| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 743,450 | T→C | 7.7% | intergenic (+129/+145) | PP_0635 → / ← PP_0636 | group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 743,450 | 0 | T | C | 7.7% | 188.0 / 4.7 | 66 | intergenic (+129/+145) | PP_0635/PP_0636 | group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base T (27/33); new base C (2/3); total (30/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.38e-01 | |||||||||||
GCTTAGCCGCGTAACCTGAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGTGGCGGTTTCAAGCTAGCTTGGCGGTCACGCTAAGCCGAGTGAGGCATTCGATCCTGC > NC_002947/743303‑743595 | gCTTAGCCGCGTAACCTGAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑a < 2:58513/149‑1 (MQ=255) cTTAGCCGCGTAACCTGAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑a > 2:204006/1‑148 (MQ=255) aGCCGCGTAACCTGAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑ACa < 4:92867/147‑1 (MQ=255) aGCCGCGTAACCTGAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑ACAt < 7:26473/148‑1 (MQ=255) gCCGCGTAACCTGAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑ACATAg > 6:276730/1‑149 (MQ=255) ccGCGTAACCTGAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGTCCGCTATGTAACGCAACCGAAGGTTGCTTC‑ACATAGc < 8:106462/149‑1 (MQ=18) ccGCGTAACCTGAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGTCCGCTATGTAACGCAACCGAAGGTTGCTTC‑ACATAGc < 7:132851/149‑1 (MQ=18) aCCTGAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑ACATAGCGGacaca > 6:15987/1‑149 (MQ=255) cTGAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGTCCGCTATGTAACGCAACCGAAGGTTGCTTC‑ACATAGCGGgcacac > 4:247184/1‑148 (MQ=18) tGAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑ACATAGCGGACACACAg > 3:129229/1‑149 (MQ=255) aaCCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGTCCGCTATGTAACGCAACCGAAGGTTGCTTC‑ACATAGCGGGcacacaa < 3:247184/147‑2 (MQ=18) aaCCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑ACATAGCGGACACACAGc < 2:236930/148‑1 (MQ=255) aCCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑ACATAGCGGACACACAGcgt > 3:261780/1‑149 (MQ=255) gccgTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑ACATAGCGGACACACAGcgtcgt < 5:12524/149‑1 (MQ=255) gccgTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑ACATAGCGGACACACAGcgtcgt < 3:151947/149‑1 (MQ=255) tACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑ACATAGCGGACACACAGcgtc < 2:211991/141‑1 (MQ=255) tACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑ACATAGCGGACACACAGcgtc > 1:211991/1‑141 (MQ=255) cGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTAACATAGCGGACACACAGCGTCGTGACTTGc < 1:204006/149‑1 (MQ=255) accaCCGTGCGTACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCg > 4:189171/4‑149 (MQ=255) accaCCGTGCGTACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCg > 2:280500/4‑149 (MQ=255) accaCCGTGCGTACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCg > 4:327533/4‑149 (MQ=255) aaCCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCggg < 8:51269/149‑1 (MQ=255) ccGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGa < 1:127528/149‑1 (MQ=255) gttcGCACGGTGGTGTTAGAGGACGGAGGGTGTGAATCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGaaa < 4:61456/146‑1 (MQ=255) gTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGaaa > 3:210263/1‑149 (MQ=255) aCGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACtt > 7:26730/1‑149 (MQ=255) cGGTTGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTg < 5:221558/149‑1 (MQ=255) tgAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCgcggc < 6:128607/149‑1 (MQ=255) agagGACGGCGGGTGTGAATCCGCCTACTACTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑AAAAAGCGGACACACAGCGTCGTGAATTGCCGGGCAAACTACTTGGTAGCGGCgt > 6:110194/1‑149 (MQ=39) ggACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGtgtg < 2:120799/149‑1 (MQ=255) ggACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGtgtg < 4:129229/149‑1 (MQ=255) cggcggGTGTGAATCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAg < 5:144139/149‑1 (MQ=255) cggGTGTGAATCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAg > 4:262164/1‑146 (MQ=255) gggTGTGAATCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGCCTTCTATGTGTTGTTTTCTTCGGTTGCGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCaga < 1:280500/149‑1 (MQ=255) gggTGTGAATCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCaga < 3:327533/149‑1 (MQ=255) gggTGTGAATCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCaga < 6:309895/149‑1 (MQ=255) gtgtGAATCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCCTTTGTTTCCCCGATATGTAAAGCAACATACGGTTGCTTA‑ACTTACCGGAAACACACCTTCTTGACTTACAGGGAAAAATAATTTGTAGAGGCGtttgataca > 1:237442/1‑141 (MQ=255) aTCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAg < 5:15987/149‑1 (MQ=255) gCCTCCTACTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGa < 5:276730/149‑1 (MQ=255) tACTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGtt > 5:237532/1‑148 (MQ=255) aCTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGa > 1:323965/1‑149 (MQ=255) aCTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGa > 1:225249/1‑149 (MQ=255) aCTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGa > 1:329104/1‑149 (MQ=255) gATTGCGCGAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGt > 7:133752/1‑149 (MQ=255) ttGCGCGAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGTCTGTAGGGGAGCGGTGACAgagt > 8:310293/1‑146 (MQ=255) gcgAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCgt < 4:289728/110‑1 (MQ=255) gcgAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGTGGCGGt > 5:308642/1‑149 (MQ=255) gAAATCAGACCTGCC‑TTGTGTTCCCGCTATGTGAAGCAAACTTCGGTTGCGTT‑AAATAGCGGACACACAGCGTAGTGAATTGCAGGGGAAACTAATTGGTCGCGGCGTGTGGAGAAGATCATGTAGGGGAGCGTTGAAAGTTGCGGtt > 2:158652/1‑148 (MQ=255) aaTCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGTGGCGGTTTCa < 3:189171/149‑1 (MQ=255) cc‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGTGGCGGTTTCAAGCTAGCTTgg < 8:133752/149‑1 (MQ=255) tgtgtgCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGTGGCGGTTTCAAGCTAGCTTGGCgg > 4:327128/1‑149 (MQ=255) tccGCTATGTAACGCAACCGAAGGTTGCTTC‑ACATAGCGGGCACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGTGGCGGTTTCAAGCTAGCTTGGCGGTCACGc > 3:36402/2‑149 (MQ=37) aaGCAACCTTCGGTTGCGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGTGGCGGTTTCAAGCTAGCTTGGCGGTCACGCTAAGCCGAGt < 5:347610/148‑1 (MQ=255) aaGCAACCTTCGGTTGCGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGTGGCGGTTTCAAGCTAGCTTGGCGGTCACGCTAAGCCGAGt < 4:261780/148‑1 (MQ=255) gCAACCTTCGGTTGCGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGTGGCGGt > 5:308737/1‑112 (MQ=255) gCAACCTTCGGTTGCGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGTGGCGGt < 6:308737/112‑1 (MQ=255) aaCCTTCGGTTGCGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGGCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGTGGGGGTTTCAAGCTAGATTGGCGGTCACGGTAAGCCGAGTGAgg > 6:266627/1‑148 (MQ=255) gTTGCGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGTGGCGGTTTCAAGCTAGCTTGGCGGTCACGCTAAGCCGAGTGAGGCATTCGATc < 2:323965/149‑1 (MQ=255) gTTGCGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGTGGCGGTTTCAAGCTAGCTTGGCGGTCACGCTAAGCCGAGTGAGGCATTCGATc < 2:329104/149‑1 (MQ=255) gTTGCGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGTGGCGGTTTCAAGCTAGCTTGGCGGTCACGCTAAGCCGAGTGAGGCATTCGATc < 7:310293/149‑1 (MQ=255) gCGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGTGGCGGTTTCAAGCTAGCTTGGCGGTCACGCTAAGCCGAGTGAGGCATTCGATCCt < 2:237442/148‑1 (MQ=255) gCGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGTGGCGGTTTCAAGCTAGCTTGGCGGTCACGCTAAGCCGAGTGAGGCATTCGATCCt < 4:210263/148‑1 (MQ=255) cGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGTGGCGGTTTCAAGCTAGCTTGGCGGTCACGCTAAGCCGAGTGAGGCATTCGATCCTg < 6:75058/148‑1 (MQ=255) cGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGTGGCGGTTTCAAGCTAGCTTGGCGGTCACGCTAAGCCGAGTGAGGCATTCGATCCTg > 5:75058/1‑148 (MQ=255) cGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGTGGCGGTTTCAAGCTAGCTTGGCGGTCACGCTAAGCCGAGTGAGGCATTCGATCCTGc > 4:151244/1‑149 (MQ=255) gTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAAACTGTAGGGGAGCGTTGACAGTGGCGGTTTCAAGCTAGCTTGGCGGTCACGCTAAGCCGAGTGAGGCATTCGATCCTGc > 6:262898/1‑148 (MQ=255) tt‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGTGGCGGTTTCAAGCTAGCTTGGCGGTCACGCTAAGCCGAGTGAGGCATTCGATCCTGc > 5:73624/1‑147 (MQ=255) | GCTTAGCCGCGTAACCTGAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCC‑TTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTT‑ACATAGCGGACACACAGCGTCGTGACTTGCCGGGGAAACTACTTGGTCGCGGCGTGTGGAGCAGAGACTGTAGGGGAGCGTTGACAGTGGCGGTTTCAAGCTAGCTTGGCGGTCACGCTAAGCCGAGTGAGGCATTCGATCCTGC > NC_002947/743303‑743595 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |