New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4898076 =	49 (0.910)	4 (0.080)	4/254	NT	7.4%	coding (468/957 nt)	PP_4306	hypothetical protein
	?	NC_002947	4898122 =	53 (1.020)					coding (422/957 nt)	PP_4306	hypothetical protein

CCGTGATGCATCGTGGCCATTGAGGCGATGGTTGTCCCGGCCCCGCGACAGCGCCGACTTGGCCATGTCCAGGTTCACCACCTGCTCAGCGCCACCGGCAATCGCTGCCACAGAAAAGCCGCAGGTATAGGCGAACAGGTTCAGCACGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAGCGCATGTCGAGGAACAGGCCATTGTTTTGCCGCACGCCCAAGTCCAGCAGGTAGGTCAGGCCGTCCTCGATCACTTCGCGTTGCTGGCAGGGCTCACCCAGCAG  >  NC_002947/4897929‑4898222                                                                                                                                                    |                                                                                                                                                   ccGTGATGCATCGTGGCCATTGAGGCGATGGTTGTCCCGGCCCCGCGACAGCGCCGACTTGGCCATGTCCAGGTTCACCACCTGCTCAGCGCCACCGGCAATCGCTGCCACAGAAAAGCCGCAGGTATAGGCGAACAGGTTCAGCAcgc                                                                                                                                                   >  6:240464/1‑149 (MQ=255)      aTGCATCGTGGCCATTGAGGCGATGGTTGTCCCGGCCCCGCGACAGCGCCGACTTGGCCATGTCCAGGTTCACCACCTGCTCAGCGCCACCGGCAATCGCTGCCACAGAAAAGCCGCAGGTATAGGCGAACAGGTTCAGCACGCGCTTg                                                                                                                                              >  8:106939/1‑149 (MQ=255)              tGGCCATTGAGGCGATGGTTGTCCCGGCCCCGCGACAGCGCCGACTTGGCCATGTCCAGGTGCACCACCTGCTCAGCGCCACCGGCAATCGCTGCCACAGAAAAGCCGCAGGTATAGGCGAACAGGTTCAGCACGCGCTTGCCcgccgc                                                                                                                                      <  5:254536/149‑1 (MQ=255)                           gATGGTTGTCCCGGCCCCGCGACAGCGCCGACTTGGCCATGTCCAGGTTCACCACCTGCTCAGCGCCACCGGCAATCGCTGCCACAGAAAAGCCGCAGGTATAGGCGAACAGGTTCAGCACGCGCTTGCCCGCCGCCTGCTCGCGCAcc                                                                                                                         >  5:330394/1‑149 (MQ=255)                                ttGTCCCGGCCCCGCGACAGCGCCGACTTGGCCATGTCCAGGTTCACCACCTGCTCAGCGCCACCGGCAATCGCTGCCACAGAAAAGCCGCAGGTATAGGCGAACAGGTTCAGCACGCGCGTg                                                                                                                                              >  8:250764/1‑123 (MQ=255)                                   tCCCGGCCCCTCGACTGCGCCGACTTGTCGATGTCCAGGTTCACCACCTGCTCTGAGCCTCTGGTAATGGCTGCCACAGAAAAGCCTCAGGTATATGCGAACAGGTTCAGCAAGAGCTTGCCCGCGGCCTTCTGGCGCACCCTgcgggg                                                                                                                 <  4:110954/149‑3 (MQ=255)                                     ccGGCCCCGCGACAGCGCCGACTTGGCCATGTCCAGGTTCACCACCTGCTCAGCGCCACCGGCAATCGCTGCCACAGAAAAGCCGCAGGTATAGGCGAACAGGTTCAGCACGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCggcggc                                                                                                               <  7:132941/149‑1 (MQ=255)                                     ccGGCCCCGCGACAGCGCCGACTTGGCCATGTCCAGGTTCACCACCTGCTCAGCGCCACCGGCAATCGCTGCCACAGAAAAGCCGCAGGTATAGGCGAACAGGTTCAGCACGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCggcggc                                                                                                               >  6:137337/1‑149 (MQ=255)                                     ccGGCCCCGCGACAGCGCCGACTTGGCCATGTCCAGGTTCACCACCTGCTCAGCGCCACCGGCAATCGCTGCCACAGAAAAGCCGCAGGTATAGGCGAACAGGTTCAGCACGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCggcggc                                                                                                               >  3:267968/1‑149 (MQ=255)                                      cGGCCCCGCGACAGCGCCGACTTGGCCATGTCCAGGTTCACCACCTGCTCAGCGCCACCGGCAATCGCTGCCACAGAAAAGCCGCAGGTATAGGCGAACAGGTTCAGCACGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCggcggc                                                                                                               >  6:253193/1‑148 (MQ=255)                                         cagtggctgctgggtgagccctgccagcaacgcgaagtgatcgaggacggcctgacctacctgctggacttgggcgtgcggcaaaacaatggcctgttcctcgacatGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCa                                                                                                             <  3:277211‑M1/40‑1 (MQ=255)                                           ccGCGACAGCGCCGACTTGGCCATGTCCAGGTTCACCACCTGCTCAGCGCCACCGGCAATCGCTGCCACAGAAAAGCCGCAGGTATAGGCGAACAGGTTCAGCACGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAgc                                                                                                         >  7:125899/1‑149 (MQ=255)                                                tgctgggtgagccctgccagcaacgcgaagtgatcgaggacggcctgacctacctgctggacttgggcgtgcggcaaaacaatggcctgttcctcgacatGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAgc                                                                                                         <  3:283172‑M1/44‑1 (MQ=255)                                                tgctgggtgagccctgccagcaacgcgaagtgatcgaggacggcctgacctacctgctggacttgggcgtgcggcaaaacaatggcctgttcctcgacatGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAgc                                                                                                         >  4:283172‑M1/101‑144 (MQ=255)                                                  ctgggtgagccctgccagcaacgcgaagtgatcgaggacggcctgacctacctgctggacttgggcgtgcggcaaaacaatggcctgttcctcgacatGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAGCGCATg                                                                                                    >  4:277211‑M1/99‑147 (MQ=255)                                                    cgcCGACTTGGCCATGTCCAGGTTCACCACCTGCTCAGCGCCACCGGCAATCGCTGCCACAGAAAAGCCGCAGGTATAGGCGAACAGGTTCAGCACGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAGCGCATGTc                                                                                                  >  6:6808/1‑147 (MQ=255)                                                    cgcCGACTTGGCCATGTCCAGGTTCACCACCTGCTCAGCGCCACCGGCAATCGCTGCCACAGAAAAGCCGCAGGTATAGGCGAACAGGTTCAGCACGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAGCGCATGTCGa                                                                                                <  6:124787/149‑1 (MQ=255)                                                     gcCGACTTGGCCATGTCCAGGTTCACCACCTGCTCAGCGCCACCGGCAATCGCTGCCACAGAAAAGCCGCAGGTATAGGCGAACAGGTTCAGCACGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAGCGCATGTCGAg                                                                                               <  5:119115/149‑1 (MQ=255)                                                     gcCGACTTGGCCATGTCCAGGTTCACCACCTGCTCAGCGCCACCGGCAATCGCTGCCACAGAAAAGCCGCAGGTATAGGCGAACAGGTTCAGCACGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAGCGCATGTCGAg                                                                                               <  5:240464/149‑1 (MQ=255)                                                           ttGGCCATGTCCAGGTTCACCACCTGCTCAGCGCCACCGGCAATCGCTGCCACAGAAAAGCCGCAGGTATAGGCGAACAGGTTCAGCACGCGCtt                                                                                                                                               <  7:195400/95‑1 (MQ=255)                                                           ttGGCCATGTCCAGGTTCACCACCTGCTCAGCGCCACCGGCAATCGCTGCCACAGAAAAGCCGCAGGTATAGGCGAACAGGTTCAGCACGCGCtt                                                                                                                                               >  8:195400/1‑95 (MQ=255)                                                              gCCATGTCCAGGTTCACCACCTGCTCAGCGCCACCGGCAATCGCTGCCACAGAAAAGCCGCAGGTATAGGCGAACAGGTTCAGCACGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAGCGCATGTCGAGGAACAGGc                                                                                       <  5:304312/148‑1 (MQ=255)                                                               ccATGTCCAGGTTCACCACCTGCTCAGCGCCACCGGCAATCGCTGCCACAGAAAAGCCGCAGGTATAGGCGAACAGGTTCAGCACGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAGCGCATGTCGAGGAACAGGCCa                                                                                     >  5:315324/1‑149 (MQ=255)                                                                    tCCAGGTTCACCACCTGCTCAGCGCCACCGGCAATCGCTGCCACAGAAAAGCCGCAGGTATAGGCGAACAGGTTCAGCACGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAGCGCATGTCGAGGAACAGGCCATTGtt                                                                                >  8:88830/1‑149 (MQ=255)                                                                       aGGTTCACCACCTGCTCAGCGCCACCGGCAATCGCTGCCACAGAAAAGCCGCAGGTATAGGCGAACAGGTTCAGCACGCGCTTGCCCGCCGCCTGCTCGCGCTCCCAGCGGCGGCCATAGCGCATGTCGAGGAACAGGCCATTGTTTTg                                                                             <  5:6808/149‑1 (MQ=255)                                                                         gTTCACCACCTGCTCAGCGCCACCGGCAATCGCTGCCACAGAAAAGCCGCAGGTATAGGCGAACAGGTTCAGCACGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAGCGCATGTCGAGGAACAGGCCATTGTTTTGcc                                                                           >  4:266724/1‑149 (MQ=255)                                                                              ccaccTGCTAAGCGCCACCGGCAATCGCTGCCACAGAAAAGCCGCAGGTATAGGTGAACAGGTTCAGCACGCTCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAGCGCATGTCGAGGAACAGGCCATTGTTTTGCCGCACg                                                                      >  8:299272/1‑149 (MQ=255)                                                                               caccTGCTCAGCGCCACCGGCAATCGCTGCCACAGAAAAGCCGCAGGTATAGGCGAACAGGTTCAGCACGCGCTTGCccgccg                                                                                                                                       >  1:76887/1‑83 (MQ=255)                                                                               caccTGCTCAGCGCCACCGGCAATCGCTGCCACAGAAAAGCCGCAGGTATAGGCGAACAGGTTCAGCACGCGCTTGCccgccg                                                                                                                                       <  2:76887/83‑1 (MQ=255)                                                                                         gcgcCACCGGCAATCGCTGCCACAGAAAAGCCGCAGGTATAGGCGAACAGGTTCAGCACGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAGCGCATGTCGAGGAACAGGCCATTGTTTTGCCGCACGCCCAAGTCcag                                                           >  5:40366/1‑149 (MQ=255)                                                                                             cACCGGCAATCGCTGCCACAGAAAAGCCGCAGGTATAGGCGAACAGGTTCAGCACGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAGCGCATGTCGAGGAACAGGCCATTGTTTTGCCGCACGCCCAAGTCCAGCagg                                                       >  8:86810/1‑149 (MQ=255)                                                                                              aCCGGCAATCGCTGCCACAGAAAAGCCGCAGGTATAGGCGAACAGGTTCAGCACGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAGCGCATGTCGAGGAACAGGCCATTGTTTTGCCGCACGCCCAAGTCCAGCaggt                                                      <  3:254913/149‑1 (MQ=255)                                                                                              aCCGGCAATCGCTGCCACAGAAAAGCCGCAGGTATAGGCGAACAGGTTCAGCACGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAGCGCATGTCGAGGAACAGGCCATTGTTTTGCCGCACGCCCAAGTCCAGCagg                                                       >  1:68176/1‑148 (MQ=255)                                                                                                cGGCAATCGCTGCCACAGAAAAGCCGCAGGTATAGGCGAACAGGTTCAGCACGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAGCGCATGTCGAGGAACAGGCCATTGTTTTGCCGCACGCCCAAGTCCAGCaggtag                                                    <  4:267968/149‑1 (MQ=255)                                                                                                  gCAATCGCTGCCACAGAAAAGCCGCAGGTATAGGCGAACAGGTTCAGCACGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAGCGCATGTCGAGGAACAGGCCATTGTTTTGCCGCACGCCCAAGTCCAGCaggtaggt                                                  <  7:88830/149‑1 (MQ=255)                                                                                                  gCAATCGCTGCCACAGAAAAGCCGCAGGTATAGGCGAACAGGTTCAGCACGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAGCGCATGTCGAGGAACAGGCCATTGTTTTGCCGCACGCCCAAGTCCAGCaggtaggt                                                  <  2:333174/149‑1 (MQ=255)                                                                                                   cAATCGCTGCCACAGAAAAGCCGCAGGTATAGGCGAACAGGTTCAGCACGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAGCGCATGTCGAGGAACAGGCCATTGTTTTGCCGCACGCCCAAGTCCAGCAGGTAGGTc                                                 <  5:137337/149‑1 (MQ=255)                                                                                                      tCGCTGCCACAGAAAAGCCGCAGGTATAGGCGAACAGGTTCAGCACGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAGCGCATGTCGAGGAACAGGCCATTGTTTTGCCGCACGCCCAAGTCCAGCAGGTAGGTCAgg                                              <  8:183710/149‑1 (MQ=255)                                                                                                        gCTGCCACAGAAAAGCCGCAGGTATAGGCGAACAGGTTCAGCACGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAGCGCATGTCGAGGAACAGGCCATTGTTTTGCCGCACGCCCAAGTCCAGCAGGTAGGTCAGGc                                             <  6:315324/148‑1 (MQ=255)                                                                                                          tGCCACAGAAAAGCCGCAGGTATAGGCGAACAGGTTCAGCACGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAGCGCATGTCGAGGAACAGGCCATTGTTTTGCCGCACGCCCAAGTCCAGCAGGTAGGTCAg                                               >  3:33322/1‑144 (MQ=255)                                                                                                          tGCCACAGAAAAGCCGCAGGTATAGGCGAACAGGTTCAGCACGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAGCGCATGTCGAGGAACAGGCCATTGTTTTGCCGCACGCCCAAGTCCAGCAGGTAGGTCAg                                               <  4:33322/144‑1 (MQ=255)                                                                                                             cacgGAAAAGCCGCAGGTATAGGCGAACAGGTTCAGCACGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAGCGCATGTCGAGGAACAGGCCATTGTTTTGCCGCACGCCCAAGTCCAGCAGGTAGGTCAGGCCGTCCt                                       >  3:225918/1‑149 (MQ=255)                                                                                                               caGAAAAGCCGCAGGTATAGGCGAACAGGTTCAGCACGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAGCGCATGTCGAGGAACAGGCCATTGTTTTGCCGCACGCCCAAGTCCAGCaggta                                                     >  7:155094/1‑133 (MQ=255)                                                                                                               caGAAAAGCCGCAGGTATAGGCGAACAGGTTCAGCACGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAGCGCATGTCGAGGAACAGGCCATTGTTTTGCCGCACGCCCAAGTCCAGCaggta                                                     <  8:155094/133‑1 (MQ=255)                                                                                                                 gAAAAGCCGCAGGTATAGGCGAACAGGTTCAGCACGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAGCGCATGTCGAGGAACAGGCCATTGTTTTGCCGCACGCCCAAGTCCAGCAGGTAGGTCAGGCCGTCCTCGAt                                   >  4:65486/1‑149 (MQ=255)                                                                                                                   aaaGCCGCAGGTATAGGCGAACAGGTTCAGCACGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAGCGCATGTCGAGGAACAGGCCATTGTTTTGCCGCACGCCCAAGTCCAGCAGGTAGGTCAGGCCGTCCTCGATCa                                 <  6:330394/149‑1 (MQ=255)                                                                                                                        