New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 222180 =79 (1.470)5 (0.100) 4/242 NT 7.1% coding (35/1020 nt) PP_0170 ABC transporter substrate‑binding protein
?NC_002947 222241 = 58 (1.180)coding (96/1020 nt) PP_0170 ABC transporter substrate‑binding protein

TACCGCACCACCATCCAGGGCGATGCCCCGTTCTGACGACTGAGGAAACCATCATGCGCAAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACCTGCTGCTGAACGTGGTGCGTGACCAGCACCTGATTGAGAAACACGGCAAGGAGCAGGGCATCGACATCGAAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTC  >  NC_002947/222093‑222388
                                                                                                                                                    |                                                                                                                                                     
tACCGCACCACCATCCAGGGCGATGCCCCGTTCTGACGACTGAGGAAACCATCATGCGCAAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGaa                                                                                                                                                       <  3:221990/149‑1 (MQ=255)
  ccGCACCACCATCCAGGGCGATGCCCCGTTCTGACGACTGAGGAAACCATCATGCGCAAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAg                                                                                                                                                      <  2:288843/148‑1 (MQ=255)
   cGCACCACCATCCAGGGCGATGCCCCGTTCTGACGACTGAGGAAACCATCATGCGCAAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGc                                                                                                                                                    <  4:260053/149‑1 (MQ=255)
     caccacCATCCAGGGCGATGCCCCGTTCTGACGACTGAGGAAACCATCATGCGCAAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGc                                                                                                                                                    >  5:154143/1‑147 (MQ=255)
        caccaTCCAGGGCGATGCCCCGTTCTGACGACTGAGGAAACCATCATGCGCAAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGc                                                                                                                                                    >  1:272547/1‑144 (MQ=255)
        caccaTCCAGGGCGATGCCCCGTTCTGACGACTGAGGAAACCATCATGCGCAAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGc                                                                                                                                                    >  2:101117/1‑144 (MQ=255)
         accaTCCAGGGCGATGCCCCGTTCTGACGACTGAGGAAACCATCATGCGCAAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATc                                                                                                                                            >  5:100222/1‑149 (MQ=255)
         accaTCCAGGGCGATGCCCCGTTCTGACGACTGAGGAAACCATCATGCGCAAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATc                                                                                                                                            >  6:131436/1‑149 (MQ=255)
          ccaTCCAGGGCGATGCCCCGTTCTGACGACTGAGGAAACCATCATGCGCCAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATcc                                                                                                                                           <  2:93193/149‑1 (MQ=255)
           caTCCAGGGCGATGCCCCGTTCTGACGACTGAGGAAACCATCATGCGCAAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCg                                                                                                                                          >  7:31120/1‑149 (MQ=255)
             tCCAGGGCGATGCCCCGTTCTGACGACTGAGGAAACCATCATGCGCAAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTa                                                                                                                                        >  4:145226/1‑149 (MQ=255)
             tCCAGGGCGATGCCCCGTTCTGACGACTGAGGAAACCATCATGCGCAAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTa                                                                                                                                        <  4:43834/149‑1 (MQ=255)
                aGGGCGATGCCCCGTTCTGACGACTGAGGAAACCATCATGCGCAAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCAGGGCGCAAGCCTGGTCGTAGGCAGCCTAGCCGCCCCCGCCGTCGCCCAGGCCGAAGGCA‑‑AGAACCCTATTg                                                                                                                                     >  5:180769/1‑149 (MQ=255)
                 gggCGATGCCCCGTTCTGACGACTGAGGAAACCATCATGCGCAAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGc                                                                                                                                    <  1:78990/149‑1 (MQ=255)
                  ggCGATGCCCCGTTCTGACGACTGAGGAAACCATCATGCGCAAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGcc                                                                                                                                   <  2:43271/149‑1 (MQ=255)
                         ccccGTTCTGACGACTGAGGAAACCATCATGCGCAAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAAt                                                                                                                            >  6:69514/1‑149 (MQ=255)
                          cccGTTCTGACGACTGAGGAAACCATCATGCGCAAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTGGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAAtt                                                                                                                           >  4:168946/1‑149 (MQ=255)
                          cccGTTCTGACGACTGAGGAAACCATCATGCGCAAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATcc                                                                                                                                           >  3:235753/1‑133 (MQ=255)
                          cccGTTCTGACGACTGAGGAAACCATCATGCGCAAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATcc                                                                                                                                           <  4:235753/133‑1 (MQ=255)
                              ttCTTACGACTGAGGAAACCATCATGCGCAAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGc                                                                                                                       <  5:69514/149‑1 (MQ=255)
                              ttCTGACGACTGAGGAAACCATCATGCGCAAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAATTGTTCGGc                                                                                                                       <  1:11966/149‑1 (MQ=255)
                                  gacgacTGAGGAAACCATCATGCGCAAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTg                                                                                                                                     >  8:100915/1‑131 (MQ=255)
                                  gacgacTGAGGAAACCATCATGCGCAAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTg                                                                                                                                     <  7:100915/131‑1 (MQ=255)
                                   acgacTGAGGAAACCATCATGCGCAAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAATTGTTCGGCaata                                                                                                                   <  4:241609/148‑4 (MQ=255)
                                   acgacTGAGGAAACCATCATGCGCAAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCAt                                                                                                                     <  3:145226/146‑1 (MQ=255)
                                   acgacTGAGGAAACCATCATGCGCAAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATc                                                                                                                    <  5:231116/147‑1 (MQ=255)
                                   acgacTGAGGAAACCATCATGCGCAAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGt                                                                                                                  >  4:147790/1‑149 (MQ=255)
                                   acgacTGAGGAAACCATCATGCGCAAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGt                                                                                                                  >  3:214196/1‑149 (MQ=255)
                                     gacTGAGGAAACCATCATGCGCAAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAATTGTTCGGCaatacgg                                                                                                                <  6:100222/149‑7 (MQ=255)
                                     gacTGAGGAAACCATCATGCGCAAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTc                                                                                                                 >  3:45929/1‑148 (MQ=255)
                                     gacTGAGGAAACCATCATGCGCAAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTc                                                                                                                 >  4:201698/1‑148 (MQ=255)
                                     gacTGAGGAAACCATCATGCGCAAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTc                                                                                                                 >  1:16474/1‑148 (MQ=255)
                                       cTGAGGAAACCATCATGCGCAAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑CGATCCGTATTGCCGAACAATTCGGCATCGTCTAc                                                                                                              <  5:133989/149‑1 (MQ=255)
                                       cTGAGGAAACCATCATGCGCAAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTAc                                                                                                              <  5:174475/149‑1 (MQ=255)
                                        tGAGGAAACCATCATGCGCAAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTAcc                                                                                                             >  6:32962/1‑149 (MQ=255)
                                          aGGAAACCATCATGCGCAAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTAcc                                                                                                             <  6:46683/147‑1 (MQ=255)
                                           ggAAACCATCATGCGCAAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACctgc                                                                                                          >  5:10637/1‑149 (MQ=255)
                                              aaCCATCATGCGCAAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACctgctgc                                                                                                       <  1:306945/149‑1 (MQ=255)
                                                ccATCATGCGCAAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACctgctgctg                                                                                                     <  2:16474/149‑1 (MQ=255)
                                                      tGCGCAAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCAACAAAAAGGTATTGCCGAACAATTCGGCATCGTATACCTGCTGCTGAACg                                                                                                 >  1:114817/1‑149 (MQ=255)
                                                         gcAAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACCTGCTGCTGAACgtggtg                                                                                            >  8:176284/1‑149 (MQ=255)
                                                                  tCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACCTGCTGCTGAACGTGGTGCGTGACCAg                                                                                   <  4:224775/149‑1 (MQ=255)
                                                                     gccgccTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACCTGCTGCTGAACGTGGTGCGTGACCAGCAc                                                                                >  1:7785/1‑149 (MQ=255)
                                                                     gccgccTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACCTGCTGCTGAACGTGGTGCGTGACCAGCAc                                                                                >  4:111219/1‑149 (MQ=255)
                                                                      ccgccTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACCTGCTGCTGAACGTGGTGCGTGACCAGCAcc                                                                               >  4:43407/1‑149 (MQ=255)
                                                                       cgccTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTGGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACCTGCTGCTGAACGTGGTGCGTGACCAGCACCt                                                                              <  3:168946/149‑1 (MQ=255)
                                                                         ccTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACCTGCTGCTGAACGTGGTGCGTGACCAGCACCTGa                                                                            <  5:131436/149‑1 (MQ=255)
                                                                         ccTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACCTGCTGCTGAACGTGGTGCGTGACCAGCACCTGa                                                                            <  8:31120/149‑1 (MQ=255)
                                                                           tGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACCTGCTGCTGAACGTGGTGCGTGACCAGCACCTGAtt                                                                          >  1:116685/1‑149 (MQ=255)
                                                                              cggcAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACCTGCTGCTGAACGTGGTGCGTGACCAGCACCTGATTgag                                                                       <  7:216245/149‑1 (MQ=255)
                                                                              cggcAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACCTGCTGCTGAACGTGGTGCGTGACCAGCACCTGATTgag                                                                       <  3:147790/149‑1 (MQ=255)
                                                                                       TCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAAGAATTCGGCATCGTCTACCTGCTGCTGAACGTGGTGAGTGACCAGCACCTGATTGAGACACACGGc                                                              <  4:102109‑M1/149‑1 (MQ=255)
                                                                                          gcctgggccacggcgggggcggctaggctgccgacgaccaggcttgcgcccaggccgaAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACCTGCTGCTGAACGTGGTGCGTGACCAGCACCTGATTGAGAAACACGGCAAg                                                           >  5:29168‑M2/59‑149 (MQ=255)
                                                                                          GCCTGGGCGGAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACCTGCTGCTGAACGTGGTGCGTGACCAGCACCTGATTGAGAAACACGGCAAg                                                           >  6:180769‑M1/1‑149 (MQ=255)
                                                                                          GCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACCTGCTGCTGAACGTGGTGCGTGACCAGCACCTGATTGAGAAACACGGCAAg                                                           <  5:241163‑M1/149‑1 (MQ=255)
                                                                                           cctgggccacggcgggggcggctaggctgccgacgaccaggcttgcgcccaggccgaAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACCTGCTGCTGaa                                                                                                   <  5:218817‑M2/51‑1 (MQ=255)
                                                                                           cctgggccacggcgggggcggctaggctgccgacgaccaggcttgcgcccaggccgaAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACCTGCTGCTGaa                                                                                                   >  6:218817‑M2/58‑108 (MQ=255)
                                                                                           cctgggccacggcgggggcggctaggctgccgacgaccaggcttgcgcccaggccgaAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACCTGCTGCTGAACGTGGTGCGTGACCAGCACCTGATTGAGAAACACGGCAAgg                                                          >  8:174101‑M2/58‑149 (MQ=255)
                                                                                               GGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACCTGCTGCTGAACGTGGTGCGTGACCAGCACCTGATTGAGAAACACGGCAAGGAg                                                        >  4:214196‑M1/1‑147 (MQ=255)
                                                                                                 CGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACCTGCTGCTGAACGTGGTGCGTGACCAGCACCTGATTGAGAAACACGGCAAGGAGCAgg                                                    >  2:116685‑M1/1‑149 (MQ=255)
                                                                                                  cacggcgggggcggctaggctgccgacgaccaggcttgcgcccaggccgaAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACCTGCTGCTGAACGTGGTGCGTGACCAGCACCTGATTGAGAAACACGGCAAGGAGCAggg                                                   >  6:67779‑M2/51‑149 (MQ=255)
                                                                                                          ggTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGCCATCGTCTACCAGCTGCTGAACGTCGTGCGTGCCCAGCACCTGATAGAGAAACACGGCAAGGAGCACGGcatcgaca                                           >  4:107167/1‑149 (MQ=255)
                                                                                                              gtcgGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACCTGCTGCTGAACGTGGTGCGTGACCAGCACCTGATTGAGAAACACGGCAAGGAGCAgg                                                    >  2:43313/1‑136 (MQ=255)
                                                                                                              gtcgGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACCTGCTGCTGAACGTGGTGCGTGACCAGCACCTGATTGAGAAACACGGCAAGGAGCAgg                                                    <  1:43313/136‑1 (MQ=255)
                                                                                                              gtcgGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACCTGCTGCTGAACGTGGTGCGTGACCAGCACCTGATTGAGAAACACGGCAAGGAGCAGGGcatcgacatcg                                        >  2:263452/1‑148 (MQ=255)
                                                                                                               tcgGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACCTGCTGCTGAACGTGGTGCGTGACCAGCACCTGATTGAGAAACACGGCAAGGAGCAGGGCATCGACATCGaa                                      <  3:201698/149‑1 (MQ=255)
                                                                                                               tcgGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACCTGCTGCTGAACGTGGTGCGTGACCAGCACCTGATTGAGAAACACGGCAAGGAGCAGGGCATCGACATCGaa                                      <  1:101117/149‑1 (MQ=255)
                                                                                                                 ggCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAAGTCGGCATCGTCTCCCTGATGCTGAACGTGGTGCGTGACCAGCACCTGATTGAGAAACAAGGCAAGGAGCAGGGAATCGACATCGaatg                                    >  3:194081/1‑147 (MQ=255)
                                                                                                                     gCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACCTGCTGCTGAACGTGGTGCGTGACCAGCACCTGATTGAGAAACACGGCAAGGAGCAGGGCATCGACATCGAAGTCGAt                                <  2:272547/149‑1 (MQ=255)
                                                                                                                      ccTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACCTGCTGCTGAACGTGGTGCGTGACCAGCACCTGATTGAGAAACACGGCAAGGAGCAGGGCATCGACATCGAAGTCGAtt                               <  6:241163/149‑1 (MQ=255)
                                                                                                                      ccTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACCTGCTGCTGAACGTGGTGCGTGACCAGCACCTGATTGAGAAACACGGCAAGGAGCAGGGCATCGACATCGAAGTCGAtt                               <  3:43407/149‑1 (MQ=255)
                                                                                                                      ccTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACCTGCTGCTGAACGTGGTGCGTGACCAGCACCTGATTGAGAAACACGGCAAGGAGCAGGGCATCGACATCGAAGTCGAtt                               <  2:7785/149‑1 (MQ=255)
                                                                                                                       cTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACCTGCTGCTGAACGTGGTGCGTGACCAGCACCTGATTGAGAAACACGGCAAGGAGCAGGGCATCGACATCGAAGTCGATTg                              <  8:273830/149‑1 (MQ=255)
                                                                                                                       cTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACCTGCTGCTGAACGTGGTGCGTGACCAGCACCTGATTGAGAAACACGGCAAGGAGCAGGGCATCGACATCGAAGTCGATTg                              <  3:253385/149‑1 (MQ=255)
                                                                                                                                     cgTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACCTGCTGCTGAACGTGGTGCGTGAcc                                                                                     >  8:89843/1‑80 (MQ=255)
                                                                                                                                     cgTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACCTGCTGCTGAACGTGGTGCGTGAcc                                                                                     <  7:89843/80‑1 (MQ=255)
                                                                                                                                       tGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACCTGCTGCTGAACGTGGTGCGTGACCAGCACCTGATTGAGAAACACGGCAAGGAGCAGGGCATCGACATCGAAGTCGATTGGGCGCAGCTGTCGGGt              <  7:176284/149‑1 (MQ=255)
                                                                                                                                              ggccgaAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACCTGCTGCTGAACGTGGTGCGTGACCAGCACCTGATTGAGAAACACGGCAAGGAGCAGGGCATCGACATCGAAGTCGATTGGGCGCAGCTGTCGGGTGGCTCgg       <  2:114817‑M2/143‑1 (MQ=255)
                                                                                                                                                ccgaAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACCTGCTGCTGAACGTGGTGCGTGACCAGCACCTGATTGAGAAACACGGCAAGGAGCAGGGCATCGACATCGAAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGcc     >  5:346110‑M2/5‑149 (MQ=255)
                                                                                                                                                ccgaAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACCTGCTGCTGAACGTGGTGCGTGACCAGCACCTGATTGAGAAACACGGCAAGGAGCAGGGCATCGACATCGAAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGcc     <  4:45929‑M2/145‑1 (MQ=255)
                                                                                                                                                 cgaAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACCTGCTGCTGAACGTGGTGCGTGACCAGCACCTGATTGAGAAACACGGCAAGGAGCAGGGCATCGACATCGAAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCg    >  8:37979‑M2/4‑149 (MQ=255)
                                                                                                                                                    aGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACCTGCTGCTGAACGTGGTGCGTGACCAGCACCTGATTGAGAAACACGGCAAGGAGCAGGGCATCGACATCGAAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTc  >  6:87959/1‑148 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
TACCGCACCACCATCCAGGGCGATGCCCCGTTCTGACGACTGAGGAAACCATCATGCGCAAATCCATCAGCCGCCTGGCGGCAAGCATCGGCCTGGGCGCAAGCCTGGTCGTCGGCAGCCTAGCCGCCCCCGCCGTGGCCCAGGCCGAAGGCA‑‑AGATCCGTATTGCCGAACAATTCGGCATCGTCTACCTGCTGCTGAACGTGGTGCGTGACCAGCACCTGATTGAGAAACACGGCAAGGAGCAGGGCATCGACATCGAAGTCGATTGGGCGCAGCTGTCGGGTGGCTCGGCCGTC  >  NC_002947/222093‑222388

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.