| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,356,815 | A→C | 7.5% | V649G (GTT→GGT) | infB ← | translation initiation factor IF‑2 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,356,815 | 0 | A | C | 7.5% | 215.4 / 5.1 | 74 | V649G (GTT→GGT) | infB | translation initiation factor IF‑2 |
| Reads supporting (aligned to +/- strand): ref base A (36/32); new base C (2/4); total (38/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.24e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TGCATTCGAAGCCAGCGCCAGGTTGGCATCGCTCTCGGTGATACCACCGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATACTTGCCTTGACGGAACAGGGCAACTTCACGGGCTTTCTTCTCGTCGGCAACCAC > NC_002947/5356667‑5356963 | tGCATTCGAAGCCAGCGCCAGGTTGGCATCGCTCTCGGTGATACCACCGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGaa > 7:306770/1‑149 (MQ=255) cATTCGAAGCCAGCGCCAGGTTGGCATCTCTCTCGGTGATACCACCGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACTCACATCGGTCTTGAGaa < 8:306770/147‑1 (MQ=255) aTTCGAAGCCAGCGCCAGGTTGGCATCGCTCTCGGTGATACCACCGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGa > 4:268490/1‑149 (MQ=255) ttCGAAGCCAGCGCCAGGTTGGCATCGCTCTCGGTGATACCACCGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGAt > 4:199015/1‑149 (MQ=255) ttCGAAGCCAGCGCCAGGTTGGCATCGCTCTCGGTGATACCACCGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGAt > 3:155733/1‑149 (MQ=255) ttCGAAGCCAGCGCCAGGTTGGCATCGCTCTCGGTGATACCACCGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGCTCGTGAGACCGAt > 8:303724/1‑149 (MQ=255) gAAGCCAGCGCCAGGTTGGCATCGCTCTCGGTGATACCACCGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGTTCTCAAGACCGATGt < 7:233530/148‑1 (MQ=255) gAAGCCAGCGCCAGGTTGGCATCGCTCTCGGTGATACCACCGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGtt > 6:337220/1‑149 (MQ=255) aGCCAGCGCCAGGTTGGCATCGCTCTCGGTGATACCACCGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGTTCTCAAGACCGATGtgcg < 7:24148/149‑4 (MQ=255) aGCCAGCGCCAGGTTGGCATCGCTCTCGGTGATACCACCGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGa < 7:258922/149‑1 (MQ=255) aGCGCCAGGTTGGCATCGCTCTCGGTGATACCACCGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGt > 5:281987/1‑149 (MQ=255) gcgcCAGGTTGGCATCGCTCTCGGTGATACCTCCGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGtt > 4:107114/1‑149 (MQ=255) cAGGTTGGCATCGCTCTCGGTGATACAACCGACGCAACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATAGGTCTTGAGAACGATGTTGAGGGGTttct > 7:147455/1‑149 (MQ=255) gCATCGCTCTCGGTGATACCACCGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTtcttctcttc < 2:277972/149‑1 (MQ=255) cATCGCTCTCGGTGATACCACCGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTCAGAACGATGTTGAGGGTTTTCTTCTCTTcc < 1:31744/149‑1 (MQ=255) aTCGCTCTCGGTGATACCACCGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCt > 5:11596/1‑149 (MQ=255) gCTCTCGGTGATACCACCGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGAc < 6:281987/149‑1 (MQ=255) tctcGGTGATACCACCGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGAcc > 4:3062/1‑148 (MQ=255) ggTGATACCACCGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATg < 3:271138/148‑1 (MQ=255) ccaccGATGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTAGAGAACGATGTTGAGGGTTTTCTTCTCTTCGTGACCCATGGTCTCg > 6:266871/1‑147 (MQ=255) ccaccGACGCCAACACCAATCAGGCGCACTTGCACTTCGTCGTTGGCCAGGCCTCCGAGCGAACCCTGCAGCGCTTCAAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCTaa < 2:59681/149‑1 (MQ=255) caccGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCg > 5:57212/1‑146 (MQ=255) caccGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACAGCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCg > 2:299538/1‑146 (MQ=255) ccGACGCCACCACGAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGAt < 3:268490/149‑1 (MQ=255) ccaccaccaATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCTGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTc < 3:107114/149‑1 (MQ=255) caccaccaATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTATTCCTGACCCAAGTTCTCGAAGATGTTTTc > 1:219335/1‑148 (MQ=255) accaATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCt > 7:170957/1‑149 (MQ=255) accaATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTAGAGAACGATGTTGAGGGTTTTCTTCTCTTCGTGACCCATGGTCTCGAAGATGTTTTCCAGCt < 5:266871/149‑1 (MQ=255) ccaATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCtt < 7:303724/149‑1 (MQ=255) caATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTg > 3:72707/1‑149 (MQ=255) caATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTg > 6:58699/1‑149 (MQ=255) aCGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTc < 6:272833/137‑1 (MQ=255) aCGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTc > 5:272833/1‑137 (MQ=255) aCGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGc > 7:199892/1‑149 (MQ=255) gcgcACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGt < 2:335997/149‑1 (MQ=255) gcacttgcacttCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGa < 6:122531/149‑1 (MQ=255) gcacttgcacttCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGa < 6:11596/149‑1 (MQ=255) acttgcacttCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAg > 5:323776/1‑148 (MQ=255) acttgcacttCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAg > 5:296422/1‑148 (MQ=255) gcacttCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACgg > 2:224543/1‑149 (MQ=255) cacttCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACgg < 5:337220/148‑1 (MQ=255) acttCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACTCACATCGGTCTTGAGAACGAAGTTGAGGGTTTTCTTCTCTTCCTGACCCATCGTCTCGAAGATGTTTTCCAGCTTGCAGGCGAGAGAACAGGc > 4:120173/1‑149 (MQ=255) acttCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGc < 6:323776/149‑1 (MQ=255) cttCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGcc > 3:266910/1‑149 (MQ=255) ttCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGa > 1:226087/1‑113 (MQ=255) ttCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGa < 2:226087/113‑1 (MQ=255) ttCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGc > 6:2805/1‑147 (MQ=255) tcgtTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCtt < 3:199015/149‑1 (MQ=255) cccAGGCCGACGAGCTAACCCTGAAGCGCTTCCAGATAACC‑ACTCACATCGTGATTTAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCTGCGTGAGCACGGGCCAGCTTGACCta < 2:219335/149‑2 (MQ=255) ccAGGCCGTCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTcg < 3:305707/149‑1 (MQ=255) ccAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTcg < 8:199892/149‑1 (MQ=255) ggCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGCCCTCGCGa > 8:255533/1‑149 (MQ=255) ggCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGa < 6:296422/149‑1 (MQ=255) cgccgAGCGAACCCTGCAGCGCTTCCAGAGAACCTACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGa > 1:45976/1‑100 (MQ=255) cgccgAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGa < 2:45976/99‑1 (MQ=255) gAGCGAACCCTGCAGCGCTTCCGGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATACTTGc > 7:50797/1‑149 (MQ=255) aGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACAGCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATACTTGcc < 6:57212/149‑1 (MQ=255) cGAACCCTGCAGCGCTTCCAGAGATCC‑ACGCACTTCGGTCTGGAGAACGTTGTTGAGGGTTTTGTTCTGTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGTCGTGAGCACGGGCCAGCTTGACCTCGCGTTACTTGCCtt < 4:155733/149‑1 (MQ=255) aaCCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATACTTGCCTTGa < 3:3062/149‑1 (MQ=255) aCCCTCCAGCCCTCCCCGCGAACC‑ACCCACACCGGCCTTGACACCGATCTTGAGCGGTTTCTTCTCATCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGACCACGGGCCAGCTTGACCTCGCGATACTTGCCTTGAc < 4:266910/149‑1 (MQ=255) ccTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATACTTGCCTTGACg > 8:312630/1‑148 (MQ=255) aGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATACTTGCCTTGACGGAACAg < 1:299538/149‑1 (MQ=255) gcgcTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATACTTGCCTTGACGGAACAgg < 7:20408/149‑1 (MQ=255) agagAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATACTTGCCTTGACGGAACAGGGCAACtt > 8:215161/1‑148 (MQ=255) agagAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATACTTGCCTTGACGGAACAGGGCAACtt > 5:88823/1‑148 (MQ=255) agagAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATACTTGCCTTGACGGAACAGGGCAACtt > 2:14041/1‑148 (MQ=255) cctcaacaTCGTTCTCAAGACCGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATACTTGCCTTGAc > 3:203937/6‑126 (MQ=255) cctcaacaTCGTTCTCAAGACCGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATACTTGCCTTGAc < 4:203937/121‑1 (MQ=255) gCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATACTTGCCTTGACGGAACAGGGCAACTTCACGGGCTttc < 5:58699/149‑1 (MQ=255) acaTCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATACTTGCCTTGACGGAACAGGGCAACTTCACGGGCTttctt < 4:72707/149‑1 (MQ=255) caTCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATACTTGCCTTGACGGAACAGGGCAACTTCACGGGCTttcttc < 5:2805/149‑1 (MQ=255) aTCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATACTTGCCTTGACGGAACAGGGCAACTTCACGGGCTTtcttct > 3:25196/1‑149 (MQ=255) tCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATACTTGCCTTGACGGAACAGGGCAACTTCACGGGCTTTCTtctc > 6:37224/1‑149 (MQ=255) ttGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATACTTGCCTTGACGGAACAGGGCAACTTCACGGGCTTTCTTCTCGTCgg > 2:212244/1‑148 (MQ=255) agaACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCAc < 3:202153/76‑1 (MQ=255) agaACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCAc > 4:202153/1‑76 (MQ=255) aCGATTGTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTTCCGGCGTGAGCACGGTCCATCTTGACCTCGCGATACTTGCCTTGACGTAACAGGGCAACTTCACTGGCTTTCTTCTCGTCGGCAACCAc < 8:147455/149‑1 (MQ=255) | TGCATTCGAAGCCAGCGCCAGGTTGGCATCGCTCTCGGTGATACCACCGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACC‑ACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATACTTGCCTTGACGGAACAGGGCAACTTCACGGGCTTTCTTCTCGTCGGCAACCAC > NC_002947/5356667‑5356963 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |