New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2436620 | 49 (0.910) | 3 (0.060) | 3/244 | NT | 6.2% | intergenic (+198/‑461) | PP_2134/fadB | transposase/enoyl‑CoA hydratase/3‑hydroxyacyl‑CoA dehydrogenase |
? | NC_002947 | = 2436655 | 45 (0.900) | intergenic (+233/‑426) | PP_2134/fadB | transposase/enoyl‑CoA hydratase/3‑hydroxyacyl‑CoA dehydrogenase |
TCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATAAGCCGATGCTTGTGGTCAATCGCTGACATGAATGACCGG > NC_002947/2436507‑2436801 | tCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGt > 5:230366/1‑149 (MQ=255) gAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTcg > 2:248770‑M2/1‑147 (MQ=255) ggTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGGCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTcgcc < 7:312655‑M2/149‑5 (MQ=255) cTGAGAGAGGCCGTTGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTcgccgctt > 8:291362‑M2/1‑140 (MQ=255) tGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTcgccgctttg < 1:20173‑M2/149‑11 (MQ=255) agagGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGt > 4:93651/1‑148 (MQ=255) tGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTgcg > 6:100172/1‑148 (MQ=255) tttACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGaaaa < 4:279799/148‑1 (MQ=255) tttACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGaaaa < 4:275234/148‑1 (MQ=255) tttACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGaaaa < 3:93651/148‑1 (MQ=255) aCTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGAAAAGGc < 2:124341/148‑1 (MQ=255) tGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGAAAAGGCcag > 8:209135/1‑149 (MQ=255) gAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGAAAAGGCcagg > 6:248629/1‑149 (MQ=255) aaaaTTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGAAAAGGCcag < 2:124772/147‑1 (MQ=255) aaaTTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGAAAAGGCcaggc < 8:312655/148‑1 (MQ=255) cTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGt > 2:55925/1‑149 (MQ=255) gCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTattc < 1:55925/149‑1 (MQ=255) ccATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTattca < 6:275990/149‑1 (MQ=255) ccATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTattca < 5:100172/149‑1 (MQ=255) aTAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGc < 8:139975/106‑1 (MQ=255) aTAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGc > 7:139975/1‑106 (MQ=255) aTAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTattcatt < 1:42513/149‑1 (MQ=255) gAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTcaa < 6:230366/149‑1 (MQ=255) gAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGCGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTcaa < 7:178666/149‑1 (MQ=255) tctcCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTcaagc > 6:307061/1‑148 (MQ=255) cTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTg > 2:195720/1‑149 (MQ=255) cTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTg > 7:158807/1‑149 (MQ=255) cTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCCCCGCTTTGCGT‑TCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTg > 6:59058/1‑149 (MQ=255) ggggCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAgt < 7:132820/149‑1 (MQ=255) gCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAgtg > 8:285145/1‑147 (MQ=255) gCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTa < 8:158807/149‑1 (MQ=255) aGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGcc > 1:329738/1‑149 (MQ=255) gCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCtt < 7:209135/149‑1 (MQ=255) gCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCtt < 7:183390/149‑1 (MQ=255) gTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTgg < 5:248629/147‑1 (MQ=255) gTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGct < 5:307061/149‑1 (MQ=255) tctgttctgtAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTcg > 5:108533/1‑149 (MQ=255) ttctgtAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCgcgc > 1:82010/1‑148 (MQ=255) gtAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGTAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTa < 1:76118/124‑1 (MQ=255) gtAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTa > 2:76118/1‑124 (MQ=255) tAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCgcgcaagcg > 1:43079/1‑148 (MQ=255) cGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTcgccgctttgtcgttacagaacagattgaccagcctggatgcccccgtaggagattctatggccgga > 7:109918‑M2/1‑48 (MQ=255) cGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTcgccgctttgtcgttacagaacagattgaccagcctggatgcccccgtaggagattctatggccgga < 8:109918‑M2/115‑68 (MQ=255) aaGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTcaag < 5:94827/101‑1 (MQ=255) aaGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTcaag > 6:94827/1‑101 (MQ=255) aGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTcgccgctttgtcgttacagaacagattgaccagcctggatgcccccgtaggagattctatggccggaggcaaattttcagtaaaaacgccatcggcctctctcagc < 6:97281‑M2/148‑107 (MQ=255) gcTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCCCCGCTTTGCGT‑TCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATAAGCCGAt < 5:59058/149‑1 (MQ=255) cTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTGTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATAAGCCGAt > 1:246339/1‑149 (MQ=255) tCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATAAGCCGATGc > 1:70415/1‑149 (MQ=255) gCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATAAGCCGATGCTtg > 5:323687/1‑149 (MQ=255) cATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATAAGCCGATGCTtgt < 2:43079/149‑1 (MQ=255) aCCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATAAGCCGATGCTTGTGGt < 1:195720/148‑1 (MQ=255) ccTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATAAGCTGATGCTTGTGGTCaa > 1:95820/1‑149 (MQ=255) cTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATAAGCCGATGCTTGTGGTCAAt > 1:272961/1‑149 (MQ=255) aaGGGGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATAAGCCGATGCTTGTGGTCAATCg < 2:82010/148‑1 (MQ=255) gtggggtgCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATAAGCCGATGCTTGTGGTCAATCGCTGACa > 6:202021/1‑149 (MQ=255) aGTCGCCGCTTTGCGT‑TCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATAAGCCGATGCTTGTGGTCAATCGCTGACATGAATGACCgg < 2:329738/149‑1 (MQ=255) | TCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGT‑TCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATAAGCCGATGCTTGTGGTCAATCGCTGACATGAATGACCGG > NC_002947/2436507‑2436801 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |