New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4541305	58 (1.080)	4 (0.080)	4/254	NT	6.7%	coding (22/1503 nt)	nhaB	Na(+)/H(+) antiporter NhaB
	?	NC_002947	= 4541332	55 (1.060)					coding (49/1503 nt)	nhaB	Na(+)/H(+) antiporter NhaB

CAATGGCCGTACATGTGCCAAAAACGGGACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGCCTG‑TTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCTCGAATTCATCTTCACCCTGGCCATGGCCCTGAAAT  >  NC_002947/4541185‑4541467                                                                                                                                                    |                                                                                                                                          cAATGGCCGTACATGTGCCAAAAACGGGACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCATGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTc                                                                                                                                          <  3:232401‑M2/149‑2 (MQ=255)   aTGGCCGTACATGTGCCAAAAACGGGACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTcgc                                                                                                                                        >  3:303844‑M2/1‑146 (MQ=255)                  ccAAAAACGGGACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAgg                                                                                                                         <  3:23603/149‑1 (MQ=255)                    aaaaaCGGGACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAggtg                                                                                                                       >  5:61436/1‑149 (MQ=255)                    aaaaaCGGGACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAggtg                                                                                                                       <  3:28291/149‑1 (MQ=255)                     aaaaCGGGACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAggtgg                                                                                                                      <  2:313141/149‑1 (MQ=255)                           ggACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCt                                                                                                               >  6:294260/1‑149 (MQ=255)                            gACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTg                                                                                                              >  6:115274/1‑149 (MQ=255)                             acggtgCGCCTTGCCTAAGACTCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGc                                                                                                             <  8:134360/146‑1 (MQ=255)                               tgtgCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGCTTGTCTGGGCAAGTCGCCGATTTGGTACAAGGTGCTCA‑TCTGCCt                                                                                                           >  4:34656/1‑149 (MQ=255)                                 tgCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCAGCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGCCTG‑t                                                                                                        <  8:229056/149‑1 (MQ=255)                                   cgcCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGCCTG‑ttt                                                                                                      <  3:108654/149‑1 (MQ=255)                                      cTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGCCTG‑TTTTTg                                                                                                   <  5:294260/149‑1 (MQ=255)                                      cTTGCCTAAGACGCGTATATCCGGCACCATGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGCCTG‑TTTTTg                                                                                                   <  4:232401/149‑1 (MQ=255)                                              aGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTgg                                                                                                                                <  4:300824/114‑1 (MQ=255)                                              aGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTgg                                                                                                                                >  3:300824/1‑114 (MQ=255)                                              aGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGCCTG‑TTTTTGGTGCTc                                                                                             <  4:111544/147‑1 (MQ=255)                                              aGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGCCTG‑TTTTTGGTGCTCaa                                                                                           >  2:96231/1‑149 (MQ=255)                                               gACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGCCTG‑TTTTTGGTGCTCAAc                                                                                          >  3:258093/1‑149 (MQ=255)                                                  gcgTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGCCTG‑TTTTTGGTGCTCAACCCg                                                                                       >  6:164184/1‑149 (MQ=255)                                                        atCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑t                                                                                                                 >  2:238755/1‑118 (MQ=255)                                                         tCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGCCTG‑TTTTTGTTGCTCAACCCGCtgttgt                                                                                >  7:248694/1‑149 (MQ=255)                                                         tCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGCCTG‑TTTTTGGTGCTCAACCCGCtgttgt                                                                                <  8:248694/149‑1 (MQ=255)                                                          ccGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGCCTG‑TTTTTGGTGCTCAACCCGCtgttgt                                                                                >  7:171563/1‑148 (MQ=255)                                                          ccGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGCCTG‑TTTTTGGTGCTCAACCCGCtgttgt                                                                                <  8:171563/148‑1 (MQ=255)                                                          ccGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGCCTG‑TTTTTGGTGCTCAACCCGCTgttgtt                                                                               >  3:191852/1‑149 (MQ=255)                                                                            gCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGCCTG‑TTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGt                                                             >  1:304506/1‑149 (MQ=255)                                                                             cTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGCCTG‑TTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGtt                                                            <  4:191852/149‑1 (MQ=255)                                                                              tGAATTATAAGGATACATATTTATGTCCCGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGCCTG‑TTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTg                                                           >  1:17418/1‑149 (MQ=255)                                                                              tGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGCCTG‑TTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTg                                                           >  1:12127/1‑149 (MQ=255)                                                                                   tataAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGCCTG‑TTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGAcc                                                      >  1:269958/1‑149 (MQ=255)                                                                                     taAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGCCTG‑TTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCgg                                                    <  4:258093/149‑1 (MQ=255)                                                                                     taAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGCCTG‑TTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCg                                                     <  5:164184/148‑1 (MQ=255)                                                                                         gATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGCCTG‑TTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTgg                                                <  6:150058/149‑1 (MQ=255)                                                                                          ttacttttttATGTCACGGCCCCTGTCCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGTTTTGGTACAAGGTGGTCA‑TCTGGGTGTTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTgg                                                <  1:259182/142‑1 (MQ=255)                                                                                              atatTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGCCTG‑TTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACt                                           >  3:144758/1‑149 (MQ=255)                                                                                              atatTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGCCTG‑TTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACt                                           >  3:137550/1‑149 (MQ=255)                                                                                               tatTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGCCTG‑TTTTTg                                                                                                   >  1:37922/1‑92 (MQ=255)                                                                                               tatTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGACTG‑TTTTTg                                                                                                   <  2:37922/92‑1 (MQ=255)                                                                                                 tttATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGCCTG‑TTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTgg                                         <  2:304506/148‑1 (MQ=255)                                                                                                        cACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGCCTG‑TTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCTCGaa                                 >  4:105338/1‑149 (MQ=255)                                                                                                         aCGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGCCTG‑TTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGtt                                                            <  5:131492/121‑1 (MQ=255)                                                                                                         aCGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGCCTG‑TTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGtt                                                            >  6:131492/1‑121 (MQ=255)                                                                                                         aCGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGCCTG‑TTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCTCGAAt                                >  7:229614/1‑149 (MQ=255)                                                                                                           gCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGCCTG‑TTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCTCGAATTc                              <  8:229614/149‑1 (MQ=255)                                                                                                             ccccTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGCCTG‑TTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCTCGAATTCAt                            >  8:284427/1‑149 (MQ=255)                                                                                                              cccTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTcgccggtcagggggcgtgacataaatatgtatccttataattcagcgatggcgcacggtgccggatatacgcgtcttaggcaaggcgcacagtcccgttttt                                     >  5:32199‑M2/1‑39 (MQ=255)                                                                                                              cccTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTcgccggtcagggggcgtgacataaatatgtatccttataattcagcgatggcgcacggtgccggatatacgcgtcttaggcaaggcgcacagtcccgttttt                                     <  6:32199‑M2/141‑103 (MQ=255)                                                                                                              cccTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCAGTATGCCTG‑TTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCTCGAATTCAt                            >  1:272072/1‑149 (MQ=255)                                                                                                               ccTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGCCTG‑TTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCTCGAATTCATCt                          >  2:287946/1‑149 (MQ=255)                                                                                                                cTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGCCTG‑TTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCTCg                                   <  6:107177/139‑1 (MQ=255)                                                                                                                cTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGCCTG‑TTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCTCg                                   >  5:107177/1‑139 (MQ=255)                                                                                                                     cGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTcgccggtcagggggcgtgacataaatatgtatccttataattcagcgatggcgcacggtgccggatatacgcgtcttaggcaaggcgcacagtcccgtttttggcacatgtacggc                       <  4:317898‑M2/148‑117 (MQ=255)                                                                                                                            cTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGCCTG‑TTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCGCTGGTGCTCGAATTCATCTTCACCCTGGCCAt             >  1:57235/1‑149 (MQ=255)                                                                                                                               gCCCACGGTTTTCTGGGCAAGTcgccggtcagggggcgtgacataaatatgtatccttataattcagcgatggcgcacggtgccggatatacgcgtcttaggcaaggcgcacagtcccgtttttggcacatgtacggccattgggctgg            >  3:317898‑M2/1‑22 (MQ=255)                                                                                                                                 ccACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGCCTG‑TTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCTCGAATTCATCTTCACCCTGGCCATgg           <  6:178008/146‑1 (MQ=255)                                                                                                                                 ccACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGCCTG‑TTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCTCGAATTCATCTTCACCCTGGCCATgg           >  5:178008/1‑146 (MQ=255)                                                                                                                                 ccACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGCTCA‑TCTCCCTG‑TTTTTCGTCCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTCGGCACTGGTGCTCGAATTCATCTTCACCCTGGCCATGGccc        >  5:286051/1‑149 (MQ=255)                                                                                                                                  cACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGCCTG‑TTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCTCGAATTCATCTTCACCCTGGCCATGGCCCt       >  3:159565/1‑149 (MQ=255)                                                                                                                                     ggTTTTCTGGGCATGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGCCTG‑TTTTTGGTGCTCAACCCGCTGGTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCTCGAATTCATCTTCACCCTGGCCATGGCCCTGaa    <  1:287946/149‑1 (MQ=255)                                                                                                                                       ttttCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGCCTG‑TTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCTCGAATTCATCTTCACCCTGGCCATGGCCCTGAAAt  <  2:269958/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                          CAATGGCCGTACATGTGCCAAAAACGGGACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCA‑TCTGCCTG‑TTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCTCGAATTCATCTTCACCCTGGCCATGGCCCTGAAAT  >  NC_002947/4541185‑4541467

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.