New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2299834	49 (0.910)	3 (0.060)	3/254	NT	6.2%	coding (288/3645 nt)	sbcC	exonuclease subunit SbcC
	?	NC_002947	= 2299877	44 (0.850)					coding (245/3645 nt)	sbcC	exonuclease subunit SbcC

AAGCTTTGACGGCTGTGCTGCAGTTTGCCGTTGGCCTTGTCGCGGGCGCGGTTGGCTTCCCAGCGGGCGCGGTAGCGGCGGCCGTCGATGCCGACGAAATCGACCTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGTCGGAGGTGGGGATGTCGCCGTCGGCATCCGGCACCTTGGCCTCACGGCCAATGGCATTGAGGCGCGGCACGGTGCCGAACAGCGCCAGGCACAGGGCGTCAAGCAGGGTGCTCTTGCCGGCACCGGTAGGCCCGGTG  >  NC_002947/2299730‑2300017                                                                                                                                                    |                                                                                                                                             aaGCTTTGACGGCTGTGCTGCAGTTTGCCGTTGGCCTTGTCGCGGGCGCGGTTGGCTTCCCAGCGGGCGCGGTAGCGGCGGCCGTCGATGCCGACGAAATCGACCTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGg                                                                                                                                             <  7:270632‑M2/149‑2 (MQ=255)   gCTTTGACGGCTGTGCTGCAGTTTGCCGTTGGCCTTGTCGCGGGCGCGGTTGGCTTCCCAGCGGGCGCGGTAGCGGCGGCCGTCGATGCCGACGAAATCGACCTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGggt                                                                                                                                           >  5:205056‑M2/1‑146 (MQ=255)     tttGACGGCTGTGCTGCAGTTTGCCGTTGGCCTTGTCGCGGGCGCGGTTGGCTTCCCAGCGGGCGCGGTAGCGGCGGCCGTCGATGCCGACGAAATCGACCTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGggtcg                                                                                                                                         <  2:246479‑M2/149‑6 (MQ=255)        gACGGCTGTGCTGCAGTTTGCCGTTGGCCTTGTCGCGGGCGCGGTTGGCTTCCCAGCGGGCGCGGTAGCGGCGGCCGTCGATGCCGACGAAATCGACCTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGTCGGa                                                                                                                                       <  3:140045/148‑1 (MQ=255)         aCGGCTGTGCTGCAGTTTGCCGTTGGCCTTGTCGCGGGCGCGGTTGGCTTCCCAGCGGGCGCGGTAGCGGCGGCCGTCGATGCCGACGAAATCGACCTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGTCGGAgg                                                                                                                                     >  1:306486/1‑149 (MQ=255)          cGGCTGTGCTGCAGTTTGCCGTTGGCCTTGTCGCGGGCGCGGTTGGCTTCCCAGCGGGCGCGGTAGCGGCGGCCGTCGATGCCGACGAAATCGACCTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGGCGGAGGt                                                                                                                                    >  7:160223/1‑149 (MQ=255)              tgtgCTGCAGTTTGCCGTTGGCCTTGTCGCGGGCGCGGTTGGCTTCCCAGCGGGCGCGGTAGCGGCGGCCGTCGATGCCGACGAAATCGACCTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGTCGGAGGTgggg                                                                                                                                <  2:306486/149‑1 (MQ=255)                tgctgcAGTTTGCCGTTGGCCTTGTCGCGGGCGCGGTTGGCTTCCCAGCGGGCGCGGTAGCGGCGGCCGTCGATGCCGACGAAATCGACCTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGTCGGAGGTGGGGAt                                                                                                                              <  2:123917/149‑1 (MQ=255)                  ctgcAGTTTGCCGTTGGCCTTGTCGCGGGCGCGGTTGGCTTCCCAGCGGGCGCGGTAGCGGCGGCCGTCGATGCCGACGAAATCGACCTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGTCGGAGGTGGGGATg                                                                                                                             <  3:137609/148‑1 (MQ=255)                   tgcAGTTTGCCGTTGGCCTTGTCGCGGGCGCGGTTGGCTTCCCAGCGGGCGCGGTAGCGGCGGCCGTCGATGCCGACGAAATCGACCTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGTCGGAGGTGGGGATGTc                                                                                                                           >  1:184628/1‑149 (MQ=255)                     cAGTTTGCCGTTGGCCTTGTCGCGGGCGCGGTTGGCTTCCCAGCGGGCGCGGTAGCGGCGGCCGTCGATGCCGACGAAATCGACCTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGTCGGAGGTGGGGATGTc                                                                                                                           <  1:88804/147‑1 (MQ=255)                          tGCCGTTGGCCTTGTCGCGGGCGCGGTTGGCTTCCCAGCGGGCGCGGTAGCGGCGGCCGTCGATGCCGACGAAATCGACCTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGTCGGAGGTggg                                                                                                                                 <  3:261027/136‑1 (MQ=255)                          tGCCGTTGGCCTTGTCGCGGGCGCGGTTGGCTTCCCAGCGGGCGCGGTAGCGGCGGCCGTCGATGCCGACGAAATCGACCTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGTCGGAGGTggg                                                                                                                                 >  4:261027/1‑136 (MQ=255)                          tGCCGTTGGCCTTGTCGCGGGCGCGGTTGGCTTCCCAGCGGGCGCGGTAGCGGCGGCCGTCGATGCCGACGAAATCGACCTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGTCGGAGGTGGGGATGTCGCCGTCg                                                                                                                    >  4:222810/1‑149 (MQ=255)                              gTTGGCCTTGTCGCGGGCGCGGTTGGCTTCCCAGCGGGCGCGGTAGCGGCGGCCGTCGATGCCGACGAAATCGACCTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGTCGGAGGTGGGGATGTCGCCGTCGGCAt                                                                                                                >  7:89692/1‑149 (MQ=255)                               ttGGCCTTGTCGCGGGCGCGGTTGGCTTCCCAGCGGGCGCGGTAGCGGCGGCCGTCGATGCCGACGAAATCGACCTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGTCGGAGGTGGGGATGTCGCCGTCGGCATc                                                                                                               >  3:149767/1‑149 (MQ=255)                                   ccTTGTCGCGGGCGCGGTTGGCTTCCCAGCGGGCGCGGTAGCGGCGGCCGTCGATGCCGACGAAATCGACCTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGTCGGAGGTGGGGATGTCGCCGTCGGCATCCgg                                                                                                            >  3:35952/1‑148 (MQ=255)                                    cTTGTCGCGGGCGCGGTTGGCTTCCCAGCGGGCGCGGTAGCGGCGGCCGTCGATGCCGACGAAATCGACCTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGTCGGAGGTGGGGATGTCGCCGTCGGCATCCGGCa                                                                                                          >  4:135763/1‑149 (MQ=255)                                    cTTGTCGCGGGCGCGGTTGGCTTCCCAGCGGGCGCGGTAGCGGCGGCCGTCGATGCCGACGAAATCGACCTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGTCGGAGGTGGGGATGTCGCCGTCGGCATCCGGCa                                                                                                          >  6:22281/1‑149 (MQ=255)                                       gTCGCGGGCGCGGTTGGCTTCCCAGCGGGCGCGGTAGCGGCGGCCGTCGATGCCGACGAAATCGACCTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGTCGGAGGTgggg                                                                                                                                <  6:287069/124‑1 (MQ=255)                                       gTCGCGGGCGCGGTTGGCTTCCCAGCGGGCGCGGTAGCGGCGGCCGTCGATGCCGACGAAATCGACCTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGTCGGAGGTGGGGATGTCGCCGTCGGCATCCGGCACCt                                                                                                       >  6:51495/1‑149 (MQ=255)                                        tCGCGGGCGCGGTTGGCTTCCCAGCGGGCGCGGTAGCGGCGGCCGTCGATGCCGACGAAATCGACCTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGTCGGAGGTgggg                                                                                                                                >  5:327531/1‑123 (MQ=255)                                        tCGCGGGCGCGGTTGGCTTCCCAGCGGGCGCGGTAGCGGCGGCCGTCGATGCCGACGAAATCGACCTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGTCGGAGGTgggg                                                                                                                                <  6:327531/123‑1 (MQ=255)                                          gcgGGCGCGGTTGGCTTCCCAGCGGGCGCGGTAGCGGCGGCCGTCGATGCCGACGAAATCGACCTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGTCGGAGGTGGGGATGTCGCCGTCGGCATCCGGCACCTTg                                                                                                     <  2:184628/148‑1 (MQ=255)                                           cgGGCGCGGTTGGCTTCCCAGCGGGCGCGGTAGCGGCGGCCGTCGATGCCGACGAAATCGACCTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGTCGGAGGTGGGGATGTCGCCGTCGGCATCCGGCACCTTGGc                                                                                                   <  1:246479/149‑1 (MQ=255)                                           cgGGCGCGGTTGGCTTCCCAGCGGGCGCGGTAGCGGCGGCCGTCGATGCCGACGAAATCGACCTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGTCGGAGGTGGGGATGTCGCCGTCGGCATCCGGCACCTTGGc                                                                                                   <  5:226746/149‑1 (MQ=255)                                           cgGGCGCGGTTGGCTTCCCAGCGGGCGCGGTAGCGGCGGCCGTCGATGCCGACGAAATCGACCTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGTCGGAGGTGGGGATGTCGCCGTCGGCATCCGGCACCTTGGc                                                                                                   <  3:197506/149‑1 (MQ=255)                                              gcgcGGTTGGCTTCCCAGCGGGCGCGGTAGCGGCGGCCGTCGATGCCGACGAAATCGACCTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGTCGGAGGTGGGGATGTCGCCGTCGGCATCCGGCACCTTGGCCTc                                                                                                <  5:315160/149‑1 (MQ=255)                                                    ttGGCTTCCCAGCGGGCGCGGTAGCGGCGGCCGTCGATGCCGACGAAATCGACCTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGTCGGAGGTGGGGATGTCGCCGTCGGCATCCGGCACCTTGGCCTCACGGcc                                                                                          <  4:35952/149‑1 (MQ=255)                                                       gCTTCCCAGCGGGCGCGGTAGCGGCGGCCGTCGATGCCGACGAAATCGACCTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGTCGGAGGTGGGGATGTCGCCGTCGGCATCCGGCACCTTGGCCTCACGGCCAAt                                                                                       <  8:160223/149‑1 (MQ=255)                                                        cTTCCCAGCGGGCGCGGTAGCGGCGGCCGTCGATGCCGACGAAATCGACCTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGTCGGAGGTGGGGATGTCGCCGTCGGCATCCGGCACCTTGGCCTCACGGc                                                                                           <  2:255941/144‑1 (MQ=255)                                                        cTTCCCAGCGGGCGCGGTAGCGGCGGCCGTCGATGCCGACGAAATCGACCTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGTCGGAGGTGGGGATGTCGCCGTCGGCATCCGGCACCTTGGCCTCACGGc                                                                                           >  1:255941/1‑144 (MQ=255)                                                        cTTCCCAGCGGGCGCGGTAGCGGCGGCCGTCGATGCCGACGAAATCGACCTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGTCGGAGGTGGGGATGTCGCCGTCGGCATCCGGCACCTTGGCCTCACGGCCAATg                                                                                      >  3:172630/1‑149 (MQ=255)                                                            ccAGCGGGCGCGGTAGCGGCGGCCGTCGATGCCGACGAAATCGACCTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGTCGGAGGTGGGGATGTCGCCGTCGGCATCCGGCACCTTGGCCTCACGGCCAATGGCAt                                                                                  >  8:264660/1‑149 (MQ=255)                                                                               cggcCGTCGATGCCGACGAAATCGACCTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGTCGGAGGTGGGGATGTCGCCGTCGGCATCCGGCACCTTGGCCTCACGGCCAATGGCATTGAGGCGCGGCACGGTGcc                                                               <  3:135763/149‑1 (MQ=255)                                                                               cggcCGTCGATGCCGACGAAATCGACCTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGTCGGAGGTGGGGATGTCGCCGTCGGCATCCGGCACCTTGGCCTCACGGCCAATGGCATTGAGGCGCGGCACGGTGcc                                                               <  5:51495/149‑1 (MQ=255)                                                                                 gcCGTCGATGCCGACGAAATCGACCTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGTCGGAGGTGGGGATGTCGCCGTCGGCATCCGGCACCTTGGCCTCACGGCCAATGGCATTGAGGCGCGGCACGGTGCCGa                                                             <  3:222810/149‑1 (MQ=255)                                                                                          gCCGACGAAATCGACCTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGTCGGAGGTGGGGATGTCGCCGTCGGCATCCGGCACCTTGGCCTCACGGCCAATGGCATTGAGGCGCGGCACGGTGCCGAACAgcgc                                                      >  3:176780/1‑147 (MQ=255)                                                                                             gacgaAATCGACCTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGTCGGAGGTGGGGATGTCGCCGTCGGCATCCGGCACCTTGGCCTCACGGCCAATGGCATTGAGGCGCGGCACGGTGCCGAACAGCGCCAgg                                                  >  2:254433/1‑148 (MQ=255)                                                                                                        ccTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGggtcgatttcgtcggcatcgacggccgccgctaccgcgcccgctgggaagccaaccgcgcccgcgacaaggccaacggcaaactgcagcacagccgtcaaa                                         >  3:63130‑M2/1‑45 (MQ=255)                                                                                                        ccTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGggtcgatttcgtcggcatcgacggccgccgctaccgcgcccgctgggaagccaaccgcgcccgcgacaaggccaacggcaaactgcagcacagccgtcaaa                                         <  4:63130‑M2/146‑102 (MQ=255)                                                                                                         cTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGTCGGAGGTGGGGATGTCGCCGTCGGCATCCGGCACCTTGGCCTCACGGCCAATGGCATTGAGGCGCGGCACGGTGCCGAACAGCGCCa                                                    <  8:312576/134‑1 (MQ=255)                                                                                                          tCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGTCGGAGGTGGGGATGTCGCCGTCGGCATCCGGCACCTTGGCCTCACGGCCAATGGCATTGAGGCGCGGCACGGTGCCGAACAgc                                                        >  2:269482/1‑129 (MQ=255)                                                                                                          tCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGTCGGAGGTGGGGATGTCGCCGTCGGCATCCGGCACCTTGGCCTCACGGCCAATGGCATTGAGGCGCGGCACGGTGCCGAACAgc                                                        <  1:269482/129‑1 (MQ=255)                                                                                                              cAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGTCGGAGGTGGGGATGTCGCCGTCGGCATCCGGCACCTTGGCCTCACGGCCAATGGCATTGAGGCGCGGCACGGTGCCGAACAGCGCCAGGCACAGGGCGTCAAGCAgg                                <  5:22281/149‑1 (MQ=255)                                                                                                                   ccGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGggtcgatttcgtcggcatcgacggccgccgctaccgcgcccgctgggaagccaaccgcgcccgcgacaaggccaacggcaaactgcagcacagccgtcaaagcttctacgacctc                           <  3:130270‑M2/149‑116 (MQ=255)                                                                                                                    cGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGTCGGAGGTGGGGATGTCGCCGTCGGCATCCGGCACCTTGGCCTCACGGCCAATGGCATTGAGGCGCGGCACGGTGCCGAACAGCGCCAGGCACAGGGCGTCAAGCAGGGTGctc                          >  3:48479/1‑149 (MQ=255)                                                                                                                           ggTGCCACGGCGCAGCAGGTTGCGCGGGTCGGAGGTGGGGATGTCGCCGTCGGCATCCGGCACCTTGGCCTCACGGCCAATGGCATTGAGGCGCGGCACGGTGCCGAACAGCGCCAGGCACAGGGCGTCAAGCAGGGTGCTCTTGCCgg                   >  8:15960/1‑149 (MQ=255)                                                                                                                                 aCGGCGCAGCAGGTTGCGCGGGTCGGAGGTGGGGATGTCGCCGTCGGCATCCGGCACCTTGGCCTCACGGCCAATGGCATTGAGGCGCGGCACGGTGCCGAACAGCGCCAGGCACAGGGCGTCAAGCAGGGTGCTCTTGCCGGCACCgg             >  6:335324/1‑149 (MQ=255)                                                                                                                                         gcagGTTGCGCGGGTCGGAGGTGGGGATGTCGCCGTCGGCATCCGGCACCTTGGCCTCACGGCCAATGGCATTGAGGCGCGGCACGGTGCCGAACAGCGCCAGGCACAGGGCGTCAAGCAGGGTGCTCTTGCCGGCACCGGTAGGCCCg     <  7:264660/149‑1 (MQ=255)                                                                                                                                          cagGTTGCGCGGGGCGGAGGTGGGGATGTCGCCGTCGGCATCCGGCACCTTGGCCTCACGGCCAATGGCATTGAGGCGCGGCACGGTGCCGAACAGCGCCAGGCACAGGGCGTCAAGCAGGGTGCTCTTGCCGGCACCGGTAGGCCCgg    <  8:270632/149‑1 (MQ=255)                                                                                                                                           agGTTGCGCGGGTCGGAGGTGGGGATGTCGCCGTCGGCATCCGGCACCTTGGCCTCACGGCCAATGGCATTGAGGCGCGGCACGGTGCCGAACAGCGCCAGGCACAGGGCGTCAAGCAGGGTGCTCTTGCCGGCACCGGTAGGCCCGGt   <  1:254433/149‑1 (MQ=255)                                                                                                                                            ggTTGCGCGGGTCGGAGGTGGGGATGTCGCCGTCGGCATCCGGCACCTTGGCCTCACGGCCAATGGCATTGAGGCGCGGCACGGTGCCGAACAGCGCCAGGCACAGGGCGTCAAGCAGGGTGCTCTTGCCGGCACCGGTAGGCCCGGTg  <  7:15960/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                             AAGCTTTGACGGCTGTGCTGCAGTTTGCCGTTGGCCTTGTCGCGGGCGCGGTTGGCTTCCCAGCGGGCGCGGTAGCGGCGGCCGTCGATGCCGACGAAATCGACCTCGGCAAAACCGCTGCCGGTGCCACGGCGCAGCAGGTTGCGCGGGTCGGAGGTGGGGATGTCGCCGTCGGCATCCGGCACCTTGGCCTCACGGCCAATGGCATTGAGGCGCGGCACGGTGCCGAACAGCGCCAGGCACAGGGCGTCAAGCAGGGTGCTCTTGCCGGCACCGGTAGGCCCGGTG  >  NC_002947/2299730‑2300017

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.