Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 518,782 | G→A | 7.1% | A57A (GCG→GCA) | argC → | N‑acetyl‑gamma‑glutamyl‑phosphate reductase |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 518,782 | 0 | G | A | 7.1% | 165.9 / 2.3 | 56 | A57A (GCG→GCA) | argC | N‑acetyl‑gamma‑glutamyl‑phosphate reductase |
Reads supporting (aligned to +/- strand): ref base G (27/25); new base A (2/2); total (29/27) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
CGGGTTACACCGGCGTCGAACTGTTGCGTCTGCTGGCACAGCATCCACAGGCCGAAGTGGCGGTCATCACTTCGCGCTCCGAGGCGGGCGTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTGGGGGCCTGCGATGTGGTGTTCTTC‑GCCACTCCGCATGGTGTTGCACACGCCCTGGCCGGTGAGCTGCTGGCGGCTGGCACCAAGGTGATCGACCTGTCGGCCGACTTCCGTCTGCAGGATG > NC_002947/518640‑518930 | cGGGTTACACCGGCGTCGAACTGTTGCGTCTGCTGGCACAGCATCCACAGGCCGAAGTGGCGGTCATCACTTCGCGCTCCGAGGCGGGCGTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGc > 2:320376/1‑149 (MQ=255) acCGGCGTCGAACTGTTGCGTCTGCTGGCACAGCATCCACAGGCCGAAGTGGCGGTCATCACTTCGCGCTCCGAGGCGGGCGTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCGGa < 2:257140/149‑1 (MQ=255) cGGCGTCGAACTGTTGCGTCTGCTGGCACAGCATCCACAGGCCGAAGTGGCGGTCATCACTTCGCGCTCCGAGGCGGGCGTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCg > 3:139117/1‑133 (MQ=255) cGGCGTCGAACTGTTGCGTCTGCTGGCACAGCATCCACAGGCCGAAGTGGCGGTCATCACTTCGCGCTCCGAGGCGGGCGTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCg < 4:139117/133‑1 (MQ=255) tCGAACTGTTGCGTCTGCTGGCACAGCATCCACAGGCCGAAGTGGCGGTCATCACTTCGCGCTCCGAGGCGGGCGTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAg > 6:130984/1‑149 (MQ=255) ggaCTGTTGCGTCTGCTGGCACCGCCTCCACAGGCCGAAGTGGCGGTCAGCACGTCGCGCGCCGAGGCGGGCGTGGCGGGGGCGGGGATGTACCCGAACCTGCGCGGCCCCGATGCCGGGGTGGCGTGCGGCGTGCGGGGCAGCAAGGc > 2:752/3‑149 (MQ=255) aaCTGTTGCGTCTGCTGGCACAGCATCCACAGGCCGAAGTGGCGGTCATCACTTCGCGCTCCGAGGCGGGCGTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGct > 3:148419/1‑149 (MQ=255) cTGTTGCGTCTGCTGGCACAGCATCCACAGGCCGAAGTGGCGGTCATCACTTCGCGCTCCGAGGCGGGCGTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGctct > 1:181651/1‑149 (MQ=255) tGTTGCGTCTGCTGGCACAGCATCCACAGGCCGAAGTGGCGGTCATCACTTCGCGCTCCGAGGCGGGCGTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCg < 4:235398/134‑1 (MQ=255) tGTTGCGTCTGCTGGCACAGCATCCACAGGCCGAAGTGGCGGTCATCACTTCGCGCTCCGAGGCGGGCGTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCg > 3:235398/1‑134 (MQ=255) ttGCGTCTGCTGGCACAGCATCCACAGGCCGAAGTGGCGGTCATCACTTCGCGCTCCGAGGCGGGCGTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGTCGGACAGCAAGGCTCTg < 4:117125/147‑1 (MQ=255) cGTCTGCTGGCACAGCATCCACAGGCCGAAGTGGCGGTCATCACTTCGCGCTCCGAGGCGGGCGTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTggggg < 4:148419/148‑1 (MQ=255) cGTCTGCTGGCACAGCATCCACAGGCCGAAGTGGCGGTCATCACTTCGCGCTCCGAGGCGGGCGTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTGGGGGc < 1:320376/149‑1 (MQ=255) tgctgGCACAGCATCCACAGGCCGAAGTGGCGGTCATCACTTCGCGCTCCGAGGCGGGCGTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTg < 4:295846/140‑1 (MQ=255) tgctgGCACAGCATCCACAGGCCGAAGTGGCGGTCATCACTTCGCGCTCCGAGGCGGGCGTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTg > 3:295846/1‑140 (MQ=255) ctgGCACAGCATCCACAGGCCGAAGTGGCGGTCATCACTTCGCGCTCCGAGGCGGGCGTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTGGGGGCCTg < 7:168698/146‑1 (MQ=255) ctgGCACAGCATCCACAGGCCGAAGTGGCGGTCATCACTTCGCGCTCCGAGGCGGGCGTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTGGGGGCCTGc < 4:259434/147‑1 (MQ=255) ctgGCACAGCATCCACAGGCCGAAGTGGCGGTCATCACTTCGCGCTCCGAGGCGGGCGTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTGGGGGCCTGCGa > 8:48830/1‑149 (MQ=255) caGCATCCACAGGCCGAAGTGGCGGTCATCACTTCGCGCTCCGAGGCGGGCGTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTGGGGGTCTGCGATgtggt < 1:752/149‑1 (MQ=255) aGCATCCACAGGCCGAAGTGGCGGTCATCACTTCGCGCTCCGAGGCGGGCGTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTGGGGGCCTGCGATgtggtg > 6:274302/1‑149 (MQ=255) aGCATCCACAGGCCGAAGTGGCGGTCATCACTTCGCGCTCCGAGGCGGGCGTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTGGGGGCCTGCGATgtggtg < 1:284696/149‑1 (MQ=255) gCATCCACAGGCCGAAGTGGCGGTCATCACTTCGCGCTCCGAGGCGGGCGTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTGGGGGCCTGCGATGTGgtgt > 8:246318/1‑149 (MQ=255) cATCCACAGGCCGAAGTGGCGGTCATCACTTCGCGCTCCGAGGCGGGCGTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTgggg > 1:151319/1‑132 (MQ=255) cATCCACAGGCCGAAGTGGCGGTCATCACTTCGCGCTCCGAGGCGGGCGTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTgggg < 2:151319/132‑1 (MQ=255) cATCCACAGGCCGAAGTGGCGGTCATCACTTCGCGCTCCGAGGCGGGCGTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTGGGGGCCTGCGATGTGGTGtt < 5:130984/149‑1 (MQ=255) aTCCACAGGCCGAAGTGGCGGTCATCACTTCGCGCTCCGAGGCGGGCGTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTGGGGGCCTGCGATGTGGTGttc < 6:103175/149‑1 (MQ=255) acaGGCCGAAGTGGCGGTCATCACTTCGCGCTCCGAGGCGGGCGTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTGGGGGCCTGCGATGTGGTGTTCTTC‑g > 3:250144/1‑149 (MQ=255) gCCGAAGTGGCGGTCATCACTTCGCGCTCCGAGGCGGGCGTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTGGGGGCCTGCGATGTGGTGTTCTTC‑GCCAc < 4:13726/149‑1 (MQ=255) ccGAAGTGGCGGTCATCACTTCGCGCTCCGAGGCGGGCGTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTGGGGGCCTGCGATGTGGTGTTCTTC‑GCCACt < 7:48830/149‑1 (MQ=255) ggTCATCACTTCGCGCTCCGAGGCGGGCGTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTg > 7:246638/1‑109 (MQ=255) ggTCATCACTTCGCGCTCCGAGGCGGGCGTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTg < 8:246638/109‑1 (MQ=255) tcatcaCTTCGCGCTCCGAGGCGGGCGTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTGGGGGCCTGCGATGTGGTGTTCTTC‑GCCACTCCGCATGGTGtt > 7:240472/1‑149 (MQ=255) tcatcaCTTCGCGCTCCGAGGCGGGCGTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCATTCAGCGTGCCGGACAGCAAGGCTCTGGGGGCCTGCTATGTGGTGTTCTTC‑GCCAATCCGCATGGTGtt > 5:153276/1‑149 (MQ=255) tcatcaCTTCGCGCTCCGAGGCGGGCGTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCATTCAGCGTGCCGGACAGCAAGGCTCTGGGGGCCTGCGATGTGGTGTTCTTC‑GCCACTCCGCATGGTGtt > 5:158251/1‑149 (MQ=255) atcaCTTCGCGCTCCGAGGCGGGCGTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTGGGGGCCTGCGATGTGGTGTTCTTC‑GCCACTCCGCATGGTGTTg > 6:246828/1‑148 (MQ=255) cTTCGCGCTCCGAGGCGGGCGTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTGGGGGCCTGCGATGTGGTGTTCTTC‑g > 5:142995/1‑126 (MQ=255) cTTCGCGCTCCGAGGCGGGCGTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTGGGGGCCTGCGATGTGGTGTTCTTC‑g < 6:142995/126‑1 (MQ=255) ttCGCGCTCCGAGGCGGGCGTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTGGGGGCCTGCGATGTGGTGTTCTTC‑GCCACTCCGCATGGTGTTGCACACg > 3:196208/1‑149 (MQ=255) tCCGAGGCGGGCGTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTGGGGGCCTGCGATGTGGTGTTCTTC‑GCCACTCCGCATGGTGTTGCACACGCCCTGGc > 8:206747/1‑149 (MQ=255) cGAGGCGGGCGTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTGGGGGCCTGCGATGTGGTGTTCTTC‑GCCACTCCGCATGGTGTTGCACACGCCCTGGCCg < 7:246318/149‑1 (MQ=255) aGGCGGGCGTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTGGGGGCCTGCGATGTGGTGTTCTTC‑GCCACTCCGCATGGTGTTGCACACGCCCTGGCCGGt < 5:274302/149‑1 (MQ=255) cgTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTGGGGGCCTGCGATGTGGTGTTCTTC‑GCCACTCCGCATGGTGTTGCACACGCCCTGGCCGGt > 5:24992/1‑142 (MQ=255) cgTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTGGGGGCCTGCGATGTGGTGTTCTTC‑GCCACTCCGCATGGTGTTGCACACGCCCTGGCCGGt < 6:24992/142‑1 (MQ=255) tggcggtggcggACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTGGGGGCCTGCGATGTGGTGTTCTTC‑GCCACTCCGCATGGTGTTGCACACGCCCTGGCCGGTGAGctgctg < 4:250144/149‑1 (MQ=255) tggcggtggcggACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTGGGGGCCTGCGATGTGGTGTTCTTC‑GCCACTCCGCATGGTGTTGCACACGCCCTGGCCGGTGAGctgctg > 1:186474/1‑149 (MQ=255) tggcggtggcggACATGTACCCGAACCTGCGCGGCCACTATGACGGGGTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTGGGGGCCTGCGATGTGGTGTTCTTCAGCCACTCCGCATGGTGTTGCACACGCCCTGGCCGGTGAgctgct < 1:71070/149‑1 (MQ=255) gcggACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTGGGGGCCTGCGATGTGGTGTTCTTC‑GCCACTCCGCATGGTGTTGCACACGCCCTGGCCGGTGAGCTGCTGGCGGCTg < 2:186474/148‑1 (MQ=255) aCCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTGGGGGCCTGCGATGTGGTGTTCTTC‑GCCACTCCGCATGGTGTTGCACACGCCCTGGCCGGTGAGCTGCTGGCGGCTGGCACCAAGGt > 4:241882/1‑148 (MQ=255) ccGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTGGGGGCCTGCGATGTGGTGTTCTTC‑GCCACTCCGCATGGTGTTGCACACGCCCTGGCCGGTGAGCTGCTGGCGGCTGGCACCAAGGTGAt > 5:3412/1‑149 (MQ=255) cTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTGGGGGCCTGCGATGTGGTGTTCTTC‑GCCACTCCGCATGGTGTTGCACACGCCCTGGCCGGTGAGCTGCTGGCGGCTGGCACCAAGGTGATCGACCt > 8:38041/1‑149 (MQ=255) cACTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTGGGGGCCTGCGATGTGGTGTTCTTC‑GCCACTCCGCATGGTGTTGCACACGCCCTGGCCGGTGAGCTGCTGGCGGCTGGCACCAAGGTGATCGACCTGTCGGCCGa > 3:3498/1‑149 (MQ=255) cTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTGGGGGCCTGCGATGTGGTGTTCTTC‑GCCACTCCGCATGGTGTTGCACACGCCCTGGCCGGTGAGCTGCTGGCGGCTGGCACCAAGGTGATCGACCTGTCGGCCGACt < 8:240472/149‑1 (MQ=255) cTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTGGGGGCCTGCGATGTGGTGTTCTTC‑GCCACTCCGCATGGTGTTGCACACGCCCTGGCCGGTGAGCTGCTGGCGGCTGGCACCAAGGTGATCGACCTGTCGGCCGACt < 2:181651/149‑1 (MQ=255) taagACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTGGGGGCCTGCGATGTGGTGTTCTTC‑GCCACTCCGCATGGTGTTGCACACGCCCTGGCCGGTGAGCTGCTGGCGGCTGGCACCAAGGTGATCGACCTGTCGGCCGACtt > 8:177713/4‑149 (MQ=255) tGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTGGGGGCCTGCGATGTGGTGTTCTTC‑GCCACTCCGCATGGTGTTGCACACGCCCTGGCCGGTGAGCTGCTGGCGGCTGGc > 8:262756/1‑118 (MQ=255) tGACGGGTTGGCATTCCGCGTGCCTGACAGCAAGGCGCTGGGGGCCTGCGATGTGGTGTTCTTC‑GCCACTCCGCATGGTGTTGCACACGCCCTGGCCGGTGAGCTGCTGGCGGCTGGCACCAAGGTGATCGACCTGTCGGCCGACTTcc < 6:158251/149‑1 (MQ=255) gccGGGTTGGCATTCAGCGTGCAGGACAGCAAGGCTCTGGGGGCCTGCGATGTGTTGTTATTC‑GCCACTCCGCATGGTGTTGCACACGCCCTGTCCGGTGAGCTGCTTGCGGCTGGCACCAAGGTTATCGACCTGTCGGCCGACTTcc < 6:153276/146‑1 (MQ=255) aCGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTGGGGGCCTGCGATGTGGTGTTCTTC‑GCCACTCCGCATGGTGTTGCACACGCCCTGGCCGGTGAGCTGCTGGCGGCTGGCACCAAGGTGATCGACCTGTCGGCCGACTTCCGt > 4:79129/1‑149 (MQ=255) gTTCAGCGTGCCGGACAGCAAGGCTCTGGGGGCCTGCGATGTGGTGTTCTTC‑GCCACTCCGCATGGTGTTGCACACGCCCTGGCCGGTGAGCTGCTGGCGGCTGGCACCAAGGTGATCGACCTGTCGGCCGACTTCCGTCTGCAGGATg > 4:90417/1‑149 (MQ=255) | CGGGTTACACCGGCGTCGAACTGTTGCGTCTGCTGGCACAGCATCCACAGGCCGAAGTGGCGGTCATCACTTCGCGCTCCGAGGCGGGCGTGGCGGTGGCGGACATGTACCCGAACCTGCGCGGCCACTATGACGGGTTGGCGTTCAGCGTGCCGGACAGCAAGGCTCTGGGGGCCTGCGATGTGGTGTTCTTC‑GCCACTCCGCATGGTGTTGCACACGCCCTGGCCGGTGAGCTGCTGGCGGCTGGCACCAAGGTGATCGACCTGTCGGCCGACTTCCGTCTGCAGGATG > NC_002947/518640‑518930 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |