| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 272,007 | A→T | 8.0% | intergenic (+12/+17) | PP_0218 → / ← metP | sensory box protein/L,D‑methionine D‑methionine ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 272,007 | 0 | A | T | 8.0% | 218.1 / 7.8 | 75 | intergenic (+12/+17) | PP_0218/metP | sensory box protein/L,D‑methionine D‑methionine ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base A (35/34); new base T (4/2); total (39/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.76e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.76e-01 | |||||||||||
GGATGCAGGTGCATGCCGAGGGCATCGAGCAGGCGGAACAGGCCAGCTTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGCATGATCTGGCTGTCGAAACGCTGGTAGCCATACCGATAGGC > NC_002947/271865‑272152 | ggATGCAGGTGCATGCCGAGGGCATCGAGCAGGCGGAACAGGCCAGCTTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGGGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAagcag > 1:279311/1‑149 (MQ=255) aTGCAGGTGCATGCCGAGGGCATCGAGCAGGCGGAACAGGCCAGCTTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGcc < 7:36626/149‑1 (MQ=255) aGGTGCATGCCGAGGGCATCGAGCAGGCGGAACAGGCCAGCTTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCTTTGCAGcccggt < 6:196406/149‑4 (MQ=255) tGCATGCCGAGGGCATCGAGCAGGCGGAAGAGGCCAGCTTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGAt < 7:150930/149‑1 (MQ=255) tGCATGCCGAGGGCATCGAGCAGGCGGAACAGGCCAGCTTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGAt > 2:77464/1‑149 (MQ=255) cATGCCGAGGGCATCGAGCAGGCTGATCAGGCCAGCTTCCTGCTGCAGGAGGAGTGCGAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGAtt < 5:99685/148‑1 (MQ=255) cATGCCGAGGGCATCGAGCAGGCGGAACAGGCCAGCTTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGAttt < 6:129233/149‑1 (MQ=255) cGAGGGCATCGAGCAGGCGGAACAGGCCAGCTTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACg > 7:124185/1‑149 (MQ=255) gAGGGCATCGAGCAGGCGGAACAGGCCAGCTTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGc < 1:141263/149‑1 (MQ=255) gAGGGCATCGAGCAGGCGGAACAGGCCAGCTTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGc > 1:294059/1‑149 (MQ=255) gggCATCGAGCAGGCGGAACAGGCCAGCTTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCtt > 7:223189/1‑149 (MQ=255) gggCATCGAGCAGGCGGAACAGGCCAGCTTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCtt < 2:279311/149‑1 (MQ=255) ggCATCGAGCAGGCGGAACAGGCCAGCTTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTg < 8:223189/149‑1 (MQ=255) aTCGAGCAGGCGGAACAGGCCAGCTTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGtt > 1:284673/1‑148 (MQ=255) aGGCGGAACAGGCCAGCTTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCt < 4:56453/123‑1 (MQ=255) aGGCGGAACAGGCCAGCTTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCt > 3:56453/1‑123 (MQ=255) ggCGGAACAGGCCAGCTTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCTGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCtt < 5:74491/149‑1 (MQ=255) ggCGGAACAGGCCAGCTTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCtt < 8:124185/149‑1 (MQ=255) cGGAACAGGCCAGCTTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCg > 2:5896/1‑149 (MQ=255) aaCAGGCCAGCTTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGccc > 7:35726/1‑116 (MQ=255) aaCAGGCCAGCTTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGccc < 8:35726/116‑1 (MQ=255) cAGGCCAGCTTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAgg > 7:124956/1‑149 (MQ=255) aGGCCAGCTTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGc < 8:124956/149‑1 (MQ=255) gCCAGCTTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCcggcgg > 6:34696/1‑149 (MQ=255) gCCAGCTTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCgg > 6:223044/1‑149 (MQ=255) cAGCTTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTc < 5:182063/149‑1 (MQ=255) gctgcAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAg > 8:97963/1‑149 (MQ=255) aggaggAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGa > 3:253115/1‑149 (MQ=255) ggggCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTaa < 1:139049/146‑1 (MQ=255) ggggCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTaa > 2:139049/1‑146 (MQ=255) gggCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCt < 2:284673/149‑1 (MQ=255) aGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCa < 4:253115/149‑1 (MQ=255) ggttACTGGTTCGGGCGTCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGc < 3:210293/146‑1 (MQ=255) gggTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAg > 8:107007/1‑148 (MQ=255) gggTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACACTACCAGc < 2:201234/149‑1 (MQ=255) gTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCAt < 1:5896/149‑1 (MQ=255) tACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATg > 8:169566/1‑149 (MQ=255) tACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATg < 3:4652/149‑1 (MQ=255) aCTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATgg > 5:140614/1‑149 (MQ=255) gTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACg < 8:195719/133‑1 (MQ=255) gTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACg > 7:195719/1‑133 (MQ=255) gTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGAt < 7:97963/149‑1 (MQ=255) gTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGAt > 5:248203/1‑149 (MQ=255) ggcCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCa < 6:248203/149‑1 (MQ=255) ccAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCa < 5:341773/147‑1 (MQ=255) ccAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCa > 6:341773/1‑147 