| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,482,511 | T→A | 7.6% | intergenic (‑136/‑42) | PP_2176 ← / → PP_2177 | transcriptional regulator, LysR family/transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,482,511 | 0 | T | A | 7.6% | 205.7 / 3.5 | 70 | intergenic (‑136/‑42) | PP_2176/PP_2177 | transcriptional regulator, LysR family/transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (30/34); new base A (4/2); total (34/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.22e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AGGATTCAGCCACGAGGCTACTCGCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTGGGTGAACTGGCCGAGCGCAT > NC_002947/2482363‑2482647 | aggaTTCAGCCACGAGGCTACTCGCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAAtttt < 7:294108/149‑1 (MQ=255) ggaTTCAGCCACGAGGCTACTCGCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTc < 7:39079/149‑1 (MQ=255) ggaTTCAGCCACGAGGCTACTCGCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTCACGCGTGAAATTTTTCATGTAAATTTTc < 1:193749/149‑1 (MQ=255) gaTTCAGCCACGAGGCTACTCGCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCa > 7:76111/1‑149 (MQ=255) gaTTCAGCCACGAGGCTACTCGCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCa < 3:311955/149‑1 (MQ=255) aGCCACGAGGCTACTCGCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGaa > 2:325918/1‑148 (MQ=255) cACGAGGCTACTCGCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAAt < 8:76111/149‑1 (MQ=255) ggCTACTCGCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGAAAATTTACATGAAAAAtttcac < 8:297869/149‑6 (MQ=255) cGCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAAt > 2:297911/1‑149 (MQ=255) gCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGTGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAAtt > 3:249101/1‑149 (MQ=255) aGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCAc < 3:124521/149‑1 (MQ=255) aGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCAc > 5:115154/1‑149 (MQ=255) gcgcCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACg < 1:225561/149‑1 (MQ=255) catgaccaGAAACCCGCGCCACCGCAGCCAATCCGCCCCGTTGCGCATCAAGACCTGTGTGGGGGGCTTCACATTTCCATCGTTCGTCTTGTCGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCa < 4:249101/142‑1 (MQ=255) tAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTcc < 7:45716/149‑1 (MQ=255) tAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTcc > 5:27841/1‑149 (MQ=255) aGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGa > 1:224134/1‑148 (MQ=255) aGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGa > 7:22630/1‑148 (MQ=255) aaCCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTATATTTACATGAAACATAAGTCTAAAAATTTCACGGCAGTCCGAAAc > 8:146200/1‑148 (MQ=255) aCCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGa < 6:27841/149‑1 (MQ=255) ccGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGAt > 1:139630/1‑148 (MQ=255) ccGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATg < 8:128316/149‑1 (MQ=255) cgcgCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGa < 5:305104/149‑1 (MQ=255) gcgcCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATg > 2:118043/1‑147 (MQ=255) gcgcCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATg > 6:136331/1‑147 (MQ=255) gcCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATg > 4:216652/1‑145 (MQ=255) ccGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAAt < 3:258849/107‑1 (MQ=255) ccGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAAt > 4:258849/1‑107 (MQ=255) cGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCAc < 6:115154/149‑1 (MQ=255) gCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAag < 1:297911/149‑1 (MQ=255) ccAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGAAAATTTACATGAAAAAtttcac < 8:268738/106‑6 (MQ=38) ccAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGAAAATTTACATGAAAAAtttcac > 7:268738/1‑101 (MQ=38) cAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAagag > 3:47257/1‑149 (MQ=255) aaTCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAgg > 3:41285/1‑149 (MQ=255) aTCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGt > 3:71434/1‑149 (MQ=255) aTCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGt > 4:152209/1‑149 (MQ=255) tCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGtt < 6:3895/149‑1 (MQ=255) ccGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAAATTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTg < 5:59797/149‑1 (MQ=255) gCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGaa < 1:212222/149‑1 (MQ=255) ccACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAg < 3:155276/149‑1 (MQ=255) gTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACg < 6:296304/107‑1 (MQ=255) gTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACg > 5:296304/1‑107 (MQ=255) aGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTa < 2:139630/149‑1 (MQ=255) gCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCa > 8:20816/1‑98 (MQ=255) gCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCa < 7:20816/98‑1 (MQ=255) gCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAgg > 5:252401/1‑127 (MQ=255) gCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTAt < 3:216652/149‑1 (MQ=255) gCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTAt > 4:76742/1‑149 (MQ=255) cccTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTAtt < 1:325918/149‑1 (MQ=255) ctctGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGACGAAGATGCAAGAAGAGGTTGAAGCCCTCGCGATCCTTATTCa > 8:47362/1‑149 (MQ=255) gggCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTAt < 4:231210/140‑1 (MQ=255) gggCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTAt > 3:231210/1‑140 (MQ=255) ggcggcTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTg > 4:283720/1‑149 (MQ=255) caTTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCa < 8:22630/149‑1 (MQ=255) aTTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTa < 6:50270/127‑1 (MQ=255) aTTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGAGGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTc > 4:56229/1‑147 (MQ=255) tCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTg < 3:152209/149‑1 (MQ=255) gTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGTACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACATGAc > 1:166396/1‑149 (MQ=255) ttCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGAcc > 3:17664/1‑149 (MQ=255) gCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTgg < 3:76742/149‑1 (MQ=255) cTTGACGCGTGAAATTTTTCATGTAAATTTACATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTggg > 2:236117/1‑149 (MQ=255) gACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTGGGTg > 7:127079/1‑148 (MQ=255) cgcgTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTGGGTGAAc < 6:101076/149‑1 (MQ=255) gcgTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGAt < 4:8982/101‑1 (MQ=255) cgTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTg > 7:195084/1‑140 (MQ=255) cgTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTg < 8:190081/140‑1 (MQ=255) cgTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTg < 8:195084/140‑1 (MQ=255) tGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTGGGTGAACTGGc > 3:284652/1‑149 (MQ=255) ttaTTTTTCATGAAAATTTACATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTGGGTGAACTGGcc > 5:215934/3‑148 (MQ=255) tCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTGGGTGAACTGGCCGAGCGCa < 1:300867/148‑1 (MQ=255) cATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTGGGTGAACTGGCCGAGCGCAt < 4:71434/148‑1 (MQ=255) | AGGATTCAGCCACGAGGCTACTCGCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTGGGTGAACTGGCCGAGCGCAT > NC_002947/2482363‑2482647 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |