| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,132,859 | A→G | 5.9% | intergenic (‑243/‑29) | PP_0993 ← / → PP_0994 | hypothetical protein/RNA polymerase sigma factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,132,859 | 0 | A | G | 5.9% | 203.5 / 2.2 | 68 | intergenic (‑243/‑29) | PP_0993/PP_0994 | hypothetical protein/RNA polymerase sigma factor |
| Reads supporting (aligned to +/- strand): ref base A (34/30); new base G (2/2); total (36/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.79e-01 | |||||||||||
TTTCAGGGCGAGTCTTCACGACCTGATGTTGAAGCCAAGGGCATGGCATATTTGCAGCACCTGCGTGCCACACGGCGGGAGCGGATGAATCAAGTCAATTGTATTCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGCTTCAGGGGCTGACAGGCGACCAGCTGGCCTATCAGGATTTTCTTGGCACGCTTGCGCTGCATGTACGTGCGTTTCTGCGCAGCCGTCTGAGCAGGCGCCCGGCC > NC_002947/1132713‑1133007 | tttCAGGGCGAGTCTTCACGACCTGATGTTGAAGCCAAGGGCATGGCATATTTGCAGCACCTGCGTGCCACACGGCGGGAGCGGATGAATCAAGTCAATTGTATTCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACAg < 8:48566/148‑1 (MQ=255) aGGGCGAGTCTTCACGACCTGATGTTGAAGCCAAGGGCATGGCATATTTGCAGCACCTGCGTGCCACACGGCGGGAGCGGATGAATCAAGTCAATTGTATTCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACAGGAt > 6:336849/1‑147 (MQ=255) aGGGCGAGTCTTCACGACCTGATGTTGAAGCCAAGGGCATGGCATATTTGCAGCACCTGCGTGCCACACGGCGGGAGCGGATGAATCAAGTCAATTGTATTCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACAGGATg < 6:46847/148‑1 (MQ=255) aGGGCGAGTCTTCACGACCTGATGTTGAAGCCAAGGGCATGGCATATTTGCAGCACCTGCGTGCCACACGGCGGGAGCGGATGAATCAAGTCAATTGTATTCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACAGGATg < 4:168833/148‑1 (MQ=255) aGGGCGAGTCTTCACGACCTGATGTTGAAGCCAAGGGCATGGCATATTTGCAGCACCTGCGTGCCACACGGCGGGAGCGGATGAATCAAGTCAATTGTATTCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACAGGATGa < 5:336849/149‑1 (MQ=255) tgCGAGTCTTCACGACCTGATGTTGAAGCGAAGGGCATGGCATATTTGCAGCACCTGCGTGCCACACGGCGGGAGCGGATGAATCAAGTCAATTGTATTCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACAGGATGAGc < 8:271769/148‑1 (MQ=255) cTGATGTTGAAGCCAAGGGCATGGCATATTTGCAGCACCTGCGTGCCACACGGCGGGAGCGGATGAATCAAGTCAATTGTATTCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGc > 8:291233/1‑149 (MQ=255) tGATGTTGAAGCCAAGGGCATGGCATATTTGCAGCACCTGCGTGCCACACGGCGGGAGCGGATGAATCAAGTCAATTGTATTCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGcc > 3:62505/1‑149 (MQ=255) gATGTTGAAGCCAAGGGCATGGCATATTTGCAGCACCTGCGTGCCACACGGCGGCAGCGCATGAATCAAGTCAATTGTATTCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGcccc > 8:172304/1‑149 (MQ=255) aTGTTGAAGCCAAGGGCATGGCATATTTGCAGCACCTGCGTGCCACACGGCGGGAGCGGATGAATCAAGTCAATTGTATTCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACAGGAt < 2:287212/126‑1 (MQ=255) tGTTGAAGCCAAGGGCATGGCATATTTGCAGCACCTGCGTGCCACACGGCGGGAGCGGATGAATCAAGTCAATTGTATTCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCgg < 5:223912/149‑1 (MQ=255) ttGAAGCCAAGGGCATGGCATATTTGCAGCACCTGCGTGCCACACGGCGGGAGCGGATGAATCAAGTCAATTGTATTCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGt < 3:268938/148‑1 (MQ=255) aGCCAAGGGCATGGCATATTTGCAGCACCTGCGTGCCACACGGCGGGAGCGGATGAATCAAGTCAATTGTATTCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGaaa < 3:219921/149‑1 (MQ=255) gCCAAGGGCATGGCATATTTGCAGCACCTGAGTGCCACACGGCGGGAGCGGATGAATCAAGTCAATTGTATTCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAg > 5:181593/1‑149 (MQ=255) ccAAGGGCATGGCATATTTGCAGCACCTGCGTGCCACACGGCGGGAGCGGATGAATCAAGTCAATTGTATTCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAg > 2:297646/1‑148 (MQ=255) ccAAGGGCATGGCATATTTGCAGCACCTGCGTGCCACACGGCGGGAGCGGATGAATCAAGTCAATTGTATTCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAg > 6:63712/1‑148 (MQ=255) gcatggcatATTTGCAGCACCTGCGTGCCACACGGCGGGAGCGGATGAATCAAGTCAATTGTATTCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTcaca > 1:328286/1‑107 (MQ=255) gcatggcatATTTGCAGCACCTGCGTGCCACACGGCGGGAGCGGATGAATCAAGTCAATTGTATTCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTcaca < 2:328286/107‑1 (MQ=255) gcatggcatATTTGCAGCACCTGCGTGCCACACGGCGGGAGCGGATGAATCAAGTCAATTGTATTCAGGGTGTAACCCAGGCGACCAATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGtt < 2:82032/149‑1 (MQ=255) atggcatATTTGCAGCACCTGCGTGCCACACGGCGGGAGCGGATGAATCAAGTCAATTGTATTCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGc < 7:186357/149‑1 (MQ=255) ggcatATTTGCAGCACCTGCGTGCCACACGGCGGGAGCGGATGAATCAAGTCAATTGTATTCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGt < 6:340508/144‑1 (MQ=255) ggcatATTTGCAGCACCTGCGTGCCACACGGCGGGAGCGGATGAATCAAGTCAATTGTATTCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGt > 5:340508/1‑144 (MQ=255) gcatATTTGCAGCACCTGCGTGCCACACGGCGGGAGCGGATGAATCAAGTCAATTGTATTCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGaaa > 2:258643/1‑136 (MQ=255) gcatATTTGCAGCACCTGCGTGCCACACGGCGGGAGCGGATGAATCAAGTCAATTGTATTCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGCtt > 1:333325/1‑148 (MQ=255) gcatATTTGCAGCACCTGCGTGCCACACGGCGGGAGCGGATGAATCAAGTCAATTGTATTCAGGGTGTAACCCAGGCGACCCAAGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGaaa < 1:258643/136‑1 (MQ=255) atatTTGCAGCACCTGCGTGCCACACGGCGGGAGCGGATGAATCAAGTCAATTGTATTCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGCTTCAg > 7:311156/1‑149 (MQ=255) tttGCAGCACCTGCGTGCCACACGGCGGGAGCGGATGAATCAAGTCAATTGTATTCAGGGTGTAACCCAGGCGCCCCATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGCTTCAgggg > 7:240856/1‑149 (MQ=255) gcaCCTGCGTGCCACACGGCGGGAGCGGATGAATCAAGTCAATTGTATTCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACGGGATGAGCTCGAGACTCGCGAGGcc > 5:150261/1‑116 (MQ=255) gcaCCTGCGTGCCACACGGCGGGAGCGGATGAATCAAGTCAATTGTATTCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACGGGATGAGCTCGAGACTCGCGAGGcc > 5:155187/1‑116 (MQ=255) gcaCCTGCGTGCCACACGGCGGGAGCGGATGAATCAAGTCAATTGTATTCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACGGGATGAGCTCGAGACTCGCGAGGcc < 6:150261/116‑1 (MQ=255) gcaCCTGCGTGCCACACGGCGGGAGCGGATGAATCAAGTCAATTGTATTCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACGGGATGAGCTCGAGACTCGCGAGGcc < 6:155187/116‑1 (MQ=255) cTGCGTGCCACACGGCGGGAGCGGATGAATCAAGTCAATTGTATTCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGCTTCAGGGGCTGACAGGCg < 7:291233/149‑1 (MQ=255) gCCACACGGCGGGAGCGGATGAATCAAGTCAATTGTATTCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCgg < 1:163/109‑1 (MQ=255) gCCACACGGCGGGAGCGGATGAATCAAGTCAATTGTATTCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCgg > 2:163/1‑109 (MQ=255) ggcggGAGCGGATGAATCAAGTCAATTGTATTCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGCTTCAGGGGCTGACAGGCGACCAGCTGGCCTa > 1:215055/1‑149 (MQ=255) gCGGATGAATCAAGTCATTTGTATTCAGGGTGTACCGGAGGCGACCCATGCAGCGAAGTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGCTTCAGGGGCTGACAGGCGACCAGCTGGCCTATCAGGAt < 6:126507/149‑1 (MQ=255) gCGGATGAATCAAGTCAATTGTATTCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGCTTCAGGGGCTGACAGGCGACCAGCTGGCCTATCAGGAt > 1:206180/1‑149 (MQ=255) ggATGAATCAAGTCAATTGTATTCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGCTTCAGGGGCTGACAGGCGACCAGCTGGCCTATCAGGAttt > 5:182458/1‑149 (MQ=255) gATGAATCAAGTCAATTGTATTCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGCTTCAGGGGCTGACAGGCGACCAGCTGGCCTATCAGGAtttt > 1:1205/1‑149 (MQ=255) aaTCAAGTCAATTGTATTCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGCTTCAGGGGCTGACAGGCGACCAGCTGGCCTATCAGGATTTTCTTg > 8:111648/1‑149 (MQ=255) tCAAGTCAATTGTATTCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGCTTCAGGGGCTGACAGGCGACCAGCTGGCCTATCAGGATTTTCTTGGc < 4:62505/149‑1 (MQ=255) ttGTATTCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGCTTCAGGGGCTGACAGGCGACCAGCTGGCCTATCAGGATTTTCTTGGCACGCTTgcg > 7:301307/1‑149 (MQ=255) ttGTATTCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGCTTCAGGGGCTGACAGGCGACCAGCTGGCCTATCAGGATTTTCTTGGCACGCTTgcg > 2:274882/1‑149 (MQ=255) aTTCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACAGGATGAGCTCGAGACTCGCGAGGCCCGGTTGAAAGCACTGTTGCTTCAGGGGCTGACAGGCGACCAGCTGGCCTATCAGGATTTTCTTGGCACGCTTGCGCTg > 3:135219/1‑148 (MQ=255) ttCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGCTTCAGGGGCTGACAGGCGACCAGCTGGCCTATCAGGATTTTCTTGGCACGCTTGCGCTGc < 2:1205/148‑1 (MQ=255) ttCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGCTTCAGGGGCTGACAGGCGACCAGCTGGCCTATCAGGATTTTCTTGGCACGCTTGCGCTGc < 8:240856/148‑1 (MQ=255) ttCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCCAGGCCCGGTTGAAAGCACTGTTGCTTCAGGGGCTGACAGGCGACCAGCTGGCCTATCAGGATTATCATGGCACGCTTGCGCTGCa > 8:313989/1‑149 (MQ=255) tCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGCTTCAGGGGCTGACAGGCGACCAGCTGGCCTATCAGGATTTTCTTGGCACGCTTGCGCTGCAt > 5:78901/1‑149 (MQ=255) ggTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGCTTCAGGGGCTGACAGGCGACCAGCTGGCCTATCAGGATTTTCTTGGCACGCTTGCGCTGCATGTAc < 5:63712/149‑1 (MQ=255) ccAGGCGACCCATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGCTTCAGGGGCTGACAGGCGACCAGCTGGCCTATCAGGATTTTCTTGGCACGCTTGCGCTGCATGTACGTGCGttt > 7:72131/1‑149 (MQ=255) ccAGGCGACCCATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGCTTCAGGGGCTGACAGGCGACCAGCTGGCCTATCAGGATTTTCTTGGCACGCTTGCGCTGCATGTACGTGCGtt > 3:304467/1‑148 (MQ=255) ccAGGCGACCCATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGCTTCAGGGGCTGACAGGCGACCAGCTGGCCTATCAGGATTTTCTTGGCACGCTTGCGCGGCATGTACGTGCGtt > 6:143474/1‑148 (MQ=255) aGGCGACCCATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGCTTCAGGGGCTGACAGGCGACCAGCTGGCCTATCAGGATTTTCTTGGCACGCTTGCGCTGccaag > 1:83158/1‑133 (MQ=255) aGGCGACCCATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGCTTCAGGGGCTGACAGGCGACCAGCTGGCCTATCAGGATTTTCTTGGCACGCTTGCGCTGccaag < 2:83158/137‑5 (MQ=255) gCGACCCATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGCTTCAGGGGCTGACAGGCGACCAGCTGGCCTATCAGGATTTTCTTGGCACGCTTGCGCTGCATGTACGTGCGTTTCTgc > 1:82360/1‑149 (MQ=255) cccATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGCTTCAGGGGCTGACAGGCGACCAGCTGGCCTATCAGGATTTTCtt < 5:101064/111‑1 (MQ=255) cccATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGCTTCAGGGGCTGACAGGCGACCAGCTGGCCTATCAGGATTTTCtt > 6:101064/1‑111 (MQ=255) cATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGCTTCAGGGGCTGACAGGCGACCAGCTGGCCTATCAGGATTTTCTTGGCACGCTTGCGCTGCATGTACGTGCGTTTCTGCGCAGcc < 2:82360/149‑1 (MQ=255) aTGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGCTTCAGGGGCTGACAGGCGACCAGCTGGCCTATCAGGATTTTCTTGGCACGCTTGCGCTGCATGTACGTGCGTTTCTGCGCAGCCg > 8:181879/1‑149 (MQ=255) cAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGCTTCAGGGGCTGACAGGCGACCAGCTGGCCTATCAGGATTTTCTTGGCACGCTTGCGCTGCATGTACGTGCGTTTCTGCGCAGCCGTCt < 2:333325/149‑1 (MQ=255) gCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGCTTCAGGGGCTGACAGGCGACCAGCTGGCCTATCAGGATTTTCTTGGCACGCTTGCGCTGCATGTACGTGCGTTTCTGCGCAGCCGTCTGa < 6:78901/149‑1 (MQ=255) gAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGCTTCAGGGGCTGACAGGCGACCAGCTGGCCTATCAGGATTTTCTTGGCACGCTTGCGCTGCATGTACGTGCGTTTCTGCGCAGCCGTCTGAGc < 7:111648/149‑1 (MQ=255) gAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGCTTCAGGGGCTGACAGGCGACCAGCTGGCCTATCAGGATTTTCTTGGCACGCTTGCGCTGCATGTACGTGCGTTTCTGCGCAGCCGTCTGAGc < 8:301307/149‑1 (MQ=255) aactaactCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGCTTCAGGGGCTGACAGGCGACCAGCTGGCCTATCAGGATTTTCTTGGCACGCTTGCGCTGCATGTACGTGCGTTTCTGCGCAGCCGTCTGAGCa < 6:182458/149‑1 (MQ=255) aactCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGCTTCAGGGGCTGACAGGCGACCAGCTGGCCTATCAGGATTTTCTTGGCACGCTTGCGCTGCATGTACGTGCGTTTCTGCGCAGCCGTCTGAGCAGgcg > 7:108708/1‑149 (MQ=255) actCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGCTTCAGGGGCTGACAGGCGACCAGCTGGCCTATCAGGATTTTCTTGGCACGCTTGCGCTGCATGTACGTGCGTTTCTGCTCAGACGGCTGCGCAgaaac < 1:274882/149‑5 (MQ=255) actCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGCTTCAGGGGCTGACAGGCGACCAGCTGGCCTATCAGGATTTTCTTGGCACGCTTGCGCTGCATGTACGTGCGTTTCTGCGCAGCCGTCTGAGCAGgcgc < 1:297646/149‑1 (MQ=255) ctCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGCTTCAGGGGCTGACAGGCGACCAGCTGGCCTATCAGGATTTTCTTGGCACGCTTGCGCTGCATGTACGTGCGTTTCTGCGCAGCCGTCTGAGCAGGCGcc > 7:27027/1‑149 (MQ=255) tCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGCTTCAGGGGCTGACAGGCGACCAGCTGGCCTATCAGGATTTTCTTGGCACGCTTGCGCTGCATGTACGTGCGTTTCTGCGCAGCCGTCTGAGCAGGCGccc > 5:174346/1‑149 (MQ=255) tCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGCTTCAGGGGCTGACAGGCGACCAGCTGGCCTATCAGGATTTTCTTGGCACGCTTGCGCTGCATGTACGTGCGTTTCTGCGCAGCCGTCTGAGCAGGCGccc > 1:9474/1‑149 (MQ=255) aGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGCTTCAGGGGCTGACAGGCGACCAGCTGGCCTATCAGGATTTTCTTGGCACGCTTGCGCTGCATGTACGTGCGTTTCTGCGCAGCCGTCTGAGCAGGCGCCCGGcc > 2:125663/1‑149 (MQ=255) aGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGCTTCAGGGGCTGACAGGCGACCAGCTGGCCTATCAGGATTTTCTTGGCACGCTTGCGCTGCATGTACGTGCGTTTCTGCGCAGCCATCTGAGCAGGCGCCCGGcc > 1:185671/1‑149 (MQ=255) | TTTCAGGGCGAGTCTTCACGACCTGATGTTGAAGCCAAGGGCATGGCATATTTGCAGCACCTGCGTGCCACACGGCGGGAGCGGATGAATCAAGTCAATTGTATTCAGGGTGTAACCCAGGCGACCCATGCAGCGAACTAACTCACAGGATGAGCTCGAGGCTCGCGAGGCCCGGTTGAAAGCACTGTTGCTTCAGGGGCTGACAGGCGACCAGCTGGCCTATCAGGATTTTCTTGGCACGCTTGCGCTGCATGTACGTGCGTTTCTGCGCAGCCGTCTGAGCAGGCGCCCGGCC > NC_002947/1132713‑1133007 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |