New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4167368	44 (0.820)	3 (0.060)	3/250	NT	6.2%	coding (108/1212 nt)	creA	creatinase
	?	NC_002947	= 4167395	49 (0.960)					coding (81/1212 nt)	creA	creatinase

GACCACCTTGTCCTGGGTGATCACCAGCGCATAAGGGCGGCCGAACGAGCAGTAAAGGAAATCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCGGGGTTCCTTGTCGTTGTGAGCACGCTGTTCAGGCCGGCCGCCTGAGAAGCATTGCAACAGAA  >  NC_002947/4167248‑4167542                                                                                                                                                    |                                                                                                                                                    gACCACCTTGTCCTGGGTGATCACCAGCGCATAAGGGCGGCCGAACGAGCAGTAAAGGAAATCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGc                                                                                                                                                    >  7:223024‑M2/1‑148 (MQ=255)           tCCTGGGTGATATACAGCGCATAAGGGCGGCCGAACGAGCAGTAAAGGAAATCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTa                                                                                                                                          <  7:126144/149‑1 (MQ=255)            ccTGGGTGATCTCCAGCGCATAAGGGCGGCCGAACGAGCAGTAAAGGAAATCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTa                                                                                                                                          <  4:217282/148‑1 (MQ=255)             cTGGGTGATCACCAGCGCATAAGGGCGGCCGAACGAGCAGTAAAGGAAATCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTAtt                                                                                                                                        >  8:64719/1‑149 (MQ=255)             cTGGGTGATCACCAGCGCATAAGGGCGGCCGAACGAGCAGTAAAGGAAATCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTAtt                                                                                                                                        >  5:67661/1‑149 (MQ=255)             cTGGGTGATCACCAGCGCATAAGGGCGGCCGAACGAGCAGTAAAGGAAATCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTAt                                                                                                                                         >  4:20433/1‑148 (MQ=255)                  tGATCACCAGCGCATAAGGGCGGCCGAACGAGCAGTAAAGGAAATCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGa                                                                                                                                   <  6:67661/149‑1 (MQ=255)                     tCACCAGCGCATAAGGGCGGCCGAACGAGCAGTAAAGGAAATCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCg                                                                                                                                >  5:28825/1‑149 (MQ=255)                      cACCAGCGCATAAGGGCGGCCGAACGAGCAGTAAAGGAAATCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCg                                                                                                                                >  4:47360/1‑148 (MQ=255)                         cAGCGCATAAGGGCGGCCGAACGAGCAGTAAAGGAAATCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGaa                                                                                                                             >  5:273182/1‑148 (MQ=255)                              cATAAGGGCGGCCGAACGAGCAGTAAAGGAAATCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGtt                                                                                                                       <  7:64719/149‑1 (MQ=255)                               aTAAGGGCGGCCGAACGAGCAGTAAAGGAAATCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTg                                                                                                                      >  1:25782/1‑149 (MQ=255)                               aTAAGGGCGGCCGAACGAGCAGTAAAGGAAATCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTg                                                                                                                      >  6:259651/1‑149 (MQ=255)                                  aGGGCGGCCGAACGAGCAGTAAAGGAAATCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGc                                                                                                                    <  3:47360/148‑1 (MQ=255)                                       ggcCGAACGAGCAGTAAAGGAAATCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCAcc                                                                                                              <  6:273182/149‑1 (MQ=255)                                              cGAGCAGTAAAGGAAATCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGc                                                                                                       >  5:332320/1‑149 (MQ=255)                                                    gTAAAGGAAATCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGc                                                                                                 <  6:129709/149‑1 (MQ=255)                                                         ggAAATCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGAtt                                                                                            >  6:111557/1‑149 (MQ=255)                                                             aTCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCa                                                                                        <  5:201297/149‑1 (MQ=255)                                                              tCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAg                                                                                       <  6:28825/149‑1 (MQ=255)                                                               cGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGAt                                                                                             >  8:88757/1‑142 (MQ=255)                                                               cGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGAt                                                                                             <  7:88757/142‑1 (MQ=255)                                                                  tGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTgg                                                                                                                     <  4:121845/115‑1 (MQ=255)                                                                  tGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTgg                                                                                                                     >  3:121845/1‑115 (MQ=255)                                                                   gTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCt                                                                                  >  5:113125/1‑149 (MQ=255)                                                                    tAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCtt                                                                                 >  5:22749/1‑149 (MQ=255)                                                                      aTAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTgg                                                                               <  3:20433/149‑1 (MQ=255)                                                                         gTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAg                                                                                                                          >  1:242713/1‑103 (MQ=255)                                                                         gTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAg                                                                                                                          <  2:242713/103‑1 (MQ=255)                                                                         gTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCa                                                                            >  4:161588/1‑149 (MQ=255)                                                                            gACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGAt                                                                                             >  5:94962/1‑129 (MQ=255)                                                                            gACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGAt                                                                                             <  6:94962/129‑1 (MQ=255)                                                                            gACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCAttt                                                                         >  1:304854/1‑149 (MQ=255)                                                                             aCGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCAttt                                                                         <  6:22749/148‑1 (MQ=255)                                                                                ttGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGCCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCAt                                                                     <  5:259651/149‑1 (MQ=255)                                                                                   tgATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATgg                                                                   <  2:25782/148‑1 (MQ=255)                                                                                              gAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCGGGGTTCCtt                                                       >  5:133313/1‑149 (MQ=255)                                                                                                             gATGTCCTGCTCGGCCATATAGGCCCCCAGCCGGGCGACGCCAGCAGCGTATTCCAGAGCGCAAAAGGTAGCCAGCACCATGTCGCCATTCCAGAATATCACGGTCTTAGGCATTTGCAAGGTCGGGGTTCATTATGGATGTGAGCACg                                        >  8:99614/1‑149 (MQ=255)                                                                                                              aTGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCAttt                                                                         <  7:154004/115‑1 (MQ=255)                                                                                                              aTGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCAttt                                                                         >  8:154004/1‑115 (MQ=255)                                                                                                                  ccTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGcgagcaggacatcgaggcggcaatcttcacctcgtatcacaacgtcaactattacagcgatttcctttactgctcgttcggccgcccttatgcgctggtgatcacccaggac                                     <  1:22567‑M2/147‑113 (MQ=255)                                                                                                                  ccTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCa                                                                                        >  3:105301/1‑96 (MQ=255)                                                                                                                  ccTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCa                                                                                        <  4:105301/96‑1 (MQ=255)                                                                                                                  ccTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGGATTTGCATGGTCGGGGTTCGTTGTCGTTGTGAGCACGCTGtt                                   >  5:302391/1‑149 (MQ=255)                                                                                                                   cTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGcgagcaggacatcgaggcggcaatcttcacctcgtatcacaacgtcaactattacagcgatttcctttactgctcgttcggccgcccttatgcgctggtgatcccccaggacaag                                  <  8:18039‑M2/149‑116 (MQ=255)                                                                                                                    tGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGcgagcaggacatcgaggcggcaatcttcacctcgtatcacaacgtcaactattacagcgatttcctttactgctcgttcggccgcccttatgcgctggtgatcacccaggacaagg                                 <  7:262218‑M2/149‑117 (MQ=255)                                                                                                                     cgatctccATTTAGGCCCGGAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCAGCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCGGGGTTCCTTGTCGTTGTGAGCACGCTGTTCAg                                <  7:316033/143‑1 (MQ=255)                                                                                                                         ggCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCGGGGTTCCTTGTCGTTGTGAGCACGCTGTTCAggccg                            <  5:111557/149‑1 (MQ=255)                                                                                                                          gCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCGGGGTTCCTTGTCGTTGTGAGCACGCTGTTCAggccgg                           <  6:133313/149‑1 (MQ=255)                                                                                                                           ccATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCGGGGTTCCTTGTCGTTGTGAGCACGCTGTTCAggccggc                          >  1:26925/1‑149 (MQ=255)                                                                                                                            cATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCGGGGTTCCTTGTCGTTGTGAGCACGCTGTTcgg                                >  8:316033/1‑140 (MQ=255)                                                                                                                              tataGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGAtt                                                                                            >  8:100616/1‑80 (MQ=255)                                                                                                                                     ccGCAGCCTGGCGTGGCGAGCAGCGTTTTCCTGAGCGGAAAAGGTTGTCGGCACCTTGTCGCCATTTCGGATTTTCAGGGTCTTGGTCATTTGCATGGTCGGGGTTCCTTGTCGTTGTGAGCACGCTGTTCAGGCCGGCCGCCTGAGaa                <  4:112804/149‑1 (MQ=255)                                                                                                                                     ccGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCGGGGTTCCTTGTCGTTGTGAGCACGCTGTTCAGGCCGGCCGCCTgag                  >  5:13465/1‑147 (MQ=255)                                                                                                                                           ccGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCGGGGTTCCTTGTCGTTGTGAGCACGCTGTTCAGGCCGGCCGCCTGAGAAGCATTg          >  2:328602/1‑149 (MQ=255)                                                                                                                                            cGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCGGGGTTCCTTGTCGTTGTGAGCACGCTGTTCAGGCCGGCCGCCTGAGAAGCATTg          >  3:262394/1‑148 (MQ=255)                                                                                                                                                  tGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCGGGGTTCCTTGTCGTTGTGAGCACGCTGTTCAGGCCGGCCGCCTGAGAAGCATTGCAACAg    >  3:104258/1‑148 (MQ=255)                                                                                                                                                    gCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCGGGGTTCCTTGTCGTTGTGAGCACGCTGTTCAGGCCGGCCGCCTGAGAAGCATTGCAACAGaa  <  2:26925/148‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                    GACCACCTTGTCCTGGGTGATCACCAGCGCATAAGGGCGGCCGAACGAGCAGTAAAGGAAATCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCGGGGTTCCTTGTCGTTGTGAGCACGCTGTTCAGGCCGGCCGCCTGAGAAGCATTGCAACAGAA  >  NC_002947/4167248‑4167542

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.