| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,993,604 | A→C | 7.2% | intergenic (+42/+56) | PP_1780 → / ← PP_1781 | mannosyltransferase/acyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,993,604 | 0 | A | C | 7.2% | 209.1 / 6.4 | 70 | intergenic (+42/+56) | PP_1780/PP_1781 | mannosyltransferase/acyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (37/27); new base C (3/2); total (40/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.45e-01 | |||||||||||
GCCTTGGCTACATTGGAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTCAACAGGCTTAGCGGG > NC_002947/1993457‑1993750 | gCCTTGGCTACATTGGAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAg > 5:121041/1‑149 (MQ=255) ccTTGGCTACATTGGAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGc > 8:309009/1‑149 (MQ=255) cTTGGCTACATTGGAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGcc > 8:80870/1‑149 (MQ=255) ggCTACATTGGAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGc < 8:138514/148‑1 (MQ=255) gCTACATTGGAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGAGCAGCCGCAc > 8:170471/1‑149 (MQ=255) tACATTGGAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTg > 3:296696/1‑149 (MQ=255) cATTGGAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTg < 7:80870/147‑1 (MQ=255) cATTGGAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTGc < 6:42554/148‑1 (MQ=255) aTTGGAGTGAAATTGCAGCTGAACTAATACGCCTGGTGTTGGATGTTACTTAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCTGCGCCGCAc < 8:168775/144‑1 (MQ=255) aTTGGAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCTGCGCCGCAc > 7:168775/1‑144 (MQ=255) aTTGGAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTGCAg > 2:62896/1‑149 (MQ=255) gTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCttt < 4:303636/149‑1 (MQ=255) gTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCttt < 7:170471/149‑1 (MQ=255) tGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCtttt < 1:62896/149‑1 (MQ=255) cAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCatat > 2:291405/1‑148 (MQ=255) gAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTNCAGGGCTTTNGCCATATGANttn > 6:256735/1‑148 (MQ=255) tAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACtt > 1:111947/1‑144 (MQ=255) tAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACtt < 2:111947/144‑1 (MQ=255) aaaCGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGa < 1:291405/148‑1 (MQ=255) gtgtTGGAGGTTACGGAAAATACTCAGCGGAACCATAAGCCGCCTGCTCAAGCGCACTGATTGCGTCCGCTTGGCCATCCATGAACCCGGCAGGGCGGCGCTGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGt < 1:169803/149‑1 (MQ=255) ttGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTaaa < 2:41782/149‑1 (MQ=255) ttACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCt > 3:85287/1‑148 (MQ=255) gggAAATTACTCAGCTGAAGCATAAGCCGCGTGCTCAAGCGCACTGATTGCGTAGGCTTGGCCATCCATGAACCCTGCAGTGCGGCGAAGCCGCAGTGCAGGGCTTTTGCCATATGAGTTGTATGAGGCACGCAGTAAACGCGCTTATc < 2:14365/148‑1 (MQ=255) cgtaaatTACTCTGCTGAAGCATAAGCCGCCTGCTCAAGCGCTCTTATTGCTTAGGCTTGGCCATCCATGAACCCTGCAGTGCGGGGAAGCCGCACTGCAGGGCTTTTGCCTTATGAGTTTTATGAGGCACGCAGTAAACGCGCTTATc < 2:19695/146‑1 (MQ=255) aaaaTACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCg > 3:297461/1‑148 (MQ=255) tCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACggg > 1:337583/1‑149 (MQ=255) tCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACgg > 3:50118/1‑148 (MQ=255) cTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCtttt < 2:85740/94‑1 (MQ=255) cTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCtttt > 1:85740/1‑94 (MQ=255) cTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGca > 7:1747/1‑147 (MQ=255) tGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGa > 4:304915/1‑111 (MQ=255) tGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGa < 3:304915/111‑1 (MQ=255) gCATAAGGCGCCTGCTCAAGCGCACTGATTGCGAACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTg > 5:1440/1‑149 (MQ=255) aTAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGc > 5:132084/1‑149 (MQ=255) gcgcCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGc > 3:145693/1‑149 (MQ=255) gcCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCata < 4:15449/86‑1 (MQ=255) ccTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTgg > 8:99429/1‑149 (MQ=255) cTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGgc > 1:82255/1‑149 (MQ=255) gCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGgcg > 7:222150/1‑148 (MQ=255) tCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGgcg > 4:119945/1‑146 (MQ=255) tCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGCGCACAGCCTGGCGACGCTGgcg > 8:144112/1‑146 (MQ=255) acgcgcACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGAGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGAt < 5:256735/147‑1 (MQ=255) aaGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGa > 8:199280/1‑148 (MQ=255) cgcACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGc < 6:132084/149‑1 (MQ=255) cgcACTGATTGCGAACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGc < 6:1440/149‑1 (MQ=255) gcACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCg > 2:283097/1‑149 (MQ=255) gcACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCg > 2:261190/1‑149 (MQ=255) cACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGt < 1:283097/149‑1 (MQ=255) aTTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGc > 5:4731/1‑149 (MQ=255) cGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGTCTGGCGACGCTGGCGCAGATAGCGTTGAGCCggg > 3:38260/1‑149 (MQ=255) gTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTAAGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGc > 7:263130/1‑149 (MQ=255) cGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGtt < 7:99429/149‑1 (MQ=255) ggCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTcca < 4:296696/147‑1 (MQ=255) ccatGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCgg > 6:211928/1‑149 (MQ=255) catGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGt < 1:261190/149‑1 (MQ=255) atGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTg < 4:50118/149‑1 (MQ=255) atGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTg < 4:145693/149‑1 (MQ=255) aaCCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTggg < 6:4731/148‑1 (MQ=255) ccTGCAGTGCGGCTGCGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTgg > 1:146885/1‑144 (MQ=255) ccTGCAGTGCGGCTGCGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTgg < 2:146885/144‑1 (MQ=255) ccTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTCaa > 1:329869/1‑149 (MQ=255) ccTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTCaa > 4:239068/1‑149 (MQ=255) cTGCAGTGCGGCTGCGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTCaa > 5:60666/1‑148 (MQ=255) cTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTCaa > 5:135625/1‑148 (MQ=255) tGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGa < 6:481/118‑1 (MQ=255) tGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGa > 5:481/1‑118 (MQ=255) cAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTCAACAgg > 3:114326/1‑149 (MQ=255) cgcAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTCAACAgg > 3:267203/1‑141 (MQ=255) cgcAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTCAACAgg < 4:267203/141‑1 (MQ=255) gcAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGTCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTCAACAGGCTTAGCggg < 4:38260/149‑1 (MQ=255) | GCCTTGGCTACATTGGAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCGCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTCAACAGGCTTAGCGGG > NC_002947/1993457‑1993750 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |