| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 395,848 | T→G | 6.5% | intergenic (+30/+174) | fdhA → / ← PP_0329 | formaldehyde dehydrogenase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 395,848 | 0 | T | G | 6.5% | 240.0 / 7.1 | 77 | intergenic (+30/+174) | fdhA/PP_0329 | formaldehyde dehydrogenase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (38/34); new base G (2/3); total (40/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.67e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.64e-01 | |||||||||||
GTAGGTGTGCAGGTGATCAACCTGGATCAGGCGCCGGAAGGGTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTTCCGAAGCCTGGTGAGTGGCCCTGGAGCGAAGGGCCA > NC_002947/395705‑395991 | gTAGGTGTGCAGGTGATCAACCTGGATCAGGCGCCGGAAGGGTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAgg > 3:36536/1‑149 (MQ=255)gTAGGTGTGCAGGTGATCAACCTGGATCAGGCGCCGGAAGGGTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCCAg < 4:10062/148‑1 (MQ=255) ggTGTGCAGGTGATCAACCTGGATCAGGCGCCGGAAGGGTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑c < 6:231133/149‑1 (MQ=255) gtgtGCAGGTGATCAACCTGGATCAGGCGCCGGAAGGGTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑Ct > 5:204534/1‑149 (MQ=255) tgtgCAGGTGATCAACCTGGATCAGGCGCCGGAAGGGTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGATGCGAGGGG‑‑Ctc < 3:75472/149‑2 (MQ=255) tgCAGGTAATCAACCTGGATCAGGCGCCGGAAGGGTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑Cttt < 5:170003/148‑1 (MQ=255) aGGTGATCAACCTGGATCAGGCGCCGGAAGGGTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGt < 8:256905/149‑1 (MQ=255) aGGTGATCAACCTGGATCAGGCGCCGGAAGGGTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGt < 6:186437/149‑1 (MQ=255) aTCAACCTGGATCAGGCGCCGGAAGGGTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTATAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCGAtt > 6:92899/1‑149 (MQ=255) aTCAACCTGGATCAGGCGCCGGAAGGGTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCAt > 2:40432/1‑148 (MQ=255) cTGGATCAGGCGCCGGAAGGGTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGAt > 1:168607/1‑148 (MQ=255) aTCAGGCGCCGGAAGGGTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGAc < 1:210229/149‑1 (MQ=255) aTCAGGCGCCGGAAGGGTATGGCGAGTTTGATGCAGGTGAGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGACTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATATGa < 5:92899/148‑1 (MQ=255) tCAGGCGCCGGAAGGGTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACa > 7:166011/1‑149 (MQ=255) tCAGGCGCAGGAAGGGTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCAGCACAAAATGTGGGGTGC‑GCCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CATTTTGTCCATTCTGATAAGACa > 2:118532/1‑149 (MQ=255) aGGCGCCGGAAGGGTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCCGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACAt < 1:55998/149‑1 (MQ=255) ggCGCCGGAAGGGTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACAtct < 3:55167/149‑1 (MQ=255) tGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCtt < 3:55241/149‑1 (MQ=255) tGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCtt > 2:176737/1‑149 (MQ=255) tGGCGAGTTTGATGCAGGTGTGCCAAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCtt > 3:29931/1‑149 (MQ=255) ggCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTg > 6:113640/1‑149 (MQ=255) gCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGt > 7:22775/1‑149 (MQ=255) cGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTc < 6:204534/149‑1 (MQ=255) cGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTAAATTCTGATAAGACATCTCGGCCGGAGGTGCtttt > 6:257445/1‑146 (MQ=255) tttGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCAt > 5:263490/1‑147 (MQ=255) tttGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATaa < 5:257445/149‑1 (MQ=255) tttGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATaa < 5:175256/149‑1 (MQ=255) ttGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATaa < 2:171558/148‑1 (MQ=255) gCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCtt > 8:281760/1‑136 (MQ=255) gCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCttt > 2:255485/1‑149 (MQ=255) tgCCGAAGAAATTAGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCTTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGCCCGGAGGAGCTTGTCATAAGCCTTTCAtagat > 4:141091/1‑145 (MQ=255) ccGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGc < 7:168670/125‑1 (MQ=255) ccGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGc > 8:168670/1‑125 (MQ=255) cGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCtttt > 2:6834/1‑149 (MQ=255) cGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCtttt > 8:304311/1‑149 (MQ=255) gaagaaATTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCtttt > 1:191870/1‑148 (MQ=255) gaagaaATTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTg < 8:166011/149‑1 (MQ=255) ataaaTTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GTCGTAATCATCGTCGACTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTTCTTGTAATAATCCTTTCATCGCTTTTGaa < 1:228889/147‑1 (MQ=255) agaaATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTg > 1:231707/1‑148 (MQ=255) agaaATTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGaa < 2:168607/149‑1 (MQ=255) gaaATTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGTATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAg > 1:212654/1‑149 (MQ=255) gaaATTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAg < 7:304311/149‑1 (MQ=255) aaTTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTc < 4:36536/149‑1 (MQ=255) aTTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTc > 5:74786/1‑148 (MQ=255) ttATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTGATAAGCCTTTCATCGCTTTTGAAGTCGAtcgc < 1:40432/149‑1 (MQ=255) gCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGcac > 8:84213/1‑148 (MQ=255) cacaAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGcaca > 1:72393/1‑148 (MQ=255) cacaAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACAt < 8:22775/149‑1 (MQ=255) cacaAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CCTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCCAGCGCAGCCCGcaca > 7:60869/1‑148 (MQ=255) caAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATAc < 2:231707/149‑1 (MQ=255) aaaaTGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTg < 1:212969/101‑1 (MQ=255) aaaaTGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTg > 2:212969/1‑101 (MQ=255) aaaTGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCt < 5:113640/149‑1 (MQ=255) tgGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCtcatca < 4:29931/149‑1 (MQ=255) tGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTTcc < 8:14057/149‑1 (MQ=255) c‑ggcgTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGTATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTTCCGa < 2:212654/149‑1 (MQ=255) c‑ggcgTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAACGCCGCCCGCACATACCTCATCAGTTCCg > 2:110658/1‑148 (MQ=255) gTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTTCCGAAGcc > 3:140624/1‑149 (MQ=255) tAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTTCCGAAGCCt < 6:263490/149‑1 (MQ=255) aaTCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTTCCGAAGCCTg > 8:149588/1‑149 (MQ=255) cAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTTCCGAAGCCTGGt > 6:161752/1‑148 (MQ=255) aGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTTCCGAAGCCTGGTg < 7:84213/148‑1 (MQ=255) aGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTTCCGAAGCCTGGTGa < 1:176737/149‑1 (MQ=255) gAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTTCCGAAGCCTGGTGAGTGGcc < 1:6834/149‑1 (MQ=255) acaaaaAGCCCCT‑CGATGCGAGGGGCTCTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATAc > 7:249833/3‑117 (MQ=37) acaaaaAGCCCCT‑CGATGCGAGGGGCTCTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATAc < 8:249833/115‑1 (MQ=37) aaaaAGCCCCT‑CGATGCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTTCCGAAGCCTGGTGAGTGGcc > 4:6953/1‑143 (MQ=255) aaaaAGCCCCT‑CGATGCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTTCCGAAGCCTGGTGAGTGGcc < 3:6953/143‑1 (MQ=255) agagCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTTCCGAAGCCTGGTGAGTGGCCCTGGAGc > 5:80188/1‑148 (MQ=255) acccccT‑CGCATCGATGGG‑‑CTTTTTGTCCATTCTGTTAAGACATCTCGGCCGGAGGTGCTTGTGATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTTCCGAATCCTGGTGAGTGGCCCTGGAGCGaa < 4:238479/147‑1 (MQ=255) ccccT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTTCCGAAGCCTGGTGAGTGGCCCTGGAGCGAAgg < 6:74786/149‑1 (MQ=255) ccT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTTCCGAAGCCTGGTGAGTGGCCCTGGAGCGAAGGGc > 8:254987/1‑149 (MQ=255) cT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCTCCGCCCGCACATACCTCATCAGTTCCGAAGCCTGGTGAGTGGCCCTGGAGCGAAGGGc > 3:198547/1‑148 (MQ=255) cT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTTCCGAAGCCTGGTGAGTGGCCCTGGAGCGAAGGGc > 1:334552/1‑148 (MQ=255) t‑CGCATCGAGGGT‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATAGCTTTTGAAGTAGAGCGCCGCCAGCACATACCTCATAAGTTCCGAAGCCTGGTTAGTGGCCCTGGAGCGAAGGGCCa > 6:282504/1‑149 (MQ=255) t‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTTCCGAAGCCTGGTGAGTGGCCCTGGAGCGAAGGGCCa > 6:53014/1‑149 (MQ=255) t‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTTCCGAAGCCTGGTGAGTGGCCCTGGAGCGAAGGGCCa > 3:163608/1‑149 (MQ=255) | GTAGGTGTGCAGGTGATCAACCTGGATCAGGCGCCGGAAGGGTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGC‑GGCGTAATCAGCGTCGAGTAAAAAGAGCCCCT‑CGCATCGAGGGG‑‑CTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTTCCGAAGCCTGGTGAGTGGCCCTGGAGCGAAGGGCCA > NC_002947/395705‑395991 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |