New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1543781	51 (0.950)	4 (0.080)	4/252	NT	7.4%	coding (585/1245 nt)	mdfA	multidrug MFS transporter
	?	NC_002947	= 1543810	51 (0.990)					coding (614/1245 nt)	mdfA	multidrug MFS transporter

GTGGGCACCTTGCTGCTGCAATGGCTGGACTGGCGCTGGCTGTTCGTGGCATTCGCCATCGGCGCGGTGCTGACCTGGCTGCTGCTGTACCGGTTGATGCCGGAAACCCTGGGCGTGGAGCGCCGTGACGGCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAGTTGCTGGGCAACCGCCGCTTCGTTGCAGGCAGCGCCGCCCTTGGGTTGGTCGGATTGCCGCTGATTGGCTGGATTGGCCTGTCGCCGGTGCTGCTGATTCAC  >  NC_002947/1543665‑1543955                                                                                                                                                  |                                                                                                                                                   gtggGCACCTTGCTGCTGCAATGGCTGGACTGGCGCTGGCTGTTCGTGGCATTCGCCATCGGCGCGGTGCTGACCTGGCTGCTGCTGTACCGGTTGATGCCGGAAACCCTGGGCGTGGAGCGCCGTGACGGCTCGCGGCTGGCGTTcac                                                                                                                                                 >  5:164079‑M2/1‑146 (MQ=255)        ccTTGCTGCTGCAATGGCTGGACTGGCGCTGGCTGTTCGTGGCATTCGCCATCGGCGCGGTGCTGACCTGGCTGCTGCTGTACCGGTTGATGCCGGAAACCCTGGGCGTGGAGCGCCGTGACGGCTCGCGGCTGGCGTTCACGCCGAtt                                                                                                                                          <  1:314817/149‑1 (MQ=255)                  gcAATGGCTGGACTGGCGCTGGCTGTTCGTGGCATTCGCCATCGGCGCGGTGCTGACCTGGCTGCTGCTGTACCGGTTGATGCCGGAAACCCTGGGCGTGGAGCGCCGTGACGGCTCGCGGCTGGCGTTCACGCCGATTCACCtgctgc                                                                                                                                <  2:29799/149‑1 (MQ=255)                     aTGGCTGGACTGGCGCTGGCTGTTCGTGGCATTCGCCATCGGCGCGGTGCTGACCTGGCTGCTGCTGTACCGGTTGATGCCGGAAACCCTGGGCGTGGAGCGCCGTGACGGCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCAc                                                                                                                             <  4:141757/149‑1 (MQ=255)                         cTGGACTGGCGCTGGCTGTTCGTGGCATTCGCCATCGGCGCGGTGCTGACCTGGCTGCTGCTGTACCGGTTGATGCCGGAAACCCTGGGCGTGGAGCGCCGTGACGGCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGtt                                                                                                                         <  6:57756/149‑1 (MQ=255)                         cTGGACTGGCGCTGGCTGTTCGTGGCATTCGCCATCGGCGCGGTGCTGACCTGGCTGCTGCTGTACCGGTTGATGCCGGAAACCCTGGGCGTGGAGCGCCGTGACGGCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGtt                                                                                                                         >  2:35311/1‑149 (MQ=255)                            gACTGGCGCTGGCTGTTCGTGGCATTCGCCATCGGCGCGGTGCTGACCTGGCTGCTGCTGTACCGGTTGATGCCGGAAACCCTGGGCGTGGAGCGCCGTGACGGCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGc                                                                                                                      >  7:251985/1‑149 (MQ=255)                             aCTGGCGCTGGCTGTTCGTGGCATTCGCCATCGGCGCGGTGCTGACCTGGCTGCTGCTGTACCGGTTGATGCCGGAAACCCTGGGCGTGGAGCGCCGTGACGGCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCg                                                                                                                     >  2:138005/1‑149 (MQ=255)                              cTGGCGCTGGCTGTTCGTGGCATTCGCCATCGGCGCGGTGCTGACCTGGCTGCTGCTGTACCGGTTGATGCCGGAAACCCTGGGCGTGGAGCGCCGTGACGGCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCgg                                                                                                                    <  5:249795/149‑1 (MQ=255)                              cTGGCGCTGGCTGTTCGTGGCATTCGCCATCGGCGCGGTGCTGACCTGGCTGCTGCTGTACCGGTTGATGCCGGAAACCCTGGGCGTGGAGCGCCGTGACGGCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCgg                                                                                                                    <  1:138005/149‑1 (MQ=255)                               