Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,238,189 G→A 6.8% V279V (GTC→GTT argF ← ornithine carbamoyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,238,1890GA 6.8% 167.7 / 2.6 59V279V (GTC→GTTargFornithine carbamoyltransferase
Reads supporting (aligned to +/- strand):  ref base G (30/25);  new base A (2/2);  total (32/27)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.50e-01

GATGCGCTGGTCGCCATAGCCGCAGGCGAGGTTGCGCAGGTTGAGCAGTAGGGGTTGACTCATGCGTGGTGGTAAGCCGGTTCTACAAGGAATTCGAGAAGCGCCTTCTGTGCATGCAGGCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGGGCAGGCAGTGCATGAAGAGGACATCGGGTGCAGCCAGGTCGAGCAGTTCGCGGGTGACCTGGTAAGGCGCGAAATGCGCCAGGCGCCGTGCA  >  NC_002947/1238046‑1238336
                                                                                                                                                |                                                                                                                                                    
gATGCGCTGGTCGCCATAGCCGCAGGCGAGGTTGCGCAGGTTGAGCAGTAGGGGTTGACTCATGCGTGGTGGTAAGCCGGTTCTACAAGGAATTCGAGAAGCGCCTTCTGTGCATGCAGGCGGTTTTCAGCCTCGTCCCAGGCGACCg                                                                                                                                                  >  7:11434/1‑148 (MQ=255)
     gcTGGTCGCCATAGCCGCAGGCGAGGTTGCGCAGGTTGAGCAGTAGGGGTTGACTCATGCGTGGTGGTAAGCCGGTTCTACAAGGAATTCGAGAAGCGCCTTCTGTGCATGCAGGCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTg                                                                                                                                            >  4:319873/1‑149 (MQ=255)
         gTCGCCATAGCCGCAGGCGAGGTTGCGCAGGTTGAGCAGTAGGGGTTGACTCATGCGTGGTGGTAAGCCGGTTCTACAAGGAATTCGAGAAGCGCCTTCTGTGCATGCAGGCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTggg                                                                                                                                          <  6:149949/147‑1 (MQ=255)
          tCGCCATAGCCACAGGCGAGGTTGCGCAGGTTGAGCAGTAGGGGTTGACTCATGCGTGGTGGTAAGCCGGTTCTACAAGGAATTCGAGAAGCGCCTTCTGTGCATGCAGGCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTGGgtcg                                                                                                                                       <  2:40227/149‑1 (MQ=255)
              cATAGCCGCAGGCGAGGTTGCGCAGGTTGAGCAGTAGGGGTTGACTCATGCGTGGTGGTAAGCCGGTTCTACAAGGAATTCGAGAAGCGCCTTCTGTGCATGCAGGCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTGGgtcgtc                                                                                                                                     >  2:189835/1‑147 (MQ=255)
               aTAGCCGCAGGCGAGGTTGCGCAGGTTGAGCAGTAGGGGTTGACTCATGCGTGGTGGTAAGCCGGTTCTACAAGGAATTCGAGAAGCGCCTTCTGTGCATGCAGGCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAg                                                                                                                                  >  3:218375/1‑149 (MQ=255)
                    cGCAGGCGAGGTTGCGCAGGTTGAGCAGTAGGGGTTGACTCATGCGTGGTGGTAAGCCGGTTCTACAAGGAATTCGAGAAGCGCCTTCTGTGCATGCAGGCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGt                                                                                                                             >  3:58256/1‑149 (MQ=255)
                         gCGAGGTTGCGCAGGTTGAGCAGTAGGGGTTGACTCATGCGTGGTGGTAAGCCGGTTCTACAAGGAATTCGAGAAGCGCCTTCTGTGCATGCAGGCGGTTTTCAGCCTCGTCCCAGGCAAc                                                                                                                                                    <  1:55680/121‑1 (MQ=255)
                         gCGAGGTTGCGCAGGTTGAGCAGTAGGGGTTGACTCATGCGTGGTGGTAAGCCGGTTCTACAAGGAATTCGAGAAGCGCCTTCTGTGCATGCAGGCGGTTTTCAGCCTCGTCCCAGGCAAc                                                                                                                                                    >  2:55680/1‑121 (MQ=255)
                              gTTGCGCAGGTTGAGCAGTAGGGGTTGACTCATGCGTGGTGGTAAGCCGGTTCTACAAGGAATTCGAGAAGCGCCTTCTGTGCATGCAGGCGGATTTCAGCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGCTCCAGGCTGaa                                                                                                                   >  6:257788/1‑148 (MQ=255)
                                   gcAGGTTGAGCAGTAGGGGTTGACTCATGCGTGGTGGTAAGCCGGTTCTACAAGGAATTCGAGAAGCGCCTTCTGTGCATGCAGGCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCt                                                                                                              >  7:268792/1‑149 (MQ=255)
                                   gcAGGTTGAGCAGTAGGGGTTGACTCATGCGTGGTGGTAAGCCGGTTCTACAAGGAATTCGAGAAGCGCCTTCTGAGCATGCAGGCGGTTTTCCTGTTACGTCCCAGGCGCCCGAACGTGGGTCGTAGAGCAGGTCCTGGCTGATTTcc                                                                                                               >  1:110885/1‑149 (MQ=255)
                                               gTAGGGGTTGACTCATGCGTGGTGGTAAGCCGGTTCTACAAGGAATTCGAGAAGCGCCTTCTGTGCATGCAGGCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTggg                                                                                                  >  8:20924/1‑149 (MQ=255)
                                                tAGGGGTTGACTCATGCGTGGTGGTAAGCCGGTTCTACAAGGACTTCGAGAAGCGCCTTCTGTGCATGCAGGCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTgggc                                                                                                 >  1:162993/1‑149 (MQ=255)
                                                 aGGGGTTGACTCATGCGTGGTGGTAAGCCGGTTCTACAAGGAATTCGAGAAGCGCCTTCTGTGCATGCAGGCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTgggc                                                                                                 <  2:330375/148‑1 (MQ=255)
                                                    ggTTGACTCATGCGTGGTGGTAAGCCGGTTCTACAAGGAATTCGAGAAGCGCCTTCTGTGCATGCAGGCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTCGCTGATTTCCTCGCCACGGTgggcgggc                                                                                             <  1:189835/149‑1 (MQ=255)
                                                         aCTCATGCGTGGTGGTAAGCCGGTTCTACAAGGAATTCGAGAAGCGCCTTCTGTGCATGCAGGCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGggcaggca                                                                                        <  8:159892/149‑1 (MQ=255)
                                                                cGTGGTGGTAAGCCGGTTCTACAAGGAATTCGAGAAGCGCCTTCTGTGCATGCAGGCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGGGCAGGCAGTGCAt                                                                                  <  3:107921/148‑1 (MQ=255)
                                                                    gtggtAAGCCGGTTCTACAAGGAATTCGAGAAGCGCCTTCTGTGCATGCAGGCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGGGCAGGCAGTGCATGaa                                                                               >  8:31404/1‑147 (MQ=255)
                                                                    gtggtAAGCCGGTTCTACAAGGAATTCGAGAAGCGCCTTCTGTGCATGCAGGCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGGGCAGGCAGTGCATGAaga                                                                            <  4:218375/149‑1 (MQ=255)
                                                                             cGGTTCTACAAGGAATTCGAGAAGCGCCTTCTGTGCATGCAGGCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGGGCAGGCAGTGCATGAAGAGGAGATCgg                                                                   <  5:257788/149‑1 (MQ=255)
                                                                              ggTTCTACAAGGAATTCGAGAAGCGCCTTCTGTGCATGCAGGCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGGGCAGGCAGTGCATGAAGAGGACATCggg                                                                  >  4:84106/1‑149 (MQ=255)
                                                                               gTTCTACAAGGAATTCGAGAAGCGCCTTCTGTGCATGCAGGCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGGGCAGGCAGTGCATGAAGAGGACATCGGGt                                                                 <  1:116220/149‑1 (MQ=255)
                                                                               gTTCTACAAGGAATTCGAGAAGCGCCTTCTGTGCATGCAGGCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGGGCAGGCAGTGCATGAAGAGGACATCGGGt                                                                 >  4:6481/1‑149 (MQ=255)
                                                                               cttCTACAAGCAATTCGAGAAGCGCCTTCTGTGCATGCAGGCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTGGGTCGGCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGGGCAGGCAGTGCATGAAGAGGACATCGGGt                                                                 >  8:183575/2‑149 (MQ=255)
                                                                                    aCAAGGAATTAGAGAAGCGCCTTATGAGCATGCAGGCGGTTTTCAGCCTCGTCACAGGCGCCCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACCTTGGGCGGGCAGGCAGTGCATGAAGAGGACATCGGGTCCAga                                                            >  6:320363/1‑148 (MQ=255)
                                                                                      aaGGAATTCGAGAAGCGCCTTCTGTGCATGCAGGCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGGGCAGGCAGTGCATGAAGAGGACATCGGGTGCAGc                                                            >  1:203002/1‑147 (MQ=255)
                                                                                        ggAATTCGAGAAGCGCCTTCTGTGCATGCAGGCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGGGCAGGCAGTGCATGAAGAGGACATCGGGTGCAGCCAgg                                                        >  7:96626/1‑149 (MQ=255)
                                                                                         gAATTCGAGAAGCGCCTTCTGTGCATGCAGGCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGGGCAGGCAGTGCATGAAGAGGACATCGGGTGCAGCCAGGt                                                       <  3:319873/149‑1 (MQ=255)
                                                                                          aaTTCGAGAAGCGCCTTCTGTGCATGCAGGCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGGGCAGGCAGTGCATGAAGAGGACATCGGGTGCAGCCAGGTc                                                      <  8:11434/149‑1 (MQ=255)
                                                                                          aaTTCGAGAAGCGCCTTCTGTGCATGCAGGCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGGGCAGGCAGTGCATGAAGAGGACATCGGGTGCAGCCAGGTc                                                      <  7:183575/149‑1 (MQ=255)
                                                                                          aaTTCGAGAAGCGCCTTCTGTGCATGCAGGCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGGGCAGGCAGTGCATGAAGAGGACATCGGGTGCAGCCAGGTc                                                      <  2:203002/149‑1 (MQ=255)
                                                                                            ttCGAGAAGCGCCTTCTGTGCATGCAGGCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGGGCAGGCAGTGCATGAAGAGGACATCGGGTGCAGCCAGGTc                                                      >  3:53416/1‑147 (MQ=255)
                                                                                            ttCGAGAAGCGCCTTCTGTGCATGCAGGCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGGGCAGGCAGTGCATGAAGAGGACATCGGGTGCAGCCAGGTCGa                                                    <  4:58256/149‑1 (MQ=255)
                                                                                               gagaAGCGCCTTCTGTGCATGCAGGCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGGGCAGGCAGTGCATGAAGAAGGACATCGGGTGCAGCCAGGTCGAg                                                   <  1:4500/148‑1 (MQ=255)
                                                                                                  aaGCGCCTTCTGTGCATGCAGGCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGGGCAGGCAGTGCATGAAGAGGACATCGGGTGCAGCCAGGTCGAGCAGtt                                              >  7:152561/1‑149 (MQ=255)
                                                                                                         ttCTGTGCATGCAGGCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGGGCAGGCAGTGCATGAAGAGGACATCGGGTGCAGCCAGGTCGAGCAGTTCGCGGGt                                       >  6:339221/1‑149 (MQ=255)
                                                                                                              tgcatgcaGGCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTGGTGCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGGGCAGGCAGTGCATGAAGAGGACATCGGGTGCAGCCAGGTCGAGCAGTTCGCGGGTGAcc                                   <  5:320363/148‑1 (MQ=255)
                                                                                                              tgcatgcaGGCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGGGCAGGCAGTGCATGAAGAGGACATCGGGTGCAGCCAGGTCGAGCAGTTCGCGGGTGAcc                                   <  3:133742/148‑1 (MQ=255)
                                                                                                              tgcatgcaGGCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGGGCAGGCAGTGCATGAAGAGGACATCGGGTGCAGCCAGGTCGAGCAGTTCGCGGGTGACCt                                  >  4:150744/1‑149 (MQ=255)
                                                                                                              tgcatgcaGGCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGGGCAGGCAGTGCATGAAGAGGACATCGGGTGCAGCCAGGTCGAGCAGTTCGCGGGTGACCt                                  >  2:233822/1‑149 (MQ=255)
                                                                                                                catgcaGGCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTTGGCGGGCAGGCAGTGCATGAAGAGGACATCGGGTGCAGCCAGGTCGAGCAGTTCGCGGGTGACCTg                                 <  3:6481/148‑1 (MQ=255)
                                                                                                                catgcaGGCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGGGCAGGCAGTGCATGAAGAGGACATCGGGTGCAGCCAGGTCGAGCAGTTCGCGGGTGACCTg                                 <  3:84106/148‑1 (MQ=255)
                                                                                                                 atgcaGGCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGGGCAGGCAGTGCATGAAGAGGACATCGGGTGCAGCCAGGTCGAGCAGTTCGCGGGTGACCTGGt                               <  8:96626/149‑1 (MQ=255)
                                                                                                                 atgcaGGCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGGGCAGGCAGTGCATGAAGAGGACATCGGGTGCAGCCAGGTCGAGCAGTTCGCGGGTGACCTGGt                               <  1:233822/149‑1 (MQ=255)
                                                                                                                    caGGCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGGGCAGGCAGTGCATGAAGAGGACATCGGGTGCAGCCAGGTCGAGCAGTTCGCGGGTGACCTGGTaa                             <  8:268792/148‑1 (MQ=255)
                                                                                                                       gCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGGGCAGGCAGTGCATGAAGAGGACATCGGGTGCAGCCAGGTCGAGCAGTTCGCGGGTGACCTGGTAAGgcg                         >  1:323224/1‑149 (MQ=255)
                                                                                                                          gTTTTCAGCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGGGCAGGCAGTGCATGAAGAGGACATCGGGTGCAGCCAGGTCGAGCAGTTCGCGGGTGACCTGGTAAGGcgcg                       >  8:72012/1‑148 (MQ=255)
                                                                                                                             ttCAGCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGGGCAGGCAGTGCATGAAGAGGACATCGGGTGCAGCCAGGTCGAGCAGTTCGCGGGTGACCTGGTAAGGCGCGAAAt                   >  5:65191/1‑149 (MQ=255)
                                                                                                                                 aGCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGGGCAGGCAGTGCATGAAGAGGACATCGGGTGCAGCCAGGTCGAGCAGTTCGCGGGTGACCTGGTAAGGCGCGAAATgcg                >  5:296066/1‑149 (MQ=255)
                                                                                                                                 aGCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGGGCAGGCAGTGCATGAAGAGGACATCGGGTGCAGCCAGGTCGAGCAGTTCGCGGGTGACCTGGTAAGGCGCGAAATgc                 <  4:53416/148‑1 (MQ=255)
                                                                                                                                  gCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGGGCAGGCAGTGCATGAAGAGGACATCGGGTGCAGCCAGGTCGAGCAGTTCGCGGGTGACCTGGTAAGGCGCGAAATgcgc               >  8:24736/1‑149 (MQ=255)
                                                                                                                                   ccTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGGGCAGGCAGTGCATGAAGAGGACATCGGGTGCAGCCAGGTCGAGCAGTTCGCGGGTCACCTGGTAAGGCGCGAAATgcgc               >  4:18437/1‑148 (MQ=255)
                                                                                                                                      cGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGGGCAGGCAGTGCATGAAGAGGACATCGGGTGCAGCCAGGTCGAGCAGTTCGCGGGTGACCTGGTAAGGCGCGAAATGCGCCAgg           >  4:55829/1‑149 (MQ=255)
                                                                                                                                        tCCCAGGCAACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGGGCAGGCAGTGCATGAAGAGGACATCGGGTGCAGCCAGGTCGAGCAGTTCGCGGGTGACCTGGTAAGGCGCGAAATg                  <  3:263320/140‑1 (MQ=255)
                                                                                                                                        tCCCAGGCAACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGGGCAGGCAGTGCATGAAGAGGACATCGGGTGCAGCCAGGTCGAGCAGTTCGCGGGTGACCTGGTAAGGCGCGAAATg                  >  4:263320/1‑140 (MQ=255)
                                                                                                                                            aGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGGGCAGGCAGTGCATGAAGAGGACATCGGGTGCAGCCAGGTCGAGCAGTTCGCGGGTGACCTGGTAAGGCGCGAAATGCGCCAGGCGCCGt     <  5:304976/149‑1 (MQ=255)
                                                                                                                                              gCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGGGCAGGCAGTGCATGAAGAGGACATCGGGTGCAGCCAGGTCGAGCAGTTCGCGGGTGACCTGGTAAGGCGCGAAATGCGCCAGGCGCCGTg    >  3:164060/1‑148 (MQ=255)
                                                                                                                                               cGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGGGCAGGCAGTGCATGAAGAGGACATCGGGTGCAGCCAGGTCGAGCAGTTCGCGGGTGACCTGGTAAGGCGCGAAATGCGCCAGGCGCCGTGCa  <  7:20924/149‑1 (MQ=255)
                                                                                                                                                |                                                                                                                                                    
GATGCGCTGGTCGCCATAGCCGCAGGCGAGGTTGCGCAGGTTGAGCAGTAGGGGTTGACTCATGCGTGGTGGTAAGCCGGTTCTACAAGGAATTCGAGAAGCGCCTTCTGTGCATGCAGGCGGTTTTCAGCCTCGTCCCAGGCGACCGAACGTGGGTCGTCGAGCAGGTCCTGGCTGATTTCCTCGCCACGGTGGGCGGGCAGGCAGTGCATGAAGAGGACATCGGGTGCAGCCAGGTCGAGCAGTTCGCGGGTGACCTGGTAAGGCGCGAAATGCGCCAGGCGCCGTGCA  >  NC_002947/1238046‑1238336

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: