=255)                                                                                                                         tCAGGTCGCTGAGCGATTCCCGGCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGGCCGCCAGCGGCGTCGTCCACCTGCACTTCGATGCCCCGGCGCAGGGCCTCGTCGACGATGATGCGTGCGTAGGGGTTGAGGTCGGCt                          >  5:49738/1‑149 (MQ=255)                                                                                                                          cAGGTCGCTGAGCGATTCCCGGCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGGCCGCCAGCGGCGTCGTCCACCTGCACTTCGATGCCCCGGCGCAGGGCCTCGTCGACGATGATGCGTGCGTAGGGGTTGAGGTCGGCtt                         >  3:313065/1‑149 (MQ=255)                                                                                                                          cAGGTCGCTGAGCGATTCCCGGCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGGCCGCCAGCGGCGTCGTCCACCTGCACTTCGATGCCCCGGCGCAGGGCCTCGTCGACGATGATGCGTGCGTAGGGGTTGAGGTCGGCtt                         >  3:308170/1‑149 (MQ=255)                                                                                                                             gTCGCTGAGCGATTCCCGGCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGGCCGCCAGCGGCGTCGTCCACCTGCACTTCGATGCCCCGGCGCAGGGCCTCGTCGACGATGATGCGTGCGTAGGGGTTGAGGTCGGCTTGCg                      >  5:20470/1‑149 (MQ=255)                                                                                                                             gTCGCTGAGCGATTCCCGGCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGAGAACAGGCCGCCAGCGGCGTCGTCCACCTGCACTTCGATGCCCCGGCGCAGGGCCTCGTCGACGATGATGCGTGCGTAGGGGTTGAGGTCGGCTTGCg                      >  1:253987/1‑149 (MQ=255)                                                                                                                                gCTGAGCGATTCCCGGCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGGCCGCCAGCGGCGTCGTCCACCTGCACTTCGATGCCCCGGCGCAGGGCCTCGTCGACGATGATGCGTGCGTAGGGGTTGAGGTCGGCTTGCGGGc                   <  4:20055/149‑1 (MQ=255)                                                                                                                                 cTGAGCGATTCCCGGCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGGCCGCCAGCGGCGTCGTCCACCTGCACTTCGATGCCCCGGCGCAGGGCCTCGTCGACGATGATGCGTGCGTAGGGGTTGa                                  >  5:223389/1‑133 (MQ=255)                                                                                                                                 cTGAGCGATTCCCGGCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGGCCGCCAGCGGCGTCGTCCACCTGCACTTCGATGCCCCGGCGCAGGGCCTCGTCGACGATGATGCGTGCGTAGGGGTTGa                                  <  6:223389/133‑1 (MQ=255)                                                                                                                                  tGAGCGATTCCCGGCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGGCCGCCAGCGGCGTCGTCCACCTGCACTTCGATGCCCCGGCGCAGGGCCTCGTCGACGATGATGCGTGCGTAGGGGTTGAGGTCGGc                           <  5:236462/139‑1 (MQ=255)                                                                                                                                  tGAGCGATTCCCGGCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGGCCGCCAGCGGCGTCGTCCACCTGCACTTCGATGCCCCGGCGCAGGGCCTCGTCGACGATGATGCGTGCGTAGGGGGTGCTGTCGGCtagaacgt                   >  6:236462/1‑140 (MQ=255)                                                                                                                                    aGCGATTCCCGGCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGGCCGCCAGCGGCGTCGTCCACCTGCACTTCGATGCCCCGGCGCAGGGCCTCGTCGACGATGATGCGTGCGTAGGGGTTGAGGTCGGCTTGCGGGCCAgg               >  5:125974/1‑149 (MQ=255)                                                                                                                                        aTTCCCGGCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGGCCGCCAGCGGCGTCGTCCACCTGCACTTCGAtgccgggaatcgctcagcgacctgaccagtgccgtgaccatgaccctgtgccaggacaaacgcctgacc             <  4:296959‑M2/147‑70 (MQ=255)                                                                                                                                           cccGGCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGGCCGCCAGCGGCGTCGTCCACCTGCACTTCGATGCCCCGGCGCAGGGCCTCGTCGACGATGATGCGTGCGTAGGGGTTGAGGTCGGCTTGCGGGCCAGGCCCGAg         <  8:205261/148‑1 (MQ=255)                                                                                                                                            ccGGCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGGCCGCCAGCGGCGTCGTCCACCTGCACTTCGAtgccgggaatcgctcagcgacctgaccagtgccgtgaccatgaccctgtgccaggacaaacgc                   <  4:40904‑M2/137‑64 (MQ=255)                                                                                                                                            ccGGCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGGCCGCCAGCGGCGTCGTCCACCTGCACTTCGAtgccgggaatcgctcagcgacctgaccagtgccgtgaccatgaccctgtgccaggacaaacgc                   >  3:40904‑M2/1‑74 (MQ=255)                                                                                                                                             cGGCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGGCCGCCAGCGGCGTCGTCCACCTGCACTTCGATGCCCCGGCGCAGGGCCTCGTCGACGATGATGCGTGCGTAGGGGTTGAGGTCGGCTTGCGGGCCAGGCCCGAGGaa      >  4:74546/1‑149 (MQ=255)                                                                                                                                               gCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGGCCGCCAGCGGCGTCGTCCACCTGCACTTCGATGCCCCGGCGCAGGGCCTCGTCGACGATGATGCGTGCGTAGGGGTTGAGGTCGGCTTGCGGGCCAGGc              >  8:234883/1‑139 (MQ=255)                                                                                                                                               gCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGGCCGCCAGCGGCGTCGTCCACCTGCACTTCGATGCCCCGGCGCAGGGCCTCGTCGACGATGATGCGTGCGTAGGGGTTGAGGTCGGCTTGCGGGCCAGGc              <  7:234883/139‑1 (MQ=255)                                                                                                                                                 aGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGGCCGCCAGCGGCGTCGTCCACCTGCACTTCGATGCCCCGGCGCAGGGCCTCGTCGACGATGATGCGTGCGTAGGGGTTGAGGTCGGCTTGCGGGCCAGGCCCGAGGAACAgc  <  1:173642/149‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                     CGCCAGGTTGTCATCGGCATTGCCCGCCAGCTGTTGCGCGGGCACCTGCAGCCCAGCGTTGTGCAGGGCATGCTGGGTCAGGCGTTTGTCCTGGCACAGGGTCAT‑GGTCACGGCACTGGTCAGGTCGCTGAGCGATTCCCGGCAGCGAATGCGCCGCCCGCCCAGGCTCAGGGTGAACAGGCCGCCAGCGGCGTCGTCCACCTGCACTTCGATGCCCCGGCGCAGGGCCTCGTCGACGATGATGCGTGCGTAGGGGTTGAGGTCGGCTTGCGGGCCAGGCCCGAGGAACAGC  >  NC_002947/1948578‑1948869

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.