| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 980,818 | C→G | 5.9% | T87R (ACG→AGG) | hscB → | DnaJ‑like molecular chaperone |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 980,818 | 0 | C | G | 5.9% | 328.8 / 7.3 | 101 | T87R (ACG→AGG) | hscB | DnaJ‑like molecular chaperone |
| Reads supporting (aligned to +/- strand): ref base C (48/47); new base G (3/3); total (51/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.01e-01 | |||||||||||
Only 100 of 102 total aligned reads displayed.
CTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACGCTGAATGAGGACTTTGCCGGC > NC_002947/980672‑980966 | cTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACgg > 4:202633/1‑149 (MQ=255) tttGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAAGTCAGGGt > 1:304701/1‑149 (MQ=255) tGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTc < 2:324392/148‑1 (MQ=255) cGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACg > 7:242030/1‑149 (MQ=255) cGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGAcc < 3:184932/149‑1 (MQ=255) gCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGAccc > 2:271121/1‑149 (MQ=255) gCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGAcc > 6:162689/1‑148 (MQ=255) ccTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCt > 1:68251/1‑149 (MQ=255) cGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGa < 8:261441/147‑1 (MQ=255) cGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACt > 6:254415/1‑149 (MQ=255) gAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTc < 3:204113/135‑1 (MQ=255) gAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTc > 4:204113/1‑135 (MQ=255) aGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTc < 3:45099/149‑1 (MQ=255) gTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCctg > 2:115056/1‑149 (MQ=255) ttatcagcGTATTTCGCTGTAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAAGTCAGGGTCGTGGACCGTGACCTCctg < 2:304701/144‑1 (MQ=255) tGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAAGTCAGGGTCGTGGACCGTGACCTCctgg < 4:98558/149‑2 (MQ=255) gAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCctgct > 7:289428/1‑149 (MQ=255) agcagcGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCctgct < 8:289428/148‑1 (MQ=255) cagcGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCctgctg > 3:269799/1‑147 (MQ=255) cagcGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTgca < 1:82632/149‑1 (MQ=255) agcGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTgcag < 4:269799/149‑1 (MQ=255) cGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTgcagca < 5:254415/149‑1 (MQ=255) cgcTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAg > 7:127558/1‑149 (MQ=255) gcTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGt > 7:12515/1‑149 (MQ=255) gAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGGAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGc < 1:115056/148‑1 (MQ=255) gAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGCCTTCCTGCTGCAGCAGATGCAGTGGCg > 7:311374/1‑149 (MQ=255) gAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGc < 5:191582/148‑1 (MQ=255) gAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCg > 3:264918/1‑149 (MQ=255) gAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTAGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTgcagc < 1:46899/136‑1 (MQ=255) gAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTAGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTgcagc > 2:46899/1‑136 (MQ=255) gAAAAATCCGCCGCCCTCAACGAAGCTTACCAGCCGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACGTAT‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGc < 1:267168/149‑1 (MQ=255) aaaaaTCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTAGCTGCTGGCCATCAGCGGCGACG‑AA‑GTGCCCCAGGAGGTGACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGt < 1:244102/149‑1 (MQ=255) aaTCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGaa < 5:145904/149‑1 (MQ=255) tCCGCGGCCCTCAACGAGGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCCCGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAaga > 5:342917/1‑149 (MQ=255) tCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGaa > 5:107883/1‑147 (MQ=255) tCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGAGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGAGATCCTGCTGGAGCAGATGCAGTGGCGTGaa > 7:138000/1‑147 (MQ=255) ccGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAagag > 1:80130/1‑149 (MQ=255) cgcgGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AACTTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAagag < 1:271121/149‑1 (MQ=255) cgcgGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAagag < 5:162689/148‑1 (MQ=255) cTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCgaaga < 2:139542/149‑1 (MQ=255) tCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCgaaga > 4:201640/1‑148 (MQ=255) cAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCt > 4:223715/1‑141 (MQ=255) cAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCt < 3:223715/141‑1 (MQ=255) aaCGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACT‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACt < 8:301636/149‑1 (MQ=255) aaCGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAAc < 2:68251/148‑1 (MQ=255) cgacgCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTg > 3:121144/1‑148 (MQ=255) cgCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAgg < 3:201640/149‑1 (MQ=255) ttACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGAt > 7:28386/1‑148 (MQ=255) ttACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGAt > 2:99920/1‑148 (MQ=255) ccAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTgcagc > 7:76618/1‑107 (MQ=255) ccAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAg < 2:80130/149‑1 (MQ=255) ccAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAg > 4:274834/1‑149 (MQ=255) cAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGc > 1:46378/1‑149 (MQ=255) cAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGc > 4:233883/1‑149 (MQ=255) gACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCg < 8:242030/149‑1 (MQ=255) gACGCGGCGCACTGCGCAGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAg > 8:186352/1‑146 (MQ=255) gACGCGGCGCACTGCGCAGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAg < 7:186352/146‑1 (MQ=255) gACGCGGCGCACTGCGCAGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGcc > 8:46471/1‑148 (MQ=255) aCGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGa > 1:296019/1‑149 (MQ=255) tGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCtt > 1:304768/1‑149 (MQ=255) cgcAGTGCGCCGCGTCGCGCGCGCTACCTGCTGCCCATCAGCGGCCACG‑AA‑GTGCCCCAGCAGGTCACGGTCCACGACCCTGACGTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGATCTGCAGGATGAAGCCGACCtt > 3:273221/1‑147 (MQ=255) gcAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGAc < 1:196914/149‑1 (MQ=255) cgccgcGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTTGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTc > 3:241274/1‑149 (MQ=255) cgccgcGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTc > 1:3065/1‑149 (MQ=255) gccgcGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCg > 4:38233/1‑149 (MQ=255) gcgcgcgcTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATg > 7:104584/1‑120 (MQ=255) gcgcgcgcTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATg < 8:104584/120‑1 (MQ=255) gcgcgcgcTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGtt < 3:131488/148‑1 (MQ=255) gcgcgcTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCaa < 1:99920/149‑1 (MQ=255) cgcgcTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCaag < 4:264918/149‑1 (MQ=255) gcTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTTGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCaagaag < 4:241274/149‑1 (MQ=255) ccTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAgcgc < 2:46378/148‑1 (MQ=255) ctgctgGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCt < 2:304768/149‑1 (MQ=255) ctgGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGaa < 3:274834/149‑1 (MQ=255) ccATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGgcc < 4:121144/149‑1 (MQ=255) cATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGgccg > 3:217542/1‑149 (MQ=255) tCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGaa > 6:183514/1‑142 (MQ=255) tCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGaa < 5:183514/142‑1 (MQ=255) ccACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCaag > 8:314293/1‑124 (MQ=255) ccACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCaag < 7:314293/124‑1 (MQ=255) cACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGacac > 2:273646/1‑149 (MQ=255) cG‑AA‑GTGCGCCAGTTGGTCACGGTCGACGACCCTGACTTCCTGCTGCAGCAGATGCAGTTGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGTAGCGCCTGTAGGCCGCCCAGGACACGc < 8:138000/149‑1 (MQ=255) cG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACGc < 8:276568/149‑1 (MQ=255) g‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACGCt > 4:273372/1‑149 (MQ=255) g‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACGCt < 8:127558/149‑1 (MQ=255) g‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACGCt < 3:202633/149‑1 (MQ=255) g‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACGCt < 4:217542/149‑1 (MQ=255) gTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACGCTGaa > 3:211729/1‑149 (MQ=255) ctgcagcAGGAAGTCAGGGTCGTGGACCGTGACCTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACGCTGaa > 8:102097/7‑149 (MQ=38) tgcagcAGGAAGTCAGGGTCGTGGACCGTGACCTCCTGGGGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACGCTGAAt > 2:20389/6‑149 (MQ=37) tGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACGCTGAAt < 3:233883/149‑1 (MQ=255) cagcAGGAAGTCAGGGTCGTGGACCGTGACCTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACGCTGAATGa < 7:102097/146‑1 (MQ=38) cccAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCTCCTGAATGCCTCCCAGGACACGCTGAATGAg > 8:292150/1‑149 (MQ=255) cccAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACGCTGAATGAg < 1:273646/149‑1 (MQ=255) aggaggTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGATGGCCGCCCAGGACACGCTGAGTGacgcc > 4:46973/1‑145 (MQ=255) aggaggTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACGCTGAATGAGGAc > 8:100692/1‑149 (MQ=255) aCGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGa < 2:306891/125‑1 (MQ=255) aCGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGa > 1:306891/1‑125 (MQ=255) aCGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACGCTGAATGAGGACTTTGCCg < 2:3065/148‑1 (MQ=255) cGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACGCTGAATGAGGACTTTGCCGgc > 3:67622/1‑149 (MQ=255) | CTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGCCACG‑AA‑GTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACGCTGAATGAGGACTTTGCCGGC > NC_002947/980672‑980966 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |