| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 650,846 | T→A | 6.1% | intergenic (‑135/+45) | aroQ‑I ← / ← dsbD‑I | type II 3‑dehydroquinate dehydratase/thiol/disulfide interchange protein 1 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 650,846 | 0 | T | A | 6.1% | 249.8 / 4.8 | 82 | intergenic (‑135/+45) | aroQ‑I/dsbD‑I | type II 3‑dehydroquinate dehydratase/thiol/disulfide interchange protein 1 |
| Reads supporting (aligned to +/- strand): ref base T (45/32); new base A (3/2); total (48/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.45e-01 | |||||||||||
CGTTGCCATCTGCGGATTCCTTGGATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAATTTCGCTGCCGTTCGCA > NC_002947/650703‑650993 | cGTTGCCATCTGCGGATTCCTTGGATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATc > 4:71704/1‑149 (MQ=255) gCCATCTGCGGATTCCTTCGATTTGTAGGTCAAATCGACACAGCGCGGCGAGTGTGCCGGAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATTTAAATATCCgg < 6:256058/148‑1 (MQ=255) ggATTCCTTGGATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCAtt > 6:207222/1‑148 (MQ=255) gATTCCTTGGATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCAttt > 8:79476/1‑148 (MQ=255) cTTGGATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGAt > 8:306119/1‑149 (MQ=255) ttGGATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGAtt > 4:249308/1‑149 (MQ=255) ttGGATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGAtt > 6:284312/1‑149 (MQ=255) tttGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATTTAAATATCCGGTCAcata > 8:35590/1‑131 (MQ=255) tttGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATTTAAATATCCGGTCAcata < 7:35590/134‑4 (MQ=255) tAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGc > 3:170740/1‑149 (MQ=255) aGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCt > 3:318568/1‑149 (MQ=255) ggCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTcg > 6:263050/1‑149 (MQ=255) ggCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTcg > 5:297561/1‑149 (MQ=255) cAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTcgcg < 3:71704/149‑1 (MQ=255) gACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAg < 6:1386/148‑1 (MQ=255) acaGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGaa < 2:10976/144‑1 (MQ=255) acaGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGaa > 1:10976/1‑144 (MQ=255) acaGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTta > 4:134608/1‑148 (MQ=255) aGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGtt < 3:193284/145‑1 (MQ=255) aGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGtt > 4:193284/1‑145 (MQ=255) gcgcGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGa < 5:284312/149‑1 (MQ=255) gcgcGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGa < 5:263050/149‑1 (MQ=255) cgcgGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGAc < 7:157976/149‑1 (MQ=255) cgcgGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGAc < 4:42060/149‑1 (MQ=255) ggcgAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGa > 7:260230/1‑149 (MQ=255) ggcgAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGa < 8:260230/149‑1 (MQ=255) agggtgCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGGGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACttt < 7:73680/146‑1 (MQ=255) ccGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCcgcg > 5:147817/1‑149 (MQ=255) ccGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCcgcg > 4:94684/1‑149 (MQ=255) ccGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCcgcg > 1:298943/1‑149 (MQ=255) cGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACAGACTTTGCcgcg > 4:48178/1‑148 (MQ=255) tAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCAc < 7:79476/149‑1 (MQ=255) aaGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCAcgc > 1:300261/1‑149 (MQ=255) gCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCAcgcgc < 4:170740/149‑1 (MQ=255) gCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCAcgcgc < 4:318568/149‑1 (MQ=255) aaGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAAt > 7:29187/1‑149 (MQ=255) gtgtCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCt > 4:80055/1‑149 (MQ=255) cAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGAAGATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTgcgc > 1:98193/1‑149 (MQ=255) cAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGtt > 4:267930/1‑108 (MQ=255) cAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGtt < 3:267930/108‑1 (MQ=255) cAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTgcgc < 8:262016/148‑1 (MQ=255) aGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGcgcg > 7:256265/1‑148 (MQ=255) aGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGcgcg > 5:324530/1‑148 (MQ=255) aGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGa < 2:300261/149‑1 (MQ=255) ttCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAAt > 7:149014/1‑149 (MQ=255) ccGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCa > 8:111675/1‑149 (MQ=255) ggCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCAcc < 3:57980/149‑1 (MQ=255) gCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCg < 1:96623/149‑1 (MQ=255) cAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCgg < 3:249308/149‑1 (MQ=255) aTAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCa < 5:207222/149‑1 (MQ=255) tAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCAt < 7:306119/149‑1 (MQ=255) tAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCAt < 6:297561/149‑1 (MQ=255) gCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCAtt > 3:46916/1‑148 (MQ=255) gCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTAtct > 6:333131/1‑149 (MQ=255) aCGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCg > 6:308045/1‑149 (MQ=255) cGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCAttt > 4:139231/1‑142 (MQ=255) cGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCAttt < 3:139231/142‑1 (MQ=255) cGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGc < 3:48178/149‑1 (MQ=255) gATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCg > 2:313425/1‑135 (MQ=255) gATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCg < 1:313425/135‑1 (MQ=255) tGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCg < 8:23475/133‑1 (MQ=255) tGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCg > 7:23475/1‑133 (MQ=255) cGAGGTACGCGCGAAGTATGTGACCGG‑ATATTTAAATACGGTCACTCATTTCAGGATTTTTACGAGCTCGCGGGAAGTTATAGACAGACTTTGCCGCGCACGCGCGTCAGAATCTGCGAGAATTCCCCGGCAGTTATCTCGCCAATCAc > 4:83951/1‑149 (MQ=255) gAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAACTCACCGGCATTTATCTCGCCAATCAcc < 2:298943/149‑1 (MQ=255) ggTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCAccc > 4:149324/1‑148 (MQ=255) gTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCAcc > 8:62045/1‑146 (MQ=255) gTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCAcc < 7:62045/146‑1 (MQ=255) cgcgcgAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATc < 8:256265/148‑1 (MQ=255) gcgAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCg > 2:161439/1‑149 (MQ=255) gAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGAATTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCgg > 1:240130/1‑148 (MQ=255) aGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTaa < 3:134608/149‑1 (MQ=255) aGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTaa < 6:147817/149‑1 (MQ=255) agtgACCGG‑ATTTAAATATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAATTTc > 7:297693/2‑149 (MQ=255) tgACCGG‑ATTTAAATATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAATTTCGc > 4:169369/1‑149 (MQ=255) tgACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAATTTCGc > 5:112799/1‑149 (MQ=255) gACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAATTTCgat > 6:136016/1‑147 (MQ=255) aCCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCTGTAATTTCGCTg > 4:181191/1‑149 (MQ=255) aCCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAATTTCGc < 7:259083/147‑1 (MQ=255) aCCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAATTTCGc > 8:259083/1‑147 (MQ=255) gg‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAATTTCGCTGCCg > 3:242958/1‑149 (MQ=255) g‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAATTTCGCTGCCGt > 7:186003/1‑149 (MQ=255) atTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAATTTCGCTGCCGTTCg > 8:278784/1‑149 (MQ=255) tttAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAATTTCGCTGCCGTTCg > 6:161522/1‑148 (MQ=255) tAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAATTTCGCTGCCGTTCgca < 8:29187/148‑1 (MQ=255) tAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAATTTCGCTGCCGTTCgca < 3:80055/148‑1 (MQ=255) | CGTTGCCATCTGCGGATTCCTTGGATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGG‑ATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAATTTCGCTGCCGTTCGCA > NC_002947/650703‑650993 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |