| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,243,739 | T→C | 8.9% | intergenic (+28/+71) | tsaA → / ← rnt | peroxiredoxin/ribonuclease T |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,243,739 | 0 | T | C | 8.9% | 184.1 / 7.9 | 67 | intergenic (+28/+71) | tsaA/rnt | peroxiredoxin/ribonuclease T |
| Reads supporting (aligned to +/- strand): ref base T (29/32); new base C (3/3); total (32/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.17e-01 | |||||||||||
CCACGAAGAGCACGGCGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGACGATGCCGCAGAACAGCTCAGCGGTT > NC_002947/1243597‑1243882 | ccACGAAGAGCACGGCGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGc > 4:160873/1‑149 (MQ=255) cACGAAGAGCACGGCGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGcc > 7:46896/1‑149 (MQ=255) aaGAGCACGGCGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGtt < 6:156388/149‑1 (MQ=255) agagCACGGCGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGttt > 7:116490/1‑149 (MQ=255) agCACGGCGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGttttt < 8:116490/149‑1 (MQ=255) cGGCGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTAt < 1:23118/149‑1 (MQ=255) ggCGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATg > 6:66890/1‑149 (MQ=255) cGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGcc > 3:19242/1‑149 (MQ=255) aGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTc < 7:109461/149‑1 (MQ=255) tgCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCt < 2:142957/143‑1 (MQ=255) tgCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCt > 1:142957/1‑143 (MQ=255) cccTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGc < 2:96040/149‑1 (MQ=255) cccTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGc > 4:277412/1‑149 (MQ=255) tGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCgg > 5:128410/1‑149 (MQ=255) ccAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGc < 8:46896/148‑1 (MQ=255) aaCTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCctc > 7:84780/1‑149 (MQ=255) gAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTcgc > 2:84836/1‑149 (MQ=255) gAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTcgc > 6:51555/1‑149 (MQ=255) gAAAAAAGGCGACAAGGGCAGGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTcg < 4:19242/148‑1 (MQ=255) aaGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGgcg > 6:112197/1‑149 (MQ=255) gCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGgcgcgc < 6:279647/149‑1 (MQ=255) gACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTGTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGccc > 3:35554/1‑149 (MQ=255) aGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGa < 5:51555/149‑1 (MQ=255) aTGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAATGcc > 4:196759/1‑149 (MQ=255) gCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTCCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAATGCCTTTAg > 1:336341/1‑148 (MQ=255) cGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAAGCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAATGCCTTTAGCAGa < 6:207777/148‑1 (MQ=255) cGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTCCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAATGCCTTTAGCAGa < 2:336341/148‑1 (MQ=255) tccTGAAGGCGTTGCTGCCTCCCTGCGCGCGTACGCGGGCATGCTGTACTTGCTGCGTGCATGAAACAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAATGCCTTTAGCAGATc < 4:43573/148‑1 (MQ=255) gCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAAt > 7:200767/1‑135 (MQ=255) gCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAAt < 8:200767/135‑1 (MQ=255) ccTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAATGCCTTTAGCAGATc > 8:171849/1‑148 (MQ=255) cTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAATGCCTTTAg > 7:239476/1‑141 (MQ=255) cTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAATGCCTTTAGCAGAt < 8:239476/146‑1 (MQ=255) cTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAATGCCTTTAGCAGATCaa > 7:300530/1‑149 (MQ=255) cTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAATGCCTTTAGCAGATCa > 4:315478/1‑148 (MQ=255) aaGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAATGCCTTTAGCAGATCAATc > 6:209882/1‑148 (MQ=255) aaGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAATGCCTTTAGCAGATCAATc < 8:96958/148‑1 (MQ=255) aaGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAATGCCTTTAGCAGATCAATc < 5:209882/148‑1 (MQ=255) aaGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAATGCCTTTAGCAGATCAATc < 3:315478/148‑1 (MQ=255) ggCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAATGCCTTTAGCAGATCAATCGtt < 8:84780/149‑1 (MQ=255) ggCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAATGCCTTTAGCAGATCAATCGtt < 3:196759/149‑1 (MQ=255) ggCGCTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAATGCCTTTAGCAGATCAATCGtt < 3:155850/149‑1 (MQ=255) gCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAATGCCTTTAGCAGATCAATCGTTg < 5:112197/149‑1 (MQ=255) tttctgcCTACCTGATCTAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATTAAAAAACCGGCCTTCGTGGCCGTTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAATGCCTTTAGCAGATCAATCGTTGaaa < 3:185189/146‑1 (MQ=255) tgcCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAATGCCTTTAGCAGATCAATCGTTGAAATcgc > 4:70597/1‑149 (MQ=255) gcCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAATGCCTTTAGCAGAt < 4:79112/132‑1 (MQ=255) ccTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAATGCCTTTAGCAGATCAATCGTTGAAATCgcgc < 3:160873/149‑1 (MQ=255) cTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAgcc < 5:66890/149‑1 (MQ=255) aCGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCAtttct > 6:26044/1‑149 (MQ=255) aCGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCAtttct > 5:19616/1‑149 (MQ=255) gCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCAtttctt < 1:84836/149‑1 (MQ=255) gCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCa < 5:26044/148‑1 (MQ=255) cAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCAtttcttt < 4:4696/144‑1 (MQ=255) cAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCAtttcttt > 3:4696/1‑144 (MQ=255) tGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTATTTCCacatcat > 1:287619/1‑142 (MQ=255) ttaTTGCTGCGTGCATGAAAAAACCGGGGTTCGTGGCCGGTTTTTTTATGCATTCCTGTGCGGGCCTCTTCGCGGGCGCGCCCG‑CGAATGCCTTTAGCAGATCATTCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGa < 8:30016/146‑1 (MQ=255) tAATTGCTGCTTGCATGAAAAAACCGGCCTTCGTTGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGttta < 6:128410/148‑3 (MQ=255) aaTTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAATGCCTTTAGCAGATCAATCGTTAAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGAc > 6:293659/1‑148 (MQ=255) aTTGCTGCGTTCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGACg < 4:202456/148‑1 (MQ=255) aTTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCTGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGACGa < 3:277412/149‑1 (MQ=255) ataaaaaaaCCGGCCACGAAGGCCGGTTTTTTCATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCAt < 2:42987/114‑1 (MQ=37) ataaaaaaaCCGGCCACGAAGGCCGGTTTTTTCATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCAt > 1:42987/4‑117 (MQ=37) aaaaaaaCCGGCCACGAAGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCa < 3:88401/105‑1 (MQ=38) aaaaaaaCCGGCCACGAAGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCa > 4:88401/2‑106 (MQ=38) aaaaaaCCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAATGCCTTTAGCAGATCAAGCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGACGATGCCGCAGCACAGCt > 5:137770/1‑149 (MQ=255) aaaaCCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGACGCTGCCGCAGAACAGCt > 7:146786/1‑147 (MQ=255) ggCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGACGATGCCGCAGAACAGCTCAGCGGtt > 7:30365/1‑149 (MQ=255) | CCACGAAGAGCACGGCGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCG‑CGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGACGATGCCGCAGAACAGCTCAGCGGTT > NC_002947/1243597‑1243882 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |