| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,049,332 | G→C | 5.2% | S65T (AGC→ACC) ‡ | spoT → | bifunctional (p)ppGpp synthase/hydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,049,332 | 0 | G | C | 5.2% | 249.9 / 2.7 | 77 | S65T (AGC→ACC) ‡ | spoT | bifunctional (p)ppGpp synthase/hydrolase |
| Reads supporting (aligned to +/- strand): ref base G (35/38); new base C (2/2); total (37/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.65e-01 | |||||||||||
CCGAACAGGTCAACCTGGTTCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGC > NC_002947/6049188‑6049473 | ccGAACAGGTCAACCTGGTTCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCt > 6:974/1‑148 (MQ=255) gAACAGTTCATCCTTGTTCGGCGTGACTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTAAGTGACCCACCCGCTGGCCGTGGCGAGCATGCTCGCCGAGATGCACATGGACCATCAGAGCATGAt < 8:159500/149‑1 (MQ=255) aaCAGGTCAACCTGGTTCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATg > 1:184329/1‑149 (MQ=255) gTCAACCTGGTTCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATggcggc > 8:146427/1‑149 (MQ=255) gTCAACCTGGTTCGGCATGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATggcggc > 4:76191/1‑149 (MQ=255) tCAACCTGGTTCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATggcggc > 2:145858/1‑148 (MQ=255) aaCCTGGTTCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCAt > 8:130260/1‑149 (MQ=255) aaCCTGGTTCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCAt > 4:226480/1‑149 (MQ=255) ccTGGTTCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGGCTCTGATggtcc > 5:97579/1‑140 (MQ=255) ccTGGTTCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGGCTCTGATggtcc < 6:97579/143‑4 (MQ=255) cTGGTTCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCAtgct > 8:117103/1‑149 (MQ=255) tGGTTCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGcc < 1:47098/132‑1 (MQ=255) tGGTTCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGcc > 2:47098/1‑132 (MQ=255) ttCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATggc < 7:71232/136‑1 (MQ=255) ttCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATggc > 8:71232/1‑136 (MQ=255) ttCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCAc < 7:117103/149‑1 (MQ=255) ggCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGa < 5:114961/148‑1 (MQ=255) ggCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGa < 7:72716/148‑1 (MQ=255) ggCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGa < 7:7321/148‑1 (MQ=255) gCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGAtg < 1:48938/149‑1 (MQ=255) tGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGa > 1:229607/1‑149 (MQ=255) ccTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATc < 8:62485/149‑1 (MQ=255) cTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATc > 3:222505/1‑148 (MQ=255) gCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCgg > 5:115728/1‑149 (MQ=255) gCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCAGCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCgg > 3:211329/1‑149 (MQ=255) gAACAGGCCCACGATGGGCCACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCCCATGGACCATCAGAGCCGGCTGGCGGCCCTGCTGCACGATGTGCTCGAAGACACCGGCAt > 1:233539/1‑149 (MQ=255) gAACAGGCCCACGATGGGCAACGCCGCCGCAGGGGCGAGCCCTACGTGACCAACCCGCTGGCCGTGGCCAGCATCCTAGCCGACATGCACATGGACCATAAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCAt < 7:50240/149‑1 (MQ=255) aCAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTACACGATGTGATCGAAGACACCGGCATCg < 2:281850/149‑1 (MQ=255) gCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCaa < 4:181989/149‑1 (MQ=255) ccACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGa > 6:197224/1‑125 (MQ=255) ccACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGa < 5:197224/125‑1 (MQ=255) gATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGc > 1:71934/1‑149 (MQ=255) ggCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACAGCGGCATCGCCAAGGAAGCCCTc < 2:84352/149‑1 (MQ=255) aaCGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTcagc < 3:198052/149‑1 (MQ=255) aaCGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTcagc < 5:33804/149‑1 (MQ=255) aCGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTcagcc < 8:64925/149‑1 (MQ=255) gccgcAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAg < 8:91542/135‑1 (MQ=255) gccgcAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAg > 7:91542/1‑135 (MQ=255) cAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTg < 2:184329/149‑1 (MQ=255) cAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTg < 4:222505/149‑1 (MQ=255) gCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGc > 2:261642/1‑146 (MQ=255) gAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGAc < 1:159656/149‑1 (MQ=255) cccTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCGCATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGt > 6:93205/1‑149 (MQ=255) cTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTgg < 4:211329/149‑1 (MQ=255) gACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAAt > 6:67942/1‑149 (MQ=255) cccacccGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGTACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTg < 2:30399/149‑1 (MQ=255) ccacccGCTGGCCGTGGCCAGCATCCTCGCCGACATGCGCATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTgg < 5:93205/149‑1 (MQ=255) ccacccGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTgg > 1:153822/1‑149 (MQ=255) cacccGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGt < 6:115728/149‑1 (MQ=255) acccGCTGGCCCTGGCCAGCATCCGCGCCGACATGCACATGGGCCATCAACGCCGGATGGCGGCCATGCGGCACGCTGGGTACCAAGCCACCGGCATCGCCAAGGAAGCCCGCAGCCAGCAGATTGGCGCGACCGGGGCCGAATTgggc > 4:327666/1‑147 (MQ=255) gatgCTGGCCACGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTg < 6:279498/133‑1 (MQ=255) gatgCTGGCCACGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTg > 5:279498/4‑136 (MQ=255) ccGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGa > 6:189736/1‑149 (MQ=255) atgCTGGCCACGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGa > 7:220751/3‑149 (MQ=255) ccGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTc < 2:88586/149‑1 (MQ=255) cGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCa < 7:146427/149‑1 (MQ=255) gCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGt > 3:234278/1‑143 (MQ=255) gCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGt < 4:234278/143‑1 (MQ=255) ccAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAg < 2:229607/149‑1 (MQ=255) cAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGc > 6:101678/1‑149 (MQ=255) cATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGa < 3:226480/149‑1 (MQ=255) cATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGa < 7:130260/149‑1 (MQ=255) cATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGa < 1:261642/149‑1 (MQ=255) tCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCATCAGCCAGCAGTTAGGCGAGACAGTGGCCGAATTGCTCGATTGGGTCAGCAAGCAGAcc > 5:207524/1‑146 (MQ=255) aTGCACATGGACCATCAGAGCCTGATGGCGGCCACGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAAttt > 4:160969/1‑149 (MQ=255) gCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTc > 7:84083/1‑148 (MQ=255) cacaTGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCga < 1:145858/149‑1 (MQ=255) cacaTGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCga < 5:67942/149‑1 (MQ=255) caTGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCgaga < 5:189736/149‑1 (MQ=255) aTGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAAt > 2:47390/1‑141 (MQ=255) aTGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAAt < 1:47390/141‑1 (MQ=255) aTGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGAc > 3:82480/1‑149 (MQ=255) aTGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGAc > 1:187108/1‑149 (MQ=255) ccgccATCAGGCTCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGa > 5:317395/4‑134 (MQ=255) ccgccATCAGGCTCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGa < 6:317395/131‑1 (MQ=255) aCCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAg < 5:974/149‑1 (MQ=255) cATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGc > 8:88077/1‑149 (MQ=255) | CCGAACAGGTCAACCTGGTTCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGC > NC_002947/6049188‑6049473 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |