New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5258313 =70 (1.300)4 (0.080) 4/248 NT 5.9% coding (844/1212 nt) PP_4635 trans‑2‑enoyl‑CoA reductase
?NC_002947 5258382 = 62 (1.230)coding (775/1212 nt) PP_4635 trans‑2‑enoyl‑CoA reductase

GGGTGCCTTCGTGAACACCTTTCTCCTGCATGATCTTGAAGACCATCGACAGGTACAGTGGCATCACCGGGATGGCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATCGGCCAGGTGATATCGCTGCCGATATAGCTGAAGGCCACGGTGCGAGCGCCTTCGGCCAGTACATTGGCGCCAGCC  >  NC_002947/5258235‑5258527
                                                                                                                                                    |                                                                                                                                                 
cctggccgatctactggcacggtgcactgggccaggccaagcaggacctggacgaaaccgccctgcgtctgaaccagaAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTc                                                                                                                                                  >  3:96694‑M1/79‑149 (MQ=255)
 ggTGCCTTCGTGAACACCTTTCTCCTGCATGATCTTGAAGACCATCGACAGGTACAGTGGCATCACCGGGATGGCCGAGCTGGCCTGGGTAGCCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTc                                                                                                                                                  <  5:163073/148‑1 (MQ=255)
 ggTGCCTTCGTGAACACCTTTCTCCTGCATGATCTTGAAGACCATCGACAGGTACAGTGGCATCACCGGGATGGCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCt                                                                                                                                                 >  6:102812/1‑149 (MQ=255)
   tGCCTTCGTGAACACCTTTCTCCTGCATGATCTTGAAGACCATCGACAGGTACAGTGGCATCACCGGGATGGCTGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCAGATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTgg                                                                                                                                               <  1:122430/149‑1 (MQ=255)
    gccgatctactggcacggtgcactgggccaggccaagcaggacctggacgaaaccgccctgcgtctgaaccagaAGCTGGCCTGGGTAACCACCGACTTGACCACCGCCGCATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTg                                                                                                                                                >  1:240016‑M1/75‑147 (MQ=255)
          gTGAACACCTTTCTCCTGCATGATCTTGAAGACCATCGACAGGTACAGTGGCATCACCGGGATGGCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGa                                                                                                                                         <  5:102812/148‑1 (MQ=255)
           tGAACACCTTTCTCCTGCATGATCTTGAAGACCATCGACAGGTACAGTGGCATCACCGGGATGGCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGAc                                                                                                                                        <  1:249910/149‑1 (MQ=255)
           tGAACACCTTTCTCCTGCATGATCTTGAAGACCATCGACAGGTACAGTGGCATCACCGGGATGGCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACg                                                                                                                                       >  2:224436/1‑149 (MQ=255)
            gAACACCTTTCTCCTGCATGATCTTGAAGACCATCGACAGGTACAGTGGCATCACCGGGATGGCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTg                                                                                                                                                >  3:220892/1‑139 (MQ=255)
            gAACACCTTTCTCCTGCATGATCTTGAAGACCATCGACAGGTACAGTGGCATCACCGGGATGGCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTg                                                                                                                                                <  4:220892/139‑1 (MQ=255)
             aaCACCTTTCTCCTGCATGATCTTGAAGACCATCGACAGGTACAGTGGCATCACCGGGATGGCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACg                                                                                                                                       >  3:231217/1‑147 (MQ=255)
                acCTTTCTCCTGCATGATCTTGAAGACCATCGACAGGTACAGTGGCATCACCGGGATGGCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAggg                                                                                                                                  >  7:257668/1‑149 (MQ=255)
                  cTTTCTCCTGCATGATCTTGAAGACCATCGACAGGTACAGTGGCATCACCGGGATGGCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCg                                                                                                                                >  3:164566/1‑149 (MQ=255)
                  cTTTCTCCTGCATGATCTTGAAGACCATCGACAGGTACAGTGGCATCACCGGGATGGCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCg                                                                                                                                <  5:320030/149‑1 (MQ=255)
                  cTTTCTCCTGCATGATCTTGAAGACCATCGACAGGTACAGTGGCATCACCGGGATGGCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCg                                                                                                                                >  2:125186/1‑149 (MQ=255)
                  cTTTCTCCTGCATGATCTTGAAGACCATCGACAGGTACAGTGGCATCACCGGGATGGCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCg                                                                                                                                >  1:164195/1‑149 (MQ=255)
                       tcCTGCATGATCTTGAAGACCATCGACAGGTACAGTGGCATCACCGGGATGGCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTc                                                                                                                           >  3:155962/1‑149 (MQ=255)
                         cTGCATGATCTTGAAGACCATCGACAGGTACAGTGGCATCACCGGGATGGCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGt                                                                                                                              >  7:25434/1‑144 (MQ=255)
                         cTGCATGATCTTGAAGACCATCGACAGGTACAGTGGCATCACCGGGATGGCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGt                                                                                                                              <  8:25434/144‑1 (MQ=255)
                         cTGCATGATCTTGAAGACCATCGACAGGTACAGTGGCATCACCGGGATGGCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTc                                                                                                                           <  5:280473/147‑1 (MQ=255)
                         cTGCATGATCTTGAAGACCATCGACAGGTACAGTGGCATCACCGGGATGGCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTc                                                                                                                           <  1:224436/147‑1 (MQ=255)
                             aTGATCTTGAAGACGATCGACAGGTACAGTGTCATCACCGGGATGGCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAg                                                                                                                     <  8:257668/149‑1 (MQ=255)
                                        gACCATCGACAGGTACAGTGGCATCACCGGGATGGCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTtgg                                                                                                          <  4:133735/149‑1 (MQ=255)
                                           cATCGACAGGTACAGTGGCATCACCGGGATGGACGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTtggcct                                                                                                       >  4:255616/1‑149 (MQ=255)
                                               gACAGGTACAGTGGCATCACCGGGATGCCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTtggcctggc                                                                                                    <  8:216343/148‑1 (MQ=255)
                                                aCAGGTACAGTGGCATCACCGGGATGGCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTtggcctggcc                                                                                                   >  3:154548/1‑148 (MQ=255)
                                                 cAGGTACAGTGGCATCACCGGGAGGGCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCa                                                                                                 <  6:249551/149‑1 (MQ=255)
                                                  aGGTACAGTGGCATCACCGGGATGGCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGCCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAg                                                                                                >  2:277933/1‑149 (MQ=255)
                                                   ggTACAGTGGCATCACCGGGATGGCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGTGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGt                                                                                               <  8:306976/149‑1 (MQ=255)
                                                     tACAGTGGCATCACCGGGATGGCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGtt                                                                                                                             <  4:33159/117‑1 (MQ=255)
                                                     tACAGTGGCATCACCGGGATGGCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGtt                                                                                                                             >  3:33159/1‑117 (MQ=255)
                                                         gTGGCATCACCGGGATGGCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCg                                                                                         >  8:87515/1‑149 (MQ=255)
                                                             cATCACCGGGATGGCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTc                                                                                                                  <  2:150613/120‑1 (MQ=255)
                                                             cATCACCGGGATGGCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTc                                                                                                                  >  1:150613/1‑120 (MQ=255)
                                                             cATCACCGGGATGGCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGcc                                                                                     <  1:125186/149‑1 (MQ=255)
                                                             cATCACCGGGATGGCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTCGCCTGGCCCAGTGCACCGTGc                                                                                      >  4:178224/1‑148 (MQ=255)
                                                              aTCACCGGGATGGCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGtt                                                                                                                             <  7:214738/108‑1 (MQ=255)
                                                              aTCACCGGGATGGCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGtt                                                                                                                             >  8:214738/1‑108 (MQ=255)
                                                               tCACCGGGATGGCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTtggc                                                                                                         <  1:113012/127‑1 (MQ=255)
                                                               tCACCGGGATGGCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTtggc                                                                                                         >  2:113012/1‑127 (MQ=255)
                                                                 aCCGGGATGGCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAg                                                                                   >  3:179858/1‑147 (MQ=255)
                                                                  ccGGGATGGCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAg                                                                                <  1:168566/149‑1 (MQ=255)
                                                                   cGGGATGGCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAg                                                                                >  3:233725/1‑148 (MQ=255)
                                                                     ggATGGCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAg                                                                                   >  5:299571/1‑143 (MQ=255)
                                                                     ggATGGCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATc                                                                             <  7:202207/149‑1 (MQ=255)
                                                                      gATGGCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGAACg                                                                            <  4:231217/149‑1 (MQ=255)
                                                                         ggCCGAGATGGCCTGGGTAACCACAGACTTGAGCACCGCCACATTGTCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATCGGc                                                                          <  4:233725/148‑1 (MQ=255)
                                                                           cagaagctggccggtgaagtgaaaggcggcgccaatgcggcggtggtcaagtcggtggttacccaggccagctTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATCGGc                                                                          >  1:240016‑M2/74‑147 (MQ=255)
                                                                             gaagctggccggtgaagtgaaaggcggcgccaatgtggcggtgctcaagtcggtggttacccaggccagctTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATCGGCCAgg                                                                      >  3:96694‑M2/72‑149 (MQ=255)
                                                                             gAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATCGGCCAGGt                                                                     >  7:5438/1‑149 (MQ=255)
                                                                                  tggccggtgaagtgaaaggcggcgccaatgtggcggtgctcaagtcggtggttacccaggccagctTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGTCCAGTGCACCGTGCCAGTAGATCGGCCAGGTGata                                                                 >  4:281358‑M2/67‑149 (MQ=255)
                                                                                    CCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATCGGCCAGGTGATATCg                                                              <  1:168044‑M1/149‑1 (MQ=255)
                                                                                          tAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATCGGCCAGGTGATATCGCTGCCg                                                        <  6:299571/149‑1 (MQ=255)
                                                                                              caccGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATCGGCCAGGTGATATCGCTGCCGata                                                     >  4:229280/1‑148 (MQ=255)
                                                                                                ccGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATCGGCCAGGTGATATCGCTGCCGATATAg                                                  >  4:72435/1‑149 (MQ=255)
                                                                                                ccGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGCGCCAGTAGATCGGCCGGGTGATATCGCTGCCGATATAg                                                  <  4:155962/149‑1 (MQ=255)
                                                                                                       gAGCACCGCCACATTGGCGCCGCCTTTCACTTCGCCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATCGGCCAGGTGATATCGCTGCCGATATAGCTGaa                                             <  1:203244/147‑1 (MQ=255)
                                                                                                        aGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATCGGCCAGGTGATATCGCTGCCGATATAg                                                  >  2:52756/1‑141 (MQ=255)
                                                                                                        aGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATCGGCCAGGTGATATCGCTGCCGATATAg                                                  <  1:52756/141‑1 (MQ=255)
                                                                                                        aGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATCGGCCAGGTGATATCGCTGCCGATATAGCTGAAGGc                                          <  4:164566/149‑1 (MQ=255)
                                                                                                         gCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACGGTGCCAGTAGATCGGCCAGGTGATATCGCTGCCGATATAGCTGaa                                             <  1:238954/145‑1 (MQ=255)
                                                                                                         gCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATCGGCCAGGTGATATCGCTGCCGATATAGCTGaa                                             >  2:238954/1‑145 (MQ=255)
                                                                                                         gCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATCGGCCAGGTGATATCGCTGCCGATATAGCTGAAGGc                                          >  5:175187/1‑148 (MQ=255)
                                                                                                             cGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCa                                                                                    <  5:244591/102‑1 (MQ=255)
                                                                                                             cGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCa                                                                                    >  6:244591/1‑102 (MQ=255)
                                                                                                                ccACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATCGGCCAGGTGATATCGCTGCCGATATAGCTGAAGGCCACGGTg                                   <  3:229280/149‑1 (MQ=255)
                                                                                                                 cacaTTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATCGGCCAGGTGATATCGCTGCCGATATAGCTGAAGGCCACGGTGc                                  >  3:87992/1‑149 (MQ=255)
                                                                                                                 cacaTTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGGTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATCGGCCAGGTGATATCGCTGCCGATATAGCTGAAGGCCACGGTGc                                  <  6:82457/149‑1 (MQ=255)
                                                                                                                  acaTTGGCGCCGCCTTTCACTTCACCTCCCAGCTTCTGGTTCAGACGCAGGGCTGTTTCGTCCAGGTCCTGCTTGGCATGGCCCAGTGCACCGTGCCAGTAGATCGGCCAGGTGATATATCTGCCGATATAGCTGAAGGACACGGtcc                                  >  4:117253/1‑146 (MQ=255)
                                                                                                                           ccgccTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATCGGCCAGGTGATATCGCTGCCGTTATAGCTGAAGGCCACGGTGCGAGCGCCTTc                        <  3:255616/149‑1 (MQ=255)
                                                                                                                           ccgccTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGAGCGGCCAGGTGATATCGCTGCCGATATAGCTGAAGGCCACGGTGCGAGCGCCTTc                        <  2:164195/149‑1 (MQ=255)
                                                                                                                             gtcggtggttacccaggccagctTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATCGGCCAGGTGATATCGCTGCCGATATAGCTGAAGGCCACGGTGCGAGCGCCTTCgg                      <  4:96694‑M2/126‑1 (MQ=255)
                                                                                                                              ccTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATCGGCCAGGTGATATCGCTGCCGATATAGCTGAAGGCCACGGTGCGAGCGCCTTCGGc                     <  4:179858/149‑1 (MQ=255)
                                                                                                                                   cacttcacCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATCGGCCAGGTGATATCGCTGCCGATATAGCTGAAGGCCACGGTGCGAGCGCCTTCGGCCAGt                 <  7:87515/148‑1 (MQ=255)
                                                                                                                                        cccaggccagctTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATCGGCCAGGTGATATCGCTGCCGATATAGCTGAAGGCCACGGTGCGAGCGCCTTCGGCCAGTACATTg           <  2:240016‑M2/137‑1 (MQ=255)
                                                                                                                                        cacCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATCGGCCAGGTGATATc                                                               >  4:274960/1‑97 (MQ=255)
                                                                                                                                        cacCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATCGGCCAGGTGATATc                                                               <  3:274960/97‑1 (MQ=255)
                                                                                                                                        cacCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATCGGCCAGGTGATATCGCTGCCGATATAGCTGAAGGCCACGGTGCGAGCGCCTTCGGCCAGTACAtt            <  4:154548/148‑1 (MQ=255)
                                                                                                                                          ccGGCCTGCTTCTGCTTCAGTCGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATCGGCCAGGTGATATCGCTGCCGATATAGCTGAAGGCCACGGTGCGAGCGCCTTCGGCCAGTACATTGgc         <  4:50404/149‑1 (MQ=255)
                                                                                                                                           cGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATCGGCCAGGTGATATCGCTGCCGATATAGCTGAAGGCCACGGTGCGAGCGCCTTCGGCCAGTACATTGgcg        >  2:94547/1‑149 (MQ=255)
                                                                                                                                             gccagctTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATCGGCCAGGTGATATCGCTGCCGATATAGCTGAAGGCCACGGTGCGAGCGCCTTCGGCCAGTACATTGgcgc       >  7:224888‑M2/8‑148 (MQ=255)
                                                                                                                                              ccagctTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATCGGCCAGGTGATATCGCTGCCGATATAGCTGAAGGCCACGGTGCGAGCGCCTTCGGCCAGTACATTGgcgc       >  5:265627‑M2/7‑147 (MQ=255)
                                                                                                                                                 gctTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATCGGCCAGGTGATATCGCTGCCGATATAGCTTAAGGCCACGGTGCGAGCGCCTTCGGCCAGTACATTGGCgccagcc  <  3:178224‑M2/146‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                 
GGGTGCCTTCGTGAACACCTTTCTCCTGCATGATCTTGAAGACCATCGACAGGTACAGTGGCATCACCGGGATGGCCGAGCTGGCCTGGGTAACCACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATCGGCCAGGTGATATCGCTGCCGATATAGCTGAAGGCCACGGTGCGAGCGCCTTCGGCCAGTACATTGGCGCCAGCC  >  NC_002947/5258235‑5258527

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.