tGGCGCTGGCTGTTCGTGGCATTCGCCATCGGCGCGGTGCTGACCTGGCTGCTGCTGTACCGGTTGATGCCGGAAACCCTGGGCGTGGAGCGCCGTGACGGCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCggg                                                                                                                   >  6:81836/1‑149 (MQ=255)                               tGGCGCTGGCTGTTCGTGGCATTCGCCATCGGCGCGGTGCTGACCTGGCTGCTGCTGTACCGGTTGATGCCGGAAACCCTGGGCGTGGAGCGCCGTGACGGCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCggg                                                                                                                   >  2:2343/1‑149 (MQ=255)                                 gcgcTGGCTGTTCGTGGCATTCGCCATCGGCGCGGTGCTGACCTGGCTGCTGCTGTACCGGTTGATGCCGGAAACCCTGGGCGTGGAGCGCCGTGACGGCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGc                                                                                                                  <  8:316942/148‑1 (MQ=255)                                        ctgTTCGTGGCATTCGCCATCGGCGCGGTGCTGACCTGGCTGCTGCTGTACCGGTTGATGCCGGAAACCCTGGGCGTGGAGCGCCGTGACGGCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGc                                                                                                           >  2:163582/1‑147 (MQ=255)                                           ttCGTGGCATTCGCCATCGGCGCGGTGCTGACCTGGCTGCTGCTGTACCGGTTGATGCCGGAAACCCTGGGCGTGGAGCGCCGTGACGGCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAg                                                                                                        <  1:72895/147‑1 (MQ=255)                                               tGGCATTCGCCATCGGCGCGGTGCTGACCTGGCTGCTGCTGTACCGGTTGATGCCGGAAACCCTGGGCGTGGAGCGCCGTGACGGCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAGTTGCTg                                                                                                  <  2:105620/149‑1 (MQ=255)                                               tGGCATTCGCCATCGGCGCGGTGCTGACCTGGCTGCTGCTGTACCGGTTGATGCCGGAAACCCTGGGCGTGGAGCGCCGTGACGGCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAGTTGCTg                                                                                                  <  1:2343/149‑1 (MQ=255)                                                 gCATTCGCCATCGGCGCGGTGCTGACCTGGCTGCTGCTGTACCGGTTGATGCCGGAAACCCTGGGCGTGGAGCGCCGTGACGGCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAGTTGCTgg                                                                                                 <  2:183849/148‑1 (MQ=255)                                                        ccATCGGCGCGGTGCTGACCTGGCTGCTGCTGTACCGGTTGATGCCGGAAACCCTGGGCGTGGAGCGCCGTGACGGCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAGTTGCTGGGCAAccgc                                                                                         >  7:6552/1‑149 (MQ=255)                                                         cATCGGCGCGGTGCTGACCTGGCTGCTGCTGTACCGGTTGATGCCGGAAACCCTGGGCGTGGAGCGCCGTGACGGCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAGTTGCTGGGCAAccgcc                                                                                        >  6:254231/1‑149 (MQ=255)                                                            cGGCGCGGTGCTGACCTGGCTGCTGCTGTACCGGTTGATGCCGGAAACCCTGGGCGTGGAGCGCCGTGACGGCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAGTTGCTGGGCAACCGCCGCt                                                                                     >  6:134420/1‑149 (MQ=255)                                                                  ggTGCTGACCTGGCTGCTGCTGTACCGGTTGATGCCGGAAACCCTGGGCGTGGATCGCCGTGACGGCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAGTTGCTGGGCAACCGCCGCTTCGTTg                                                                               <  2:137279/149‑1 (MQ=255)                                                                   gTGCTGACCTGGCTGCTGCTGTACCGGTTGATGCCGGAAACCCTGGGCGTGGAGCGCCGTGACGGCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAGTTGCTGGGCAACCGCCGCTTCGTTgc                                                                              <  2:4485/149‑1 (MQ=255)                                                                   gTGCTGACCTGGCTGCTGCTGTACCGGTTGATGCCGGAAACCCTGGGCGTGGAGCGCCGTGACGGCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAGTTGCTGGGCAACCGCCGCTTCGTTg                                                                               >  6:45191/1‑148 (MQ=255)                                                                      cTGACCTGGCTGCTGCTGTACCGGTTGATGCCGGAAACCCTGGGCGTGGAGCGCCGTGACGGCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAGTTGCTGGGCAACCGCCGCTTCGTTgcagg                                                                           <  5:45191/149‑1 (MQ=255)                                                                      cTGACCTGGCTGCTGCTGTACCGGTTGATGCCGGAAACCCTGGGCGTGGAGCGCCGTGACGGCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAGTTGCTGGGCAACCGCCGCTTCGTTgcagg                                                                           <  5:254231/149‑1 (MQ=255)                                                                      cTGACCTGGCTGCTGCTGTACCGGTTGATGCCGGAAACCCTGGGCGTGGAGCGCCGTGACGGCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAGTTGCTGGGCAACCGCCGCTTCGTTgcag                                                                            <  5:134420/148‑1 (MQ=255)                                                                         aCCTGGCTGCTGCTGTACCGGTTGATGCCGGAAACCCTGGGCGTGGAGCGCCGTGACGGCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAGTTGCTGGGCAACCGCCGCTTCGTTgcaggcag                                                                        >  4:150252/1‑149 (MQ=255)                                                                              gctgctgctGTACCGGTTGATGCCGGAAACCCTGGGCGTGGAGCGCCGCGACGGCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAGTTGCTGGGCAACCGCCGCTTCGTTGCAGGCAGcgcc                                                                    <  2:255171/148‑1 (MQ=255)                                                                              gctgctgctGTACCGGTTGATGCCGGAAACCCTGGGCGGGGAGCGCCGCGACGGCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAGTTGCTGGGCAACCGCCGCTTCGTTGCAGGCAGcgcc                                                                    <  6:152356/148‑1 (MQ=255)                                                                                tgctgctgTACCGGTTGATGCCGGAAACCCTGGGCGTGGAGCGCCGTGACGGCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAGTTGCTGGGCAACCGCCGCTTCGTTGCAGGCAGCgccgcc                                                                 >  3:246932/1‑149 (MQ=255)                                                                                 gcggctgGACCGGTTGATGCCGGAAACCCTGGGCGGGGAGCGCCGGGACGGCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAGTTGCTGGGCAACCGCCGCTTCGTTGCAGGCAGCGCCGccc                                                                <  8:120923/146‑1 (MQ=255)                                                                                     ctgTACCGGTTGATGCCGGAAACCCTGGGCGTGGAGCGCCGTGACGGCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAGTTGCTGGGCAAcc                                                                                           >  1:99634/1‑118 (MQ=255)                                                                                     ctgTACCGGTTGATGCCGGAAACCCTGGGCGTGGAGCGCCGTGACGGCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAGTTGCTGGGCAAcc                                                                                           <  2:99634/118‑1 (MQ=255)                                                                                       gTACCGGTTGATGCCGGAAACCCTGGGCGTGGAGCGCCGTGACGGCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAGTTGATGGGCAACCGCCGCTTCGTTGCAGGCAGCGCCGCCCTTGGGt                                                          >  2:334578/1‑149 (MQ=255)                                                                                            ggTTGATGCCGGAAACCCTGGGCGTGGAGCGCCGTGACGGCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAGTTGCTGGGCAACCGCCGCTTCGTTGCAGGCAGCGCCGCCCTTGGGTTGGTc                                                     <  1:77251/149‑1 (MQ=255)                                                                                                gATGCCGGAAACCCTGGGCGTGGAGCGCCGTGACGGCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAGTTGCTGGGCAACCGCCGCTTCGTTGCAGGCAGCGCCGCCCTTGGGTTGGTCGGAt                                                 >  5:242307/1‑149 (MQ=255)                                                                                                 aTGCCGGAAACCCTGGGCGTGGAGCGCCGTGACGGCTCGCGGCGGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTATCGGCCAGTTGCTGGGCAACCGCCGCTTCGTTGCAGGCAGCGCCGCCCTTGGGTTGGTCGGa                                                  <  1:267281/148‑1 (MQ=255)                                                                                                    ccGGAAACCCTGGGCGTGGAGCGCCGTGACGGCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAGTTGCTGGGCAACCGCCGCTTCGTTGCAGGCAGCGCCGCCCTTGGGTTGGTCGGATTGcc                                             <  5:81836/149‑1 (MQ=255)                                                                                                     cGGAAACCATGGGCGTGGAGCGCCGTGACGGCAAGCGCCTCGCGTTCACCCCGATTCACCTCCTGCCACTGTAGGCGGCCTAT‑GGCCAGTTGCACGGCAACCGCATCTTCGTTGCAGGCAGCCCAGACCTACGGTTCGTCGGAATGcc                                             >  8:126316/1‑148 (MQ=255)                                                                                                             cTGGGCGTGGAGCGCCGTGACGGCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAGTTGCTGGGCAACCGCCGCTTCGTTGCAGGCAGCGCCGCCCTTGGGTTGGTCGGATTGCCGCTGATTgg                                    <  8:251985/149‑1 (MQ=255)                                                                                                              tGGGCGTGGAGCGCCGTGACGGCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAGTTGCTGGGCAACCGCCGCTTCGTTGCAGGCAGCGCCGCCCTTGGGTTGGTCGGATTGCCGCTGATTGGc                                   >  5:173309/1‑149 (MQ=255)                                                                                                                  cGTGGAGCGCCGTGACGGCTCGCGGCTGGCGTTcacgcccagggtttccggcatcaaccggtacagcagcagccaggtcagcaccgcgccgatggcgaatgccacgaacagccagcgccagtccagccattgcagcagcaaggtg                                    >  3:184999‑M2/1‑33 (MQ=255)                                                                                                                  cGTGGAGCGCCGTGACGGCTCGCGGCTGGCGTTcacgcccagggtttccggcatcaaccggtacagcagcagccaggtcagcaccgcgccgatggcgaatgccacgaacagccagcgccagtccagccattgcagcagcaaggtg                                    <  4:184999‑M2/145‑113 (MQ=255)                                                                                                                   gTGGAGCGCCGTGACGGCTCGCGGCTGGCGTTcacgcccagggtttccggcatcaaccggtacagcagcagccaggtcagcaccgcgccgatggcgaatgccacgaacagccagcgccagtccagccattgcagcagcaaggt                                     >  8:66170‑M2/1‑32 (MQ=255)                                                                                                                   gTGGAGCGCCGTGACGGCTCGCGGCTGGCGTTcacgcccagggtttccggcatcaaccggtacagcagcagccaggtcagcaccgcgccgatggcgaatgccacgaacagccagcgccagtccagccattgcagcagcaaggt                                     <  7:66170‑M2/143‑112 (MQ=255)                                                                                                                       aGCGCCGTGACGGCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAGTTGCTGGGCAACCGCCGCTTCGTTGCAGGCAGCGCCGCCCTTGGGTTGGTCGGATTGCCGCTGATTGGCTGGATTGGc                          <  1:334578/149‑1 (MQ=255)                                                                                                                             gTGACGGCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAGTTGCTGGGCAACCGCCGCTTCGTTGCAGGCAGCGCCGCCCTTGGGTTGGTCGGATTGCCGCTGATTGGCTGGATTGGCCTGTCg                    >  6:259855/1‑149 (MQ=255)                                                                                                                               gACGGCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAGTTGCTGGGCAACCGCCGCTTCGTTGCAGGCAGCGCCGCCCTTGGGTTGGTCGGATTGCCGCTGATTGGCTGGATTGGCCTGTCGcc                  >  4:95661/1‑149 (MQ=255)                                                                                                                                  ggCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAGTTGCTGGGCAACCGCCGCTTCGTTGCAGGCAGCGCCGCCCTTGGGTTGGTCGGATTGCCGCTGATTGGCTGGATTGGCCTGTCGCCgg                <  4:154972/148‑1 (MQ=255)                                                                                                                                  ggCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAGTTGCTGGGCAACCGCCGCTTCGTTGCAGGCAGCGCCGCCCTTGGGTTGGTCGGATTGCCGCTGATTGGCTGGATTGGCCTGTCGCCgg                >  3:154972/1‑148 (MQ=255)                                                                                                                                  ggCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAGTTGCTGGGCAACCGCCGCTTCGTTGCAGGCAGCGCCGCCCTTGGGTTGGTCGGATTGCCGCTGATTGGCTGGATTGGCCTGTCGCCGGt               >  6:272550/1‑149 (MQ=255)                                                                                                                                    cTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAGTTGCTGGGCAACCGCCGCTTCGTTGCAGGCAGCGCCGCCCTTGGGTTGGTCGGATTGCCGCTGATTGGCTGGATTGGCCTGTCGCCGGtgc             <  4:246932/149‑1 (MQ=255)                                                                                                                                    cTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAGTTGCTGGGCAACCGCCGCTTCGTTGCAGGCAGCGCCGCCCTTGGGTTGGTCGGATTGCCGCTGATTGGCTGGATTGGCCTGTCGCCGGtgc             >  1:210490/1‑149 (MQ=255)                                                                                                                                       gcgGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAGTTGCTGGGCAACCGCCGCTTCGTTGCAGGCAGCGCCGCCCTTGGGTTGGTCGGATTGCCGCTGATTGGCTGGATTGGCCTGTCGCCGGtgctgc          <  1:35311/149‑1 (MQ=255)                                                                                                                                        cgGCTGGCGTTCACGCCGATTCTCCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAGTTGCTGGGCAACCGCCGCTTCGTTGCAGGCAGCGCCGCCCTTGGGTTGGTCGGATTGCCGCTGATTGGCTGGATTGGCCTGTCGCCGGTgctgct         <  6:314500/149‑1 (MQ=255)                                                                                                                                          gCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAGTTGCTGGGCAACCGCCGCTTCGTTGCAGGCAGCGCCGCCCTTGGGTTGGTCGGATTGCCGCTGATTGGCTGGATTGGCCTGTCGCCGGTGCTGCTGa       <  6:242307/149‑1 (MQ=255)                                                                                                                                              gCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAGTTGCTGGGCAACCGCCGCTTCGTTGCAGGCAGCGCCGCCCTTGGGTTGGTCGGATTGCCGCTGATTGGCTGGATTGGCCTGTCGCCGGtg              <  6:306984/138‑1 (MQ=255)                                                                                                                                              gCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAGTTGCTGGGCAACCGCCGCTTCGTTGCAGGCAGCGCCGCCCTTGGGTTGGTCGGATTGCCGCTGATTGGCTGGATTGGCCTGTCGCCGGtg              >  5:306984/1‑138 (MQ=255)                                                                                                                                              gCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAGTTGCTGGGCAACCGCCGCTTCGTTGCAGGCAGCGCCGCCCTTGGGTTGGTCGGATTGCCGCTGATTGGCTGGATTGGCCTGTCGCCGGTGCTGCTGATTc    <  5:272550/148‑1 (MQ=255)                                                                                                                                               cGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAGTTGCTGGGCAACCGCCGCTTCGTTGCAGGCAGCGCCGCCCTTGGGTTGGTCGGATTGCCGCTGATTGGCTGGATTGGCCTGTCGCCGGTGCTGCTGATTCAc  <  3:150252/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                   GTGGGCACCTTGCTGCTGCAATGGCTGGACTGGCGCTGGCTGTTCGTGGCATTCGCCATCGGCGCGGTGCTGACCTGGCTGCTGCTGTACCGGTTGATGCCGGAAACCCTGGGCGTGGAGCGCCGTGACGGCTCGCGGCTGGCGTTCACGCCGATTCACCTGCTGCCACTGTTGGCGGGCTAT‑GGCCAGTTGCTGGGCAACCGCCGCTTCGTTGCAGGCAGCGCCGCCCTTGGGTTGGTCGGATTGCCGCTGATTGGCTGGATTGGCCTGTCGCCGGTGCTGCTGATTCAC  >  NC_002947/1543665‑1543955

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.