cGCAGGTTTAGGCGAACATGTTCAGCACGCGGTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAGCGCATGTCGAGGAACAGGCCATTGTTTTGCCGCACGCCCAAGTCCAGCAGGTAGGTCAgg                                              <  7:210340/131‑1 (MQ=255)                                                                                                                         gCAGGTATAGGCGAACAGGTTCAGCACGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAGCGCATGTCGAGGAACAGGCCATTGTTTTGCCGCACGCCCAAGTCCAGCAGGTAGGTCAGGCCGTc                                         >  2:121395/1‑135 (MQ=255)                                                                                                                             gTATAGGCGAACAGGTTCAGCACGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAGCGCATGTCGAGGAACAGGCCATTGTTTTGCCGCACGCCCAAGTCCAGCAGGTAGGTCAGGCCGTCCTCGATCACTTCGCGTTg                       <  5:253193/149‑1 (MQ=255)                                                                                                                              tataGGCGAACAGGTTCAGCACGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAGCGCATGTCGAGGAACAGGCCATTGTTTTGCCGCACGCCCAAGTCCAGCAGGTAGGTCAGGCCGTCCTCGATCACTTCGCGTTGc                      >  1:285958/1‑149 (MQ=255)                                                                                                                                  ggCGAACAGGTTCAGCACGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAGCGCATGTCGAGGAACAGGCCATTGTTTTGCCGCACGCCCAAGTCCAGCAGGTAGGTCAGGCCGTCCTCGATCACTTCGCGTTGCTGGc                  <  4:225918/149‑1 (MQ=255)                                                                                                                                   gCGAACAGGTTCAGCACGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAGCGCATGTCGAGGAACAGGCCATTGTTTTGCCGCACGCCCAAGTCCAGCAGGTAGGTCAGGCCGTCCTCGATCACTTCGCGTTGCTGGCa                 <  6:40366/149‑1 (MQ=255)                                                                                                                                    cGAACAGGTTCAGCACGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAGCGCATGTCGAGGAACAGGCCATTGTTTTGCCGCACGCCCAAGTCCAGCAGGTAGGTCAGGCCGTCCTCGATCACTTCGCGTTGCTGGCAg                <  7:86810/149‑1 (MQ=255)                                                                                                                                           gTTCAGCACGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAGCGCATGTCGAGGAACAGGCCATTGTTTTGCCGCACGCCCAAGTCCAGCAGGTAGGTCAGGCCGTCCTCGATCACTTCGCGTTGCTGGCAGGGCTCAc         <  8:125899/149‑1 (MQ=255)                                                                                                                                               aGCACGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAGCGCATGTCGAGGAACAGGCCATTGTTTTGCCGCACGCCCAAGTCCAGCAGGTAGGTCAGGCCGTCCTCGATCACTTCGCGTTGCTGGCAGGGCTCACCca      <  7:106939/148‑1 (MQ=255)                                                                                                                                                 cACGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAGCGCATGTCGAGGAACAGGCCATTGTTTTGCCGCACGCCCAAGTCCAGCAGGTAGGTCAGGCCGTCCTCGATCACTTCGCGt                         >  1:338724/1‑127 (MQ=255)                                                                                                                                                  aCGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAGCGCATGTCGAGGAACAGGCCATTGTTTTGCCGCACGCCCAAGTCCAGCAGGTAGGTCAGGCCGTCCTCGATCACTTCGCGTTGCTGGCAGGGCTCACCcagcag  >  8:66970/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                   CCGTGATGCATCGTGGCCATTGAGGCGATGGTTGTCCCGGCCCCGCGACAGCGCCGACTTGGCCATGTCCAGGTTCACCACCTGCTCAGCGCCACCGGCAATCGCTGCCACAGAAAAGCCGCAGGTATAGGCGAACAGGTTCAGCACGCGCTTGCCCGCCGCCTGCTCGCGCACCCAGCGGCGGCCATAGCGCATGTCGAGGAACAGGCCATTGTTTTGCCGCACGCCCAAGTCCAGCAGGTAGGTCAGGCCGTCCTCGATCACTTCGCGTTGCTGGCAGGGCTCACCCAGCAG  >  NC_002947/4897929‑4898222

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.