New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 291674249 (0.910)4 (0.080) 4/256 NT 7.8% coding (5762/10827 nt) PP_2561 hemolysin‑type calcium‑binding bacteriocin
?NC_002947 = 2916797 47 (0.900)coding (5817/10827 nt) PP_2561 hemolysin‑type calcium‑binding bacteriocin

GCTCGACTTGACCAACGCCGTGCGTACCGGGCACCAGTTCCTTGCCGACATCGCCCACAATGCCGTGCCGGTGTTCAGTGGCGGCGTGCTGGCGCCGGATGCCGACAACGTGGCCGGCAATGCCGTGCCGGTCAACCCGCAGACCGGTGCCAACCTGGCCTACGACAACGAACTGCTGGACGCGCACTACATCGCCGGTGACGGCCGGGTCAACGAGAACATCGGCCTGACCGCCGTGCATGCGATCTTCCACTCCGAGCACAACCGGCTGGTGGCGCAGACCATGG  >  NC_002947/2916650‑2916936
                                                                                                                                                   |                                                                                                                                            
gCTCGACTTGACCAACGCCGTGCGTACCGGGCACCAGTTCCTTGCCGACATCGCCCACAATGCCGTGCCGGTGTTCAGTGGCGGCGTGCTGGCGCCGGATGCCGACAACGTGGCCGGCAATGCCGTGCCGGTCAACCCGCAGACCGGTg                                                                                                                                             <  2:177511‑M2/149‑2 (MQ=255)
         gACCAACGCCGTGCGTACCGGGCACCAGTTCCTTGCCGACATCGCCCACAATGCCGTGCCGGTGTTCAGTGGCGGCGTGCTGGCGCCGGATGCCGACAACGTGGCCGGCAATGCCGTGCCGGTCAACCCGCAGACCGGTGCCAACCt                                                                                                                                      <  1:177511/147‑1 (MQ=255)
         gACCAACGCCGTGCGTACCGGGCACCAGTTCCTTGCCGACATCGCCCACAATGCCGTGCCGGTGTTCAGTGGCGGCGTGCTGGCGCCGGATGCCGACAACGTGGCCGGCAATGCCGTGCCGGTCAACCCGCAGACCGGTGCCAACCTgg                                                                                                                                    >  7:162512/1‑149 (MQ=255)
         gACCAACGCCGTGCGTACCGGGCACCAGTTCCTTGCCGACATCGCCCACAATGCCGTGCCGGTGTTCAGTGGCGGCGTGCTGGCGCCGGATGCCGACAACGTGGCCGGCAATGCCGTGCCGGGCAACCCGCAGACCGGTGCCAACCTg                                                                                                                                     <  7:156320/148‑1 (MQ=255)
          aCCAACGCCGTGCGTACCGGGCACCAGTTCCTTGCCGACATCGCCCACAATGCCGTGCCGGTGTTCAGTGGCGGCGTGCTGGCGCCGGATGCCGACAACGTGGCCGGCAATGCCGTGCCGGTCAACCCGCAGACCGGTGCCAACCTGGc                                                                                                                                   >  5:238615/1‑149 (MQ=255)
           ccAACGCCGTGCGTACCGGGCACCAGTTCCTTGCCGACATCGCCCACAATGCCGTGCCGGTGTTCAGTGGCGGCGTGCTGGCGCCGGATGCCGACAACGTGGCCGGCAATGCCGTGCCGGTCAACCCGCAGACCGGTGCCAACCTGGcc                                                                                                                                  >  5:8798/1‑149 (MQ=255)
            cAACGCCGTGCGTACCGGGCACCAGTTCCTTGCCGACATCGCCCACAATGCCGTGCCGGTGTTCAGTGGCGGCGTGCTGGCGCCGGATGCCGACAACGTGGCCGGCAATGCCGTGCCGGTCAACCCGCAGACCGGTGCCAACCTGGcc                                                                                                                                  >  6:155502/1‑148 (MQ=255)
             aaCGCCGTGCGTACCGGGCACCAGTTCCTTGCCGACATCGCCCACAATGCCGTGCCGGTGTTCAGTGGCGGCGTGCTGGCGCCGGATGCCGACAACGTGGCCGGCAATGCCGTGCCGGTCAACCCGCAGACCGGTGCCAACCTGGCCTa                                                                                                                                >  5:57392/1‑149 (MQ=255)
                           cGGGCACCAGTTCCTTGCCGACATCGCCCACAATGCCGTGCCGGTGTTCAGTGGCGGCGTGCTGGCGCCGGATGCCGACAACGTGGCCGGCAATGCCGTGCCGGTCAACCCGCAGACCGGTGCCAACCTGGCCTACGACAACGAActg                                                                                                                   <  5:327544/148‑1 (MQ=255)
                           cGGGCACCAGTTCCTTGCCGACATCGCCCACAATGCCGTGCCGGTGTTCAGTGGCGGCGTGCTGGCGCCGGATGCCGACAACGTGGCCGGCAATGCCGTGCCGGTCAACCCGCAGACCGGTGCCAACCTGGCCTACGACAACGAActg                                                                                                                   >  6:327544/1‑148 (MQ=255)
                            gggCACCAGTTCCTTGCCGACATCGCCCACAATGCCGTGCCGGTGTTCAGTGGCGGCGTGCTGGCGCCGGATGCCGACAACGTGGCCGGCAATGCCGTGCCGGTCAACCCGCAGACCGGTGCCAACCTGGCCTACGACAACGAActgct                                                                                                                 <  1:188269/149‑1 (MQ=255)
                              gCACCAGTTCCTTGCCGACATCGCCCACAATGCCGTGCCGGTGTTCAGTGGCGGCGTGCTGGCGCCGGATGCCGACAACGTGGCCGGCAATGCCGTGCCGGTCAACCCGCAGACCGGTGCCAACCTGGCCTACGACAACGAACTGCTgg                                                                                                               <  6:57392/149‑1 (MQ=255)
                                  cAGTTCCTTGCCGACATCGCCCACAATGCCGTGCCGGTGTTCAGTGGCGGCGTGCTGGCGCCGGATGCCGACAACGTGGCCGGCAATGCCGTGCCGGTCAACCCGCAGACCGGTGCCAACCTGGCCTACGACAACGAACTGCTGGAcgc                                                                                                          >  3:189383/1‑149 (MQ=255)
                                  cAGTTCCTTGCCGACATCGCCCACAATGCCGTGCCGGTGTTCAGTGGCGGCGTGCTGGCGCCGGATGCCGACAACGTGGCCGGCAATGCCGTGCCGGTCAACCCGCAGACCGGTGCCAACCTGGCCTACGACAACGAACTGCTGGAcgc                                                                                                          <  6:267496/149‑1 (MQ=255)
                                   aGTTCCTTGCCGACATCGCGAACAATGCCGTGCCGGTGTTCGGTGGCGGCGTGCTGGCGCCGGATGCCGACAACGTTGCCGGCTATGCCGTGCAGGTCAACCCGCAGACCGGTGCCAACCTGGCCTACGACAACGAACTGCTGGAcgcg                                                                                                         <  8:84538/149‑1 (MQ=255)
                                     ttCCTTGCCGACATCGCCCACAATGCCGTGCCGGTGTTCAGTGGCGGCGTGCTGGCGCCGGATGCCGACAACGTGGCCGGCAATGCCGTGCCGGTCAACCCGCAGACCGGTGCCAACCTGGCCTACGACAACGAACTGCTGGACGCGCa                                                                                                       <  7:76277/149‑1 (MQ=255)
                                       ccTTGACTACATCGCCGACAATGCCGTGCCGTTGTTCAGTGGCGGCGTGCTGGCGCCGGATGCCGACAACGTGGCCGGCAATGCCGTGCCGGTCAACCCGCAGACCGGTGCCAACCTGGCCTACGACAACGAACTGCTGGACGCGCAc                                                                                                      <  7:47554/148‑1 (MQ=255)
                                        cTTGCCGACATCGCCCACAATGCCGTGCCGGTGTTCAGTGGCGGCGTGCTGGCGCCGGATGCCGACAACGTGGCCGGCAATGCCGTGTCGGTCAACCCGCAGACCGGTGCCAACCTGGCCTACGACAACGAACTGCTGGACGCGCACTa                                                                                                    >  2:245832/1‑149 (MQ=255)
                                        cTTGCCGACATCGCCCACAATGCCGTGCCGGTGTTCAGTGGCGGCGTGCTGGCGCCGGATGCCGACAACGTGGCCGGCAATGCCGTGCCGGTCAACCCGCAGACCGGTGCCAACCTGGCCTACGACAACGAACTGCTGGACGCGCACt                                                                                                     <  2:338004/148‑1 (MQ=255)
                                         ttGCCGACATCGCCCACAATGCCGTGCCGGTGTTCAGTGGCGGCGTGCTGGCGCCGGATGCCGACAACGTGGCCGGCAATGCCGTGCCGGTCAACCCGCAGACCGGTGCCAACCTGGCCTACGACAACGAACTGCTGGACGCGCACTa                                                                                                    >  4:307389/1‑148 (MQ=255)
                                              gACATCGCCCACAATGCCGTGCCGGTGATCAGTGGCGGCGTGCTGGCGCCGGATGCCGACAACGTGGCCGGCAATGCCGTGCCGGTCAACCCGCAGACCGGTGCCAACCTGGCCTACGACAACGAACTGCTGGACGCGCACTACATCGc                                                                                              >  1:15608/1‑149 (MQ=255)
                                               aCATCGCCCACAATGCCGTGCCGGTGTTCAGTGGCGGCGTGCTGGCGCCGGATGCCGACAACGTGGCCGGCAATGCCGTGCCGGTCAACCCGCAGACCGGTGCCAACCTGGCCTACGACAACGAACTGCTGGACGCGCACTACATCGcc                                                                                             <  6:238615/149‑1 (MQ=255)
                                                       cacaATGCCGTGCCGGTGTTCAGTGGCGGCGTGCTGGCGCCGGATGCCGACAACGTGGCCGGCAATGCCGTGCCGGTCAACCCGCAGACCGGTGCCAACCTGGCCTACGACAACGAACTGCTGGACGCGCACTACATCGCCGGTGACgg                                                                                     <  3:307389/149‑1 (MQ=255)
                                                                 tgccgGTGTTCAGTGGCGGCGTGCTGGCGCCGGATGCCGACAACGTGGCCGGCAATGCCGTGCCGGTCAACCCGCAGACCGGTGCCAACCTGGCCTACGACAACGAACTGCTGGACGCGCACTACATCGCCGGTGACGGCCGGGTCAAc                                                                           <  4:170947/149‑1 (MQ=255)
                                                                 tgccgGTGTTCAGTGGCGGCGTGCTGGCGCCGGATGCCGACAACGTGGCCGGCAATGCCGTGCCGGTCAACCCGCAGACCGGTGCCAACCTGGCCTACGACAACGAACTGCTGGACGCGCACTACATCGCCGGTGACGGCCGGGTCAAc                                                                           >  3:170947/1‑149 (MQ=255)
                                                                 tgccgGTGTTCAGTGGCGGCGTGCTGGCGCCGGATGCCGACAACGTGGCCGGCAATGCCGTGCCGGTCAACCCGCAGACCGGTGCCAACCTGGCCTACGACAACGAACTGCTGGACGCGCACTACATCGCCGGTGACGGCCGGGTCAAc                                                                           <  8:241712/149‑1 (MQ=255)
                                                                      gtgtTCAGTGGCGGCGTGCTGGCGCCGGATGCCGACAACGTGGCCGGCAATGCCGTGCCGGTCAACCCGCAGACCGGTGCCAACCTGGCCTACGACAACGAACTGCTGGACGCGCACTACATCGCCGGTGACGGCCGGGTCAACGAGaa                                                                      >  5:179999/1‑149 (MQ=255)
                                                                      gtgtTCAGTGGCGGCGTGCTGGCGCCGGATGCCGACAACGTGGCCGGCAATGCCGTGCCGGTCAACCCGCAGACCGGTGCCAACCTGGCCTACGACAACGAACTGCTGGACGCGCACTACATCGCCGGTGACGGCCGGGTCAACGAGaa                                                                      >  4:203322/1‑149 (MQ=255)
                                                                            aGTGGCGGCGTGCTGGCGCCGGATGCCGACAACGTGGCCGGCAATGCCGTGCCGGTCAACCCGCAGACCGGTGCCAACCTGGCCTACGACAACGAACTGCTGGACGCGCACTACATCGCCGGTGACGGCCGGGTCAACGAGAACATCgg                                                                >  3:148793/1‑149 (MQ=255)
                                                                             gTGGCGGCGTGCTGGCGCCGGATGCCGACAACGTGGCCGGCAATGCCGTGCCGGTCAACCCGCAGACCGGTGCCAACCTGGCCTACGACAACGAACTGCTGGACGCGCACTACATCGCCGGTGACGGCCGGGTCAACGAGAACATCGGc                                                               <  8:96896/149‑1 (MQ=255)
                                                                                tttttgtggtggcggcGTATGCCTAAAACGTGGCCGGAATTGCCGTGCCGGTCAACCCGCAGACCGGTgccagcacgccgccacttaacaccggcacggcattgtgggcgatgtcggcaaggaactggtgcccggtacgcacggcgttg                                                             >  4:40173‑M2/6‑68 (MQ=255)
                                                                                gcggcgTGCTGGCGCCGGATGCCGACAACGTGGCCGGCAATGCCGTGTCGGTCAACCCGCAGACCGGTGCCAACCTGGCCTACGACAACGAACTGCTGGACCGCGCACTACATCGCCGGTGACGGCCGGGTCAACGAGAACATCGGCCt                                                             <  1:245832/149‑1 (MQ=255)
                                                                                      tGCTGGCGCCGGATGCCGACAACGTGGCCGGCAATGCCGTGCCGGTCAACCCGCAGACCGGTgccagcacgccgccactgaacaccggcacggcattgtgggcgatgtcggcaaggaactggtgcccggtacgcacggcgttg                                                             <  3:40173‑M2/143‑82 (MQ=255)
                                                                                        cTGGCGCCGGATGCCGACAACGTGGCCGGCAATGCCGTGCCGGTCAACCCGCAGACCGGTgccagcacgccgccactgaacaccggcacggcattgtgggcgatgtcggcaaggaactggtgcccggtacccacggcgttggtcacgac                                                     <  5:104358‑M2/149‑90 (MQ=255)
                                                                                        cTGGCGCCGGATGCCGACAACGTGGCCGGCAATGCCGTGCCGGTCAACCCGCAGACCGGTGCCAACCTGGCCTACGACAACGAACTGCTGGACGCGCACTACATCGCCGGTGACGGCCGGGTCAACGAGAACATCGGCCTGACCGCCGt                                                    <  5:308491/149‑1 (MQ=255)
                                                                                        cTGGCGCCGGATGCCGACAACGTGGCCGGCAATGCCGTGCCGGTCAACCCGCAGACCGGTGCCAACCTGGCCTACGACAACGAACTGCTGGACGCGCACTACATCGCCGGTGACGGCCGGGTCAACGAGAACATCGGCCTGACCGCCGt                                                    <  3:57130/149‑1 (MQ=255)
                                                                                           gcgcCGGATGCCGACAACGTGGCCGGCAATGCCGTGCCGGTCAACCCGCAGACCGGTGCCAACCTGGCCTACGACAACGAACTGCTGGACGCGCACTACATCGCCGGTGACGGCCGGGTCAACGAGAACATCGGCCTGACCGCCGTGc                                                  <  6:8798/148‑1 (MQ=255)
                                                                                             gcCGGATGCCGACAACGTGGCCGGCAATGCCGTGCCGGTCAACCCGCAGACCGGTGCCAACCTGGCCTACGACAACGAACTGCTGGACGCGCACTACATCGCCGGTGACGGCCGGGTCAACGAGAACATCGGCCTGACCGCCGTGCATg                                               <  2:15608/149‑1 (MQ=255)
                                                                                                 gATGCCGACAACGTGGCCGGCAATGCCGTGCCGGTCAACCCGCAGACCGGTGCCAACCTGGCCTACGACAACGAACTGCTGGACGCGCACTACATCGCCGGTGACGGCCGGGTCAACGAGAACATCGGCCTGACCGCCGTGCATGCGAt                                           >  4:320081/1‑149 (MQ=255)
                                                                                                     ccGTCAACGGGGCCGGCAATGGCGTGGCGGTCAACCCGCATACCGGTgccagcacgccgccactgaacaccggcacggcattgtgggcgatgtcggcaatgaactggtgcccggtacgcacggcgttggtcaagtcgagcggtgccagc                                        >  6:104358‑M2/1‑47 (MQ=255)
                                                                                                       gACAACGTGGCCGGCAATGCCGTGCCGGTCAACCCGCAGACCGGTGCCAACCTGGCCTACGACAACGAACTGCTGGACGCGCACTACATCGCCGGTGACGGCCGGGTCAACGAGAAc                                                                     <  5:213276/117‑1 (MQ=255)
                                                                                                       gACAACGTGGCCGGCAATGCCGTGCCGGTCAACCCGCAGACCGGTGCCAACCTGGCCTACGACAACGAACTGCTGGACGCGCACTACATCGCCGGTGACGGCCGGGTCAACGAGAAc                                                                     >  6:213276/1‑117 (MQ=255)
                                                                                                       gACAACGTGGCCGGCAATGCCGTGCCGGTCAACCCGCAGACCGGTGCCAACCTGGCCTACGACAACGAACTGCTGGACGCGCACTACATCGCCGGTGACGGCCGGGTCAACGAGAACATCGGc                                                               >  2:295418/1‑123 (MQ=255)
                                                                                                       gACAACGTGGCCGGCAATGCCGTGCCGGTCAACCCGCAGACCGGTGCCAACCTGGCCTACGACAACGAACTGCTGGACGCGCACTACATCGCCGGTGACGGCCGGGTCAACGAGAACATCGGc                                                               <  1:295418/123‑1 (MQ=255)
