New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4722643	54 (1.000)	3 (0.060)	3/252	NT	5.5%	coding (921/1905 nt)	htpG	chaperone protein HtpG
	?	NC_002947	= 4722713	51 (0.990)					coding (851/1905 nt)	htpG	chaperone protein HtpG

GAATCAACCACACCCTTGATGAAGCGCAGGTACAGCGGCAGGAACGACTCGGCCTGGTCCATGATGAACACACGCTGCACGTACAGCTTCAGGCCGCGCGGCGCTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCTTGTTGTGGCTCCAGGCCAGCGGGTTTTCGAAGTCATGGCCGATGTGCTTGTAGAACTCCTGGTACTCCTCGTCCTTCACTTCGGTGCGCGAACGGGTCCACAGGGCGCTGGCGC  >  NC_002947/4722566‑4722860                                                                                                                                                    |                                                                                                                                                    gAATCAACCACACCCTTGATGAAGCGCAGGTACAGCGGCAGGAACGACTCGGCCTGGTCCATGATGAACACACGCTGCACGTACAGCTTCAGGCCGCGCGGCGCTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAg                                                                                                                                                    <  5:156014‑M2/149‑2 (MQ=255)  aaTCAACCACACCCTTGATGAAGCGCAGGTACAGCGGCAGGAACGACTCGGCCTGGTCCATGATGAACACACGCTGCACGTACAGCTTCAGGCCGCGCGGCGCTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAgc                                                                                                                                                   >  6:45852‑M2/1‑147 (MQ=255)          acacCCTTGATGAAGCGCAGGTACAGCGGCAGGAACGACTCGGCCTGGTCCATGATGAACACACGCTGCACGTACAGCTTCAGGCCGCGCGGCGCTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGtt                                                                                                                                           <  2:288215/149‑1 (MQ=255)              ccTTGATGAAGCGCAGGTACAGCGGCAGGAACGACTCGGCCTGGTCCATGATGAACACACGCTGCACGTACAGCTTCAGGCCGCGCGGCGCTTCGCGCTGGTACAGGTCGAACGGCGCCCGGGCCGGCACGTACAGCAGAGAGTTGTAt                                                                                                                                       >  4:189381/1‑149 (MQ=255)              ccTTGATGAAGCGCAGGTACAGCGGCAGGAACGACTCGGCCTGGTCCATGATGAACACACGCTGCACGTACAGCTTCAGGCCGCGCGGCGCTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTAt                                                                                                                                       >  2:168831/1‑149 (MQ=255)               cTTGATGAAGCGCAGGTACAGCGGCAGGAACGACTCGGCCTGGTCCATGATGAACACACGCTGCACGTACAGCTTCAGGCCGCGCGGCGCTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTAtt                                                                                                                                      <  7:241314/149‑1 (MQ=255)                        gcgcAGGTACAGCGGCAGGAACGACTCGGCCTGGTCCATGATGAACACACGCTGCACGTACAGCTTCAGGCCGCGCGGCGCTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGc                                                                                                                             >  3:228837/1‑149 (MQ=255)                          gcAGGTACAGCGGCAGGAACGACTCGGCCTGGTCCATGATGAACACACGCTGCACGTACAGCTTCAGGCCGCGCGGCGCTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCt                                                                                                                           >  3:134446/1‑149 (MQ=255)                          gcAGGTACAGCGGCAGGAACGACTCGGCCTGGTCCATGATGAACACACGCTGCACGTACAGCTTCAGGCCGCGCGGCGCTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCt                                                                                                                           >  2:60415/1‑149 (MQ=255)                              gTACAGCGGCAGGAACGACTCGGCCTGGTCCATGATGAACACACGCTGCACGTACAGCTTCAGGCCGCGCGGCGCTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGa                                                                                                                       >  4:313508/1‑149 (MQ=255)                                  aGCGGCAGGAACGACTCGGCCTGGTCCATGATGAACACACGCTGCACGTACAGCTTCAGGCCGCGCGGCGCTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCtt                                                                                                                   <  4:228837/149‑1 (MQ=255)                                       cAGGAACGACTCGGCCTGGTCCATGATGAACACACGCTGCACGTACAGCTTCAGGCCGCGCGGCGCTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCTtgttgt                                                                                                              <  2:194152/149‑1 (MQ=255)                                       cAGGAACGACTCGGCCTGGTCCATGATGAACACACGCTGCACGTACAGCTTCAGGCCGCGCGGCGCTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCTtgttgt                                                                                                              >  4:41646/1‑149 (MQ=255)                                       cAGGAACGACTCGGCCTGGTCCATGATGAACACACGCTGCACGTACAGCTTCAGGCCGCGCGGCGCTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCTtgttgt                                                                                                              <  1:60415/149‑1 (MQ=255)                                         ggAACGACTCGGCCTGGTCCATGATGAACACACGCTGCACGTACAGCTTCAGGCCGCGCGGCGCTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCttg                                                                                                                  <  2:297927/143‑1 (MQ=255)                                         ggAACGACTCGGCCTGGTCCATGATGAACACACGCTGCACGTACAGCTTCAGGCCGCGCGGCGCTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCttg                                                                                                                  >  1:297927/1‑143 (MQ=255)                                                cTCGGCCTGGTCCATGATGAACACACGCTGCACGTACAGCTTCAGGCCGCGCGGCGCTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCTTGTTGTGGCTCCAgg                                                                                                     >  3:84831/1‑149 (MQ=255)                                                   ggCCTGGTCCATGATGAACACACGCTGCACGTACAGCTTCAGGCCGCGCGGCGCTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCTTGTTGTGGCTCCAGGc                                                                                                    >  6:218702/1‑147 (MQ=255)                                                   ggCCTGGTCCATGATGAACACACGCTACACGTACAGCTTCAGGCCGCGCGGCGCTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCTTGTTGTGGCTCCAGGc                                                                                                    <  6:281757/147‑1 (MQ=255)                                                       tGGTCCATGATGAACACACGCTGCACGTACAGCTTCAGGCCGCGCGGCGCTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCTTGTTGTGGCTCCAGGCCAGCgg                                                                                              >  4:76345/1‑149 (MQ=255)                                                            cATGATGAACACACGCTGCACGTACAGCTTCAGGCCGCGCGGCGCTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCTTGTTGTGGCTCCAGGCCAGCGGGtttt                                                                                         <  5:218702/149‑1 (MQ=255)                                                            cATGATGAACACACGCTGCACGTACAGCTTCAGGCCGCGCGGCGCTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCTTGTTGTGGCTCCAGGCCAGCGGGtttt                                                                                         <  4:134446/149‑1 (MQ=255)                                                                atgaACACACGCTGCACGTACAGCTTCAGGCCGCGCGGCGCTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCTTGTTGTGGCTCCAGGCCAGCGGGTTTTCg                                                                                       >  3:57991/1‑147 (MQ=255)                                                                 tgaACACACGCTGCACGTACAGCTTCAGGCCGCGCGGCGCTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCTTGTTGTGGCTCCAGGCCAGCGGGTTTTCg                                                                                       >  4:8793/1‑146 (MQ=255)                                                                 tgaACACACGCTGCACGTACAGCTTCAGGCCGCGCGGCGCTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCTTGTTGTGGCTCCAGGCCAGCGGGTTTTCGaa                                                                                     <  3:313508/148‑1 (MQ=255)                                                                 tgaACACACGCTGCACGTACAGCTTCAGGCCGCGCGGCGCTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCTTGTTGTGGCTCCAGGCCAGCGGGTTTTCGaa                                                                                     <  3:8793/148‑1 (MQ=255)                                                                   aaCACACGCTGCACGTACAGCTTCAGGCCGCGCGGCGCTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCTTGTTGTGGCTCCAGGCCAGCGGGTTTTCGAAGt                                                                                   >  6:259638/1‑148 (MQ=255)                                                                    acacacGCTGCACGTACAGCTTCAGGCCGCGCGGCGCTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAgcagcgtgtgttcatcatggaccaggccgagtcgttcctgccgctgtacctgcgcttcatcaagggtg                                                                                 <  1:294164‑M2/149‑69 (MQ=255)                                                                       cacGCTGCACGTACAGCTTCAGGCCGCGCGGCGCTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCTTGTTGTGGCTCCAGGCCAGCGGGTTTTCGAAGTCATgg                                                                              <  5:259638/149‑1 (MQ=255)                                                                        acGCTGCACGTACAGCTTCAGGCCGCGCGGCGCTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTa                                                                                                                                        <  3:253887/90‑1 (MQ=255)                                                                        acGCTGCACGTACAGCTTCAGGCCGCGCGGCGCTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTa                                                                                                                                        >  4:253887/1‑90 (MQ=255)                                                                          gCTGCACGTACAGCTTCAGGCCGCGCGGCGCTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAgcagcgtgtgttcatcatggaccaggccgagtcgttcctgccgctgtacctgcgcttcatcaagggtgtggtt                                                                            <  3:261133‑M2/148‑74 (MQ=255)                                                                             gCACGTACAGCTTCAGGCCGCGCGGCGCTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCTTGTTGTGGCTCCAGGCCAGCGGGTTTTCGAAGTCATGGCCGAtg                                                                        <  3:308266/149‑1 (MQ=255)                                                                                 gTACAGCTTCAGGCCGCGCGGCGCTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCTTGTTGTGGCTCCAGGCCAGCGGGTTTTCGAAGTCATGGCCGATGTGCt                                                                    >  2:72831/1‑149 (MQ=255)                                                                                 gTACAGCTTCAGGCCGCGCGGCGCTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCTTGTTGTGGCTCCAGGCCAGCGGGTTTTCGAAGTCATGGCCGATGTGCt                                                                    >  2:67986/1‑149 (MQ=255)                                                                                  tACAGCTTCAGGCCGCGCGGCGCTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCTTGTTGTGGCTCCAGGCCAGCGGGTTTTCGAAGTCATGGCCGATGTGCtt                                                                   >  2:290990/1‑149 (MQ=255)                                                                                    cAGCTTCAGGCCGCGCGGCGCTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCTTGTTGTGGCTCCAGGCCAGCGGGTTTTCGAAGTCATGGCCGATGTGCTTg                                                                  >  4:262786/1‑148 (MQ=255)                                                                                        ttCAGGCCGCGCGGCGCTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCTTGTTGTGGCTCCAGGCCAGCGGGTTTTCGAAGTCATGGCCGATGTGCTTGTAGaa                                                             >  5:64096/1‑149 (MQ=255)                                                                                            ggCCGCGCGGCGCTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCTTGTTGTGGCTCCAGGCCAGCGGGTTTTCGAAGTCATGGCCGATGTGCTTGTAGAACTcc                                                         <  7:192119/149‑1 (MQ=255)                                                                                                 cgcgGCGCTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCTTGTTGTGGCTCCAGGCCAGCGGGTTTTCGAAGTCATGGCCGATGTGCTTGTAGAACTCCTGGTa                                                    <  1:290990/149‑1 (MQ=255)                                                                                                     gcgcTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGTCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCTTGTTGTGGCTCCAGGCCAGCGGGTTTTCGAAGTCATGGCCGATGTGCTTGTAGAACTCCTGGTActcc                                                <  6:115681/149‑1 (MQ=255)                                                                                                     gcgcTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAgcagcgtgtgttcatcatggaccaggccgagtcgttcctgccgctgtacctgcgcttcatcaagggtgtggttgattccaatgacctgtcgctgaacgtgt                                                >  2:294164‑M2/1‑48 (MQ=255)                                                                                                       gcTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCTTGTTGTGGCTCCAGGCCAGCGGGTTTTCGAAGTCATGGCCGATGTGCTTGTAGAACTCCTGGTActcctc                                              <  3:262786/149‑1 (MQ=255)                                                                                                       gcTTCGCGCTGGTAAAGGTCGAACGGCGCACGGGCCGGCAAGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCTTGTTGTGCCTCCAGGCCAGCGGGTTTTCGAAGTCATGGCCGATGTGCTTGTAGAACTCCTGGTActcctc                                              <  3:189381/149‑1 (MQ=255)                                                                                                         ttCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCTTGTTGTGGCTCCAGGCCAGCGGGTTTTCGAAGTCATGGCCGATGTGCTTGTAGAACTCCTGGTACTCCTCGt                                            <  3:41646/149‑1 (MQ=255)                                                                                                                tGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCTTGTTGTGGCTCCAGGCCAGCGGGTTTTCGAAGTCATGGCCGATGTGCTTGTAGAACTCCTGGTACTCCTCGTCCTTCAc                                     >  4:50689/1‑149 (MQ=255)                                                                                                                 ggTACAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCTTGTTGTGGCTCCAGGCCAGCGGGTTTTCGAAGTCATGGCCGATGTGCTTGTAGAACTCCTGGTACTCCTCGTCCTTCACt                                    >  6:201789/1‑149 (MQ=255)                                                                                                                  tgaCAGGGCGAACGGCGCACGGGCCGGCACGTAAACCACCGTTTTTTATTCGAGCTTGCCTTCGACCTTGTTGTGGCTCCAGGCCAGCGGGTTTTCGAAGTCATGGCCGATGTGCTTGTAGAACTCCTGGTACTCCTCGTCCTTCACtt                                   <  7:206740/147‑1 (MQ=255)                                                                                                                    aCAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCTTGTTGTGGCTCCAGGCCAGCGGGTTTTCGAAGTCATGGCCGATGTGCTTGTAGAACTCCTGGTACTCCTCGTCCTTCACTTCg                                 >  4:124867/1‑149 (MQ=255)                                                                                                                     cAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCTTGTTGTGGCTCCAGGCCAGCGGGTTTTCGAAGTCATGGCCGATGTGCTTGTAGAACTCCTGGTACTCCTCGTCCTTCACTTCg                                 <  1:168831/148‑1 (MQ=255)                                                                                                                        gTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCTTGTTGTGGCTCCAGGCCAGCGGGTTTTCGAAGTCATGGCCGATGTGCTTGTAGAACTCCTGGTACTCCTCGTCCTTCACTTCGGTgc                             >  5:151317/1‑149 (MQ=255)                                                                                                                                gcgcACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCTTGTTGTGGCTCCAGGCCAGCGGGTTTTCGAAGTCATGGCCGATGTGCTTGTAGAACTCCTGGTACTCCTCGTCCTTCACTTCGGTGCGCGAACgg                     >  8:277189/1‑149 (MQ=255)                                                                                                                                 cgcACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCTTGTTGTGGCTCCAGGCCAGCGGGTTTTCGAAGTCATGGCCGATGTGCTTGTAGAACTCCTGGTACTCCTCGTCCTTCACTTCGGTGCGCGAACggg                    <  5:201789/149‑1 (MQ=255)                                                                                                                                  gcACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCTTGTTGTGGCTCCAGGCCAGCGGGTTTTCGAAGTCATGGCCGATGTGCTTGTAGAACTCCTGGTACTCCTCGTCCTTCACTTCGGTGCGCGAACGGGt                   >  3:279779/1‑149 (MQ=255)                                                                                                                                   cACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCTTGTTGTGGCTCCAGGCCAGCGGGTTTTCGAAGTCATGGCCGATGTGCTTGTAGAACTCCTGGTACTCCTCGTCCTTCACTTCGGTGCGCGAACGGGTc                  <  6:156014/149‑1 (MQ=255)                                                                                                                                    aCGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCTTGTTGTGGCTCCAGGCCAGCGGGTTTTCGAAGTCATGGCCGATGTGCTTGTAGAACTCCTGGTACTCCTCGTCCTTCACTTCGGTGCGCGAACGGGTcc                 <  1:72831/149‑1 (MQ=255)                                                                                                                                    aCGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCTTGTTGTGGCTCCAGGCCAGCGGGTTTTCGAAGTCATGGCCGATGTGCTTGTAGAACTCCTGGTACTCCTCGTCCTTCACTTCGGTGCGCGAACGGGTcc                 <  1:67986/149‑1 (MQ=255)                                                                                                                                                   cagcagCGAGTTGTATTCGAGCTTGCCTTCGACCTTGTTGTGGCTCCAGGCCAGCGGGTTTTCGAAGTCATGGCCGATGTGCTTGTAGAACTCCTGGTACTCCTCGTCCTTCACTTCGGTGCGCGAACGGGTCCACAGGGCGCTGgcgc  <  4:57991/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                    GAATCAACCACACCCTTGATGAAGCGCAGGTACAGCGGCAGGAACGACTCGGCCTGGTCCATGATGAACACACGCTGCACGTACAGCTTCAGGCCGCGCGGCGCTTCGCGCTGGTACAGGTCGAACGGCGCACGGGCCGGCACGTACAGCAGCGAGTTGTATTCGAGCTTGCCTTCGACCTTGTTGTGGCTCCAGGCCAGCGGGTTTTCGAAGTCATGGCCGATGTGCTTGTAGAACTCCTGGTACTCCTCGTCCTTCACTTCGGTGCGCGAACGGGTCCACAGGGCGCTGGCGC  >  NC_002947/4722566‑4722860

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.