| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 980,761 | C→A | 5.4% | P68Q (CCG→CAG) | hscB → | DnaJ‑like molecular chaperone |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 980,761 | 0 | C | A | 5.4% | 303.4 / 5.4 | 93 | P68Q (CCG→CAG) | hscB | DnaJ‑like molecular chaperone |
| Reads supporting (aligned to +/- strand): ref base C (46/42); new base A (3/2); total (49/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.87e-01 | |||||||||||
Only 100 of 101 total aligned reads displayed.
TCTCGACAAGCTGGCCACTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCG > NC_002947/980615‑980907 | tctcGACAAGCTGGCCACTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGcgccgc > 7:11728/1‑149 (MQ=255)tctcGACAAGCTGGCCACTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGcgccgc > 8:17716/1‑149 (MQ=255)tctcGACAAGCTGGCCACTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGcgccgc > 1:324392/1‑149 (MQ=255) gACAAGCTGGCCACTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGCTCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGcgccgc < 5:345180/145‑1 (MQ=255) gACAAGCTGGCCACACGCTAACGCCAGCAGGCCCGCGAAGTCCATCCTAATCGCTATGCCGACGCCTCCGAGCGTGAAAAGAGTATTGATCTGCAAAAATACCCGCCCCTCAACCACGCTTACCAGA‑CCCTCCGCAGTGCGCcgcgaag > 4:18181/1‑146 (MQ=255) gCTGGCCACTCGCTATCGCGAGCTGGCCCGCCAAGTCCATACTGATCGATTTGCCGACGCCACCCATCGTCAGCACCGTATTGCGCTGGAAAAATACGCGGCCCTCAACCACGCTTACAAGA‑CGCTGCGCAGTGCGCCGCGTcgcccgc > 2:244102/1‑149 (MQ=255) ccACTCGCTATCGCGAGCTGGGCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTAc < 5:200260/149‑1 (MQ=255) ccACTCGCTATCGCGAGCTGGCCCGCTAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTAc < 3:18181/149‑1 (MQ=255) cACTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTAcc > 2:196914/1‑149 (MQ=255) tCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACctgc > 3:98558/1‑149 (MQ=255) gCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACctgctg < 3:308107/149‑1 (MQ=255) gCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACctgctg > 3:184643/1‑149 (MQ=255) cgAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCAt > 4:45099/1‑147 (MQ=255) cgAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCa < 7:215850/149‑1 (MQ=255) gAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAg < 4:184643/149‑1 (MQ=255) tGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGc > 7:301636/1‑149 (MQ=255) tGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGC‑TACCAGA‑CGCGGCGCACTGCGCAGCGTc < 6:86076/119‑1 (MQ=255) tGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGC‑TACCAGA‑CGCGGCGCACTGCGCAGCGTc > 5:86076/1‑119 (MQ=255) gCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCa < 4:212561/149‑1 (MQ=255) cgcgAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACCGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACg < 1:259150/149‑1 (MQ=255) aTCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTAc < 5:222627/116‑1 (MQ=255) aTCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTAc > 6:222627/1‑116 (MQ=255) aTCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCag > 3:220624/1‑149 (MQ=255) tCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCag > 7:276568/1‑148 (MQ=255) cTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCaggag < 7:17716/149‑1 (MQ=255) gATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGt > 4:184932/1‑149 (MQ=255) cGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCa < 8:11728/148‑1 (MQ=255) cTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACgg > 4:202633/1‑149 (MQ=255) tttGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAAGTCAGGGt > 1:304701/1‑149 (MQ=255) tGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTc < 2:324392/148‑1 (MQ=255) cGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACg > 7:242030/1‑149 (MQ=255) cGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGAcc < 3:184932/149‑1 (MQ=255) gCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGAccc > 2:271121/1‑149 (MQ=255) gCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGAcc > 6:162689/1‑148 (MQ=255) ccTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCt > 1:68251/1‑149 (MQ=255) tCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCaggag < 5:167885/129‑1 (MQ=255) tCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCaggag > 6:167885/1‑129 (MQ=255) cGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGa < 8:261441/147‑1 (MQ=255) cGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACt > 6:254415/1‑149 (MQ=255) gAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTc < 3:204113/135‑1 (MQ=255) gAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTc > 4:204113/1‑135 (MQ=255) aGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTc < 3:45099/149‑1 (MQ=255) gTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCctg > 2:115056/1‑149 (MQ=255) ttatcagcGTATTTCGCTGTAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAAGTCAGGGTCGTGGACCGTGACCTCctg < 2:304701/144‑1 (MQ=255) tGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAAGTCAGGGTCGTGGACCGTGACCTCctgg < 4:98558/149‑2 (MQ=255) gAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTcg < 2:270637/74‑1 (MQ=255) gAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCctgct > 7:289428/1‑149 (MQ=255) agcagcGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCctgct < 8:289428/148‑1 (MQ=255) cagcGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCctgctg > 3:269799/1‑147 (MQ=255) cagcGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTgca < 1:82632/149‑1 (MQ=255) agcGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTgcag < 4:269799/149‑1 (MQ=255) cGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTgcagca < 5:254415/149‑1 (MQ=255) cgcTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTgg < 1:127845/78‑1 (MQ=255) cgcTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTgg > 2:127845/1‑78 (MQ=255) cgcTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAg > 7:127558/1‑149 (MQ=255) gcTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGt > 7:12515/1‑149 (MQ=255) gAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGGAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGc < 1:115056/148‑1 (MQ=255) gAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGCCTTCCTGCTGCAGCAGATGCAGTGGCg > 7:311374/1‑149 (MQ=255) gAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGc < 5:191582/148‑1 (MQ=255) gAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCg > 3:264918/1‑149 (MQ=255) gAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTAGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTgcagc < 1:46899/136‑1 (MQ=255) gAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTAGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTgcagc > 2:46899/1‑136 (MQ=255) gAAAAATCCGCCGCCCTCAACGAAGCTTACCAGC‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACGTAT‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGc < 1:267168/149‑1 (MQ=255) aaaaaTCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTAGCTGCTGGCCATCAGCGGCGACG‑AA‑GTGCCCCAGGAGGTGACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGt < 1:244102/149‑1 (MQ=255) aaTCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGaa < 5:145904/149‑1 (MQ=255) tCCGCGGCCCTCAACGAGGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCCCGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAaga > 5:342917/1‑149 (MQ=255) tCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGaa > 5:107883/1‑147 (MQ=255) tCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGAGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGAGATCCTGCTGGAGCAGATGCAGTGGCGTGaa > 7:138000/1‑147 (MQ=255) ccGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAagag > 1:80130/1‑149 (MQ=255) cgcgGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AACTTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAagag < 1:271121/149‑1 (MQ=255) cgcgGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAagag < 5:162689/148‑1 (MQ=255) cgGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCAt < 7:163008/67‑1 (MQ=255) cgGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCAt > 8:163008/1‑67 (MQ=255) cTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCgaaga < 2:139542/149‑1 (MQ=255) tCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCgaaga > 4:201640/1‑148 (MQ=255) cAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCt > 4:223715/1‑141 (MQ=255) cAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCt < 3:223715/141‑1 (MQ=255) aaCGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACT‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACt < 8:301636/149‑1 (MQ=255) aaCGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAAc < 2:68251/148‑1 (MQ=255) cgacgCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTg > 3:121144/1‑148 (MQ=255) cgCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAgg < 3:201640/149‑1 (MQ=255) ttACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGAt > 7:28386/1‑148 (MQ=255) ttACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGAt > 2:99920/1‑148 (MQ=255) ccAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTgcagc > 7:76618/1‑107 (MQ=255) ccAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAg < 2:80130/149‑1 (MQ=255) ccAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAg > 4:274834/1‑149 (MQ=255) cAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGc > 4:233883/1‑149 (MQ=255) cAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGc > 1:46378/1‑149 (MQ=255) gA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCg < 8:242030/149‑1 (MQ=255) gA‑CGCGGCGCACTGCGCAGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAg < 7:186352/146‑1 (MQ=255) gA‑CGCGGCGCACTGCGCAGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAg > 8:186352/1‑146 (MQ=255) gA‑CGCGGCGCACTGCGCAGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGcc > 8:46471/1‑148 (MQ=255) a‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGa > 1:296019/1‑149 (MQ=255) cTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCt > 4:131488/1‑149 (MQ=255) tGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCtt > 1:304768/1‑149 (MQ=255) cgcAGTGCGCCGCGTCGCGCGCGCTACCTGCTGCCCATCAGCGGCCACG‑AA‑GTGCCCCAGCAGGTCACGGTCCACGACCCTGACGTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGATCTGCAGGATGAAGCCGACCtt > 3:273221/1‑147 (MQ=255) gcAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGAc < 1:196914/149‑1 (MQ=255) cgccgcGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTTGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTc > 3:241274/1‑149 (MQ=255) cgccgcGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTc > 1:3065/1‑149 (MQ=255) gccgcGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCg > 4:38233/1‑149 (MQ=255) | TCTCGACAAGCTGGCCACTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGA‑CGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCG > NC_002947/980615‑980907 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |