New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4266531 =	59 (1.100)	5 (0.110)	5/230	NT	9.9%	intergenic (‑73/+73)	PP_3738/galP‑IV	transcriptional regulator VanR/porin‑like protein
	?	NC_002947	4266602 =	40 (0.850)					intergenic (‑144/+2)	PP_3738/galP‑IV	transcriptional regulator VanR/porin‑like protein

TCATCCAGGCGACTTCCAAAGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGA‑TAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCGGATGTTGAGGTTCTTCAAAGCCCCGCTCTGGAAGGTGTAGTTCACCTCGGCATCGC  >  NC_002947/4266455‑4266746                                                                                                                                                    |                                                                                                                                                  tCATCCAGGCGACTTCCAAAGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGccc                                                                                                                                                  >  2:163352/1‑149 (MQ=255) cgaccaaccggcgcagcttcaacagtgatctcgaccagacgcgcctgatcgtcagctatccgctgaccttgtagggGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGccc                                                                                                                                                  >  2:71349‑M1/77‑149 (MQ=255)   aTCCAGGCGACTTCCAAAGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGcccc                                                                                                                                                 >  7:205150/1‑148 (MQ=255)      cAGGCGACTTCCAAAGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTa                                                                                                                                               <  5:340924/147‑1 (MQ=255)      cAGGCGACTTCCAAAGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACa                                                                                                                                             <  8:205150/149‑1 (MQ=255)           gACTTCCAAAGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTc                                                                                                                                        <  1:34362/149‑1 (MQ=255)           gACTTCCAAAGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTc                                                                                                                                        <  1:204178/149‑1 (MQ=255)              ttCCAAAGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGc                                                                                                                                     >  3:76902/1‑149 (MQ=255)                 cAAAGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCACGGGTGAACCCGCCCCTACAAGGTCAGCGGa                                                                                                                                  >  6:232016/1‑149 (MQ=255)                  aaaGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGa                                                                                                                                  >  2:53725/1‑148 (MQ=255)                      aCATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGA‑TAGCt                                                                                                                            <  1:53725/149‑1 (MQ=255)                        aTGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCTGAACATGGCACCGTCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGA‑TAGCTGa                                                                                                                          <  6:124909/149‑1 (MQ=255)                          gAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGA‑TAGCTGAc                                                                                                                         >  6:71793/1‑148 (MQ=255)                            gCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGA‑TAGCTGACGAt                                                                                                                      >  3:113447/1‑149 (MQ=255)                                 cATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCACGGGTGAACCCGCCCCTACAAGGTCAGCGGA‑TAGCTGACGATCAGgc                                                                                                                 <  5:232016/149‑1 (MQ=255)                                  aTCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGA‑TAGCTGACGATCAGgcg                                                                                                                >  3:87651/1‑149 (MQ=255)                                     ttAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGA‑TAGCTGATGATCAGGCGCGt                                                                                                             >  5:185634/1‑149 (MQ=255)                                        gcgcAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGA‑TAGCTGa                                                                                                                          >  4:264827/1‑133 (MQ=255)                                        gcgcAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGA‑TAGCTGa                                                                                                                          <  3:264827/133‑1 (MQ=255)                                        gcgcAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGA‑TAGCTGACGATCAGGCGCGTCt                                                                                                           <  1:264217/148‑1 (MQ=255)                                        gcgcAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGA‑TAGCTGACGATCAGGCGCGTCt                                                                                                           >  2:264217/1‑148 (MQ=255)                                         cgcAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGA‑TAGCTGACGATCAGGCGCGTCTgg                                                                                                         <  4:281706/149‑1 (MQ=255)                                          gcAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGc                                                                                                                                     <  2:278416/121‑1 (MQ=255)                                          gcAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGc                                                                                                                                     >  1:278416/1‑121 (MQ=255)                                             aGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGA‑TAGCTGACGATCAGGCGCGTCTGGTc                                                                                                       >  1:6571/1‑147 (MQ=255)                                                      gTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGA‑TAGCTGATGATCAGGCGCGTCTGGTCGAGATCACTGt                                                                                            <  6:185634/149‑1 (MQ=255)                                                       ttGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGA‑TAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGtt                                                                                           <  4:87651/149‑1 (MQ=255)                                                           tgcAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGA‑TAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAg                                                                                       >  1:154064/1‑149 (MQ=255)                                                            gcAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGA‑TAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGc                                                                                      >  2:140810/1‑149 (MQ=255)                                                               ggCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGA‑TAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTgc                                                                                   <  4:113447/149‑1 (MQ=255)                                                                       gtAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGA‑TAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGtt                                                                            <  4:254113/148‑1 (MQ=255)                                                                           gggcgggttcacccgcgaacaccggcgcagccggtgccatgttccgcgttgcctgcttcgcgggtgaacccgcCCCTACAAGGTCAGCGGA‑TAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTcg                                                                       >  2:71349‑M2/74‑149 (MQ=255)                                                                                GGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGA‑TAGCTGACGATCAGGCGCGTCTGGTCGAGATCAGTGTTGAAGCTGCGCCGGTTGGTAGCgttg                                                                  <  4:227231‑M1/149‑1 (MQ=255)                                                                                     acccgcgaacaccggcgcagccggtgccatgttccgcgttgcctgcttcgcgggtgaacccgcCCCTACAAGGTCAGCGGA‑TAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTg                                                                           >  6:280049‑M2/64‑135 (MQ=255)                                                                                     acccgcgaacaccggcgcagccggtgccatgttccgcgttgcctgcttcgcgggtgaacccgcCCCTACAAGGTCAGCGGA‑TAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTg                                                                           <  5:280049‑M2/72‑1 (MQ=255)                                                                                       ccgcgaacaccggcgcagccggtgccatgttccgcgttgcctgcttcgcgggtgaacccgcTCCTACAAGGTCAGCGGA‑TAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGcc                                                           >  5:74846‑M2/62‑149 (MQ=255)                                                                                               cAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGA‑TAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCGGATGTTg                                                   <  1:163352/149‑1 (MQ=255)                                                                                               cAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGA‑TAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCGGATGTTg                                                   <  2:6571/149‑1 (MQ=255)                                                                                               cAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGA‑TAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGCCGCGTTGTTCAGCCGGATGTTg                                                   <  7:49812/149‑1 (MQ=255)                                                                                                aGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGA‑TAGCTGACGATCAGGCGCGTCTGGTCGTGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCGGATGTTGa                                                  <  3:236324/149‑1 (MQ=255)                                                                                                aGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGA‑TAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCGGATGtt                                                    >  4:50129/1‑147 (MQ=255)                                                                                                aGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGA‑TAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCCGTTGGTCGCGTAGTTCAGCCGGATGtt                                                    >  4:236324/1‑147 (MQ=255)                                                                                                 ggCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGA‑TAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCGGATGTTGAg                                                 >  4:77032/1‑149 (MQ=255)                                                                                                    aaCGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGA‑TAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTc                                                                        >  5:183140/1‑123 (MQ=255)                                                                                                    aaCGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGA‑TAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTc                                                                        <  6:183140/123‑1 (MQ=255)                                                                                                        cgGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGA‑TAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCGGATGTTGAGGttcttc                                          <  1:140810/149‑1 (MQ=255)                                                                                                                    ccGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGAGTAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGGGTTGTTCAGCCGGATGTTGAGGTTCTTCAAAGCCCCGct                               >  1:254650/1‑149 (MQ=255)                                                                                                                      ggCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGA‑TAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCGGATGTTGAGGTTCTTAAAAGCCCCGCTCTg                            >  4:104643/1‑149 (MQ=255)                                                                                                                         tGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGA‑TAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCGGATGTTGAGGTTCTTCAAAGCCCCGCTCTgg                           >  6:164485/1‑147 (MQ=255)                                                                                                                         cgttgcctgcttcgcgggtgaacccgcTCCTACAAGGTCAGCGGA‑TAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCGGATGTTGAGGTTCTTCAAAGCCCCGCTCTGGaa                         <  6:74846‑M2/122‑1 (MQ=255)                                                                                                                              cGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGA‑TAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCGGATGTTGAGGTTCTTCAAAGCCCCGCTCTGGAAGgtg                     >  5:97823/1‑148 (MQ=255)                                                                                                                               ggTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGA‑TAGCTGACGATCAGGCGCGTCTGGCCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCGGATGTTGAGGTTCTTCAAAGCCCCGCTCTGGAAGGTGTa                   <  2:154064/149‑1 (MQ=255)                                                                                                                                gtgtTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGA‑TAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCGGATGTTGAGGTTCTTCAAAGCCCCGCTCTGGAAGGTGTAg                  <  3:77032/149‑1 (MQ=255)                                                                                                                                  cttcgcgggtgaacccgcCCCTACAAGGTCAGCGGA‑TAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCTGCCGGATGTTGAGGTTCTTCAAAGCCCCGCTCTGGAAGGTGTAg                  <  1:71349‑M2/129‑1 (MQ=255)                                                                                                                                     cgcgggtgaacccgcCCCTACAAGGTCAGCGGA‑TAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCGGATGTTGAGGTTCTTCAAAGCCCCGCTCTGGAAGGTGTAGTTCAc             >  6:83535‑M2/16‑149 (MQ=255)                                                                                                                                          gtgaacccgcCCCTACAAGGTCAGCGGA‑TAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCGGATGTTGAGGTTCTTCAAAGCCCCGCTCTGGAAGGTGTAGTTCACCTCgg        >  6:125010‑M2/11‑149 (MQ=255)                                                                                                                                            gaacccgcCCCTACAAGGTCAGCGGA‑TAGCTGACGATCAGGCGCGTc                                                                                                            <  4:290276‑M2/39‑1 (MQ=255)                                                                                                                                            gaacccgcCCCTACAAGGTCAGCGGA‑TAGCTGACGATCAGGCGCGTc                                                                                                            >  3:290276‑M2/9‑47 (MQ=255)                                                                                                                                              acccgcCCCTACAAGGTCAGCGGA‑TAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCGGATGTTGAGGTTCTTCAAAGCCCCGCTCTGGAAGGTGTAGTTCACCTCGGCATc    >  6:158051‑M2/7‑149 (MQ=255)                                                                                                                                              acccgcCCATACAAGTTCAGCGGA‑TAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCGGATGTTGAGGTTCTTCAAAGCCCCGCTCTTGAAGGTTTAGTTCACCTCGGCATc    <  2:254650‑M2/143‑1 (MQ=255)                                                                                                                                               cccgcCCCTACAAGGTCAGCGGA‑TAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCGGATGTTGAGGTTCTTCAAAGCCCCGCTCTGGAAGGTGTAGTTCACCTCGGCATcg   >  8:127145‑M2/6‑149 (MQ=255)                                                                                                                                                ccacCCCTACAAGGTCAGCGGA‑TAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCGGATGTTGAGGTTCTTCAAAGCCCCGCTCGGGAAGGTGTAGTTCACCTCGGCATcgc  >  6:285154‑M2/5‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                  TCATCCAGGCGACTTCCAAAGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGA‑TAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCGGATGTTGAGGTTCTTCAAAGCCCCGCTCTGGAAGGTGTAGTTCACCTCGGCATCGC  >  NC_002947/4266455‑4266746

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.