New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 991688	39 (0.720)	6 (0.120)	6/248	NT	13.4%	coding (310/1464 nt)	der	GTPase Der
	?	NC_002947	= 991712	41 (0.810)					coding (334/1464 nt)	der	GTPase Der

AAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATTCCGGTGGCTGGCTCCCAGGGCCGTGGTATCAACGCCTTGATGGAGGCCGTGCTCG  >  NC_002947/991569‑991856                                                                                                                                                |                                                                                                                                                 aaGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGcggcg                                                                                                                                             >  3:313337‑M2/1‑144 (MQ=255)    tGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGcg                                                                                                                                                <  5:325215‑M2/143‑3 (MQ=255)    tGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGcg                                                                                                                                                >  6:325215‑M2/1‑141 (MQ=255)       gCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTg                                                                                                                                       >  1:37725/1‑149 (MQ=255)          tGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGtt                                                                                                                                    <  6:83766/149‑1 (MQ=255)            gACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTg                                                                                                                                   <  6:57241/148‑1 (MQ=255)            gACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGc                                                                                                                                  <  1:255510/149‑1 (MQ=255)                aaaaaaTGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCcaac                                                                                                                              <  2:37725/149‑1 (MQ=255)                  aaaaTGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCcaacaa                                                                                                                            <  5:52227/149‑1 (MQ=255)                      tGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATc                                                                                                                        <  2:220399/149‑1 (MQ=255)                         ccGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGac                                                                                                                     <  1:173303/149‑1 (MQ=255)                               aGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATc                                                                                                               <  6:163010/149‑1 (MQ=255)                                gTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATc                                                                                                               >  1:220492/1‑148 (MQ=255)                                gTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATc                                                                                                               >  3:58016/1‑148 (MQ=255)                                 tCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGa                                                                                                             >  4:293989/1‑149 (MQ=255)                                   gCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGAcc                                                                                                           <  1:8324/149‑1 (MQ=255)                                        tGGCCATTGAAGAAGCCGACTATGTGCTGTTTCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGAcccc                                                                                                         >  2:250930/1‑146 (MQ=255)                                        tGGCCATTGAAGAAGCCGACTATGTGCTGTTTCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGAcccc                                                                                                         <  1:250930/146‑1 (MQ=255)                                            cATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTg                                                                                                  >  4:97287/1‑149 (MQ=255)                                             aTTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGAATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGc                                                                                                 >  1:244950/1‑149 (MQ=255)                                              ttGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGcc                                                                                                <  6:321350/149‑1 (MQ=255)                                                 aagaagCCGACTATGTGCTGTTCATGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGAAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCcgc                                                                                             >  5:150790/1‑149 (MQ=255)                                                                tgCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGcc                                                                               <  4:58016/148‑1 (MQ=255)                                                                   tGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATg                                                                           >  6:23483/1‑149 (MQ=255)                                                                           gTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATggg                                                                   <  3:97287/149‑1 (MQ=255)                                                                                 gCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGGGGAACATGGCGGCGATCCTGGTTGCCAACAAGATGGACAACATCGACCCCGAGGTTGCCGGCGCCGAATTCTCGCCAATGGGCATGGGTAACg                                                              <  1:41497/148‑1 (MQ=255)                                                                                 gCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGc                                                             >  4:28276/1‑149 (MQ=255)                                                                                           gTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATTCCGGtg                                                   <  7:109375/149‑1 (MQ=255)                                                                                                 cTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGCTCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATTCCGGtggctggc                                             >  4:80248/1‑149 (MQ=255)                                                                                                 cTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATTCCGGtggctggc                                             <  2:234885/149‑1 (MQ=255)                                                                                                              gatgatCGCCGAGCACCTGCGCAAGCGGAACAAGGcggcgatcatctggtctgccgcagtcatacccgcacgggcatcaaccaggaacagcacatagtcggcttcttcaatggccatgagcgactgctcggccattttttcgtccatgc                                <  2:224763‑M2/149‑115 (MQ=255)                                                                                                                tgatCGCCGAGCACCTGCGCAAGCGGAACAAGGcggcgatcatctggtctgccgcagtcatacccgcacgggcatcaaccaggaacagcacatagtcggcttcttcaatggccacgagcgactgctcggccattttttcgtccatgcc                               <  6:140317‑M2/148‑116 (MQ=255)                                                                                                                 gatCGCCGAGCACCTGCGCAAGCGGAACAAGGcggcgatcatctggtctgccgcagtcatacccgcacgggcatcaaccaggaacagcacatagtcggcttcttcaatggccatgagcgactgctcggccattttttcgtccatgccca                             <  1:240575‑M2/149‑118 (MQ=255)                                                                                                                  atCGCCGAGCACCTGCGCAAGCGGAACAAGGcggcgatcatctggtctgccgcagtcatacccgcacgggcatcaaccaggaacagcacatagtcggcttcttcaatggccatgagcgactgctcggccattttttcgtccatgcccac                            <  3:139892‑M2/149‑119 (MQ=255)                                                                                                                   tCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATTCCGGTGGCTGGCTCCCAGGGCCGTTGTATc                           <  5:23483/149‑1 (MQ=255)                                                                                                                   tCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATTCCGGTGGCTGGCTCCCAGGGCCGTGGTAt                            >  1:4596/1‑148 (MQ=255)                                                                                                                    cGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATTCCGGTGGCTGGCTCCCAggg                                     <  8:197239/138‑1 (MQ=255)                                                                                                                    cGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATTCCGGTGGCTGGCTCCCAggg                                     >  7:197239/1‑138 (MQ=255)                                                                                                                      ccGAGCACCTGCGCAAGCGGAACAAGGcggcgatcatctggtctgccgcagtcatacccgcacgggcatcaaccaggaacagcacatagtcggcttcttcaatggccatgagcaactgctcggccattttttcgtccatgcccacttcg                        <  7:264809‑M2/149‑123 (MQ=255)                                                                                                                       cGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATTCCGGtggc                                                 <  4:212541/123‑1 (MQ=255)                                                                                                                       cGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGGTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATTCCGGtggc                                                 >  3:212541/1‑123 (MQ=255)                                                                                                                            aCCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATTCCGGTGGCTGGCTCCCAGGGCCGTGGTATCAACGCCTTg                  <  2:4596/149‑1 (MQ=255)                                                                                                                              cTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCTAATTCTCGCCAATGGGCATGGGTAACGCCATTCCGGTGGCTGGCTCCCAGGGCCGTGGTATCAACGCCTTGAt                <  6:150790/149‑1 (MQ=255)                                                                                                                                    aaGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATTCCGGTGGCTGGCTCCCAGGGCCGTGGTATCAACGCCTTGATGGAGGc          >  3:287757/1‑149 (MQ=255)                                                                                                                                       cGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATTCCGGTGGCTGGCTCCCAGGGCCGTGGTATCAACGCCTTGATGGAGGCCGt       >  2:65473/1‑149 (MQ=255)                                                                                                                                        ggAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATTCCGGTGGCTGGCTCCCAGGGCCGTGGTATCAACGCCtt                   <  7:188595/136‑1 (MQ=255)                                                                                                                                        ggAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATTCCGGTGGCTGGCTCCCAGGGCCGTGGTATCAACGCCtt                   >  8:188595/1‑136 (MQ=255)                                                                                                                                         gAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATTCCGGTGGCTGGCTCCCAGGGCCGTGGTATCAACGCCTTGATGGAGGCCGTGc     >  6:200408/1‑149 (MQ=255)                                                                                                                                          aaCAAGGcggcgatcatctggtctgccgcagtcatacccgcacgggcatcaaccaggaacagcacatagtcggcttcttcaatggccatgagcgactgctcggccattttttcgtccatgcccacttcgtcaccggtgataccaccggt    >  1:224763‑M2/1‑7 (MQ=255)                                                                                                                                           aCAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATTCCGGTGGCTGGCTCCCAGGGCCGTGGTATCAACGCCTTGATGGAGGCCGTGCTc   <  1:65473/149‑1 (MQ=255)                                                                                                                                           aCAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATTCCGGTGGCTGGCTCCCAGGGCCGTGGTATCAACGCCTTGATGGAGGCCGTGCTc   >  8:255658/1‑149 (MQ=255)                                                                                                                                            cAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATTCCGGTGGCTGGCTCCCAGGGCCGTGGTATCAACGCCTTGATGGAGGCCGTGCTCg  <  6:247697/149‑1 (MQ=255)                                                                                                                                                |                                                                                                                                                 AAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGCGGAACAAGGCGGCGATCCTGGTTGCCAACAAGATCGACAACATCGACCCCGACGTTGCCCGCGCCGAATTCTCGCCAATGGGCATGGGTAACGCCATTCCGGTGGCTGGCTCCCAGGGCCGTGGTATCAACGCCTTGATGGAGGCCGTGCTCG  >  NC_002947/991569‑991856

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.