                                                                                                                     cAATGCCGTGCCGGTCAACCCGCAGACCGGTGCCAACCTGGCCTACGACAACGAACTGCTGGACGCGCACTACATCGCCGGTGACGGCCGGGTCAACGAGAACATCGGCCTGACCGCCGTGCATGCGATCTTCCACTCCGAGCACAAcc                       <  3:320081/149‑1 (MQ=255)
                                                                                                                             tgccgGTCAACCCGCAGACCGCTGCCAACCTGGCCTACGACAACGAACTGCTGGACGCGCACTACATCGCCGGTGACGGCCGGGTCAACGAGAACATCGGCCTGACCGCCGTGCATGCGATCTTCCACTCCGAGCACAACCGGCtggtg               <  4:189383/149‑1 (MQ=255)
                                                                                                                                cgGTCAACCCGCAGACCGGTGCCAACCTGGCCTACGACAACGAACTGCTGGACGCGCACTACATCGCCGGTGACGGCCGGGTCAACGAGAACATCGGCCTGACCGCCGTGCATGCGATCTTCCACTCCGAGCACAACCGGCTGGTGgcg            <  4:148793/149‑1 (MQ=255)
                                                                                                                                     aaCCCGCAGACCGGTGCCAACCTGGCCTACGACAACGAACTGCTGGACGCGCACTACATCGCCGGTGACGGCCGGGTCAACGAGAACATCGGCCTGACCGCCGTGCATGCGATCTTCCACTCCGAGCACAAc                        >  6:257051/1‑132 (MQ=255)
                                                                                                                                     aaCCCGCAGACCGGTGCCAACCTGGCCTACGACAACGAACTGCTGGACGCGCACTACATCGCCGGTGACGGCCGGGTCAACGAGAACATCGGCCTGACCGCCGTGCATGCGATCTTCCACTCCGAGCACAAc                        <  5:257051/132‑1 (MQ=255)
                                                                                                                                      aCCCGCAGACCGGTGCCAACCTGGCCTACGACAACGAACTGCTGGACGCGCACTACATCGCCGGTGACGGCCGGGTCAACGAGAACATCGGCCTGACCGCCGTGCATGCGATCTTCCACTCCGAGCACAACCGGCTGGTGGCGCAGAc       >  3:201643/1‑148 (MQ=255)
                                                                                                                                        ccGCAGACCGGTGCCAACCTGGCCTACGACAACGAACTGCTGGACGCGCACTACATCGCCGGTGACGGCCGGGTCAACGAGAACATCGGCCTGACCGCCGTGCATGCGATCTTCCACTCCGAGCACAACCGGCTGGTGGCGCAGACCAt    >  6:176535/1‑149 (MQ=255)
                                                                                                                                         cGCAGACCGGTGCCAACCTTGCCTACGACAACGAACTGCTGGACGCGCACTACATCGCCGGTGACGGCCGGGTCAACGAGAACATCGGCCTGACCGCCGTGCATGCGATCTTCCACTCCGAGCACAACCGGCTGGTGGCGCAGACCATg   <  8:162512/149‑1 (MQ=255)
                                                                                                                                          gCAGACCGGTGCCAACCTGGCCTACGACAACGAACTGCTGGACGCGCACTACATCGCCGGTGACGGCCGGGTCAGCGAGAACATCGGCCTGACCGCCGTGCATGCGATCTTCCACTCCGAGCACAACCGGCTGGTGGCGCAGACCATgg  >  7:270319/1‑149 (MQ=255)
                                                                                                                                          gCAGACCGGTGCCAACCTGGCCTACGACAACGAACTGCTGGACGCGCACTACATCGCCGGTGACGGCCGGGTCAACGAGAACATCGGCCTGACCGCCGTGCATGCGATCTTCCACTCCGAGCACAACCGGCTGGTGGCGCAGACCATgg  <  5:176535/149‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                            
GCTCGACTTGACCAACGCCGTGCGTACCGGGCACCAGTTCCTTGCCGACATCGCCCACAATGCCGTGCCGGTGTTCAGTGGCGGCGTGCTGGCGCCGGATGCCGACAACGTGGCCGGCAATGCCGTGCCGGTCAACCCGCAGACCGGTGCCAACCTGGCCTACGACAACGAACTGCTGGACGCGCACTACATCGCCGGTGACGGCCGGGTCAACGAGAACATCGGCCTGACCGCCGTGCATGCGATCTTCCACTCCGAGCACAACCGGCTGGTGGCGCAGACCATGG  >  NC_002947/2916650‑2916936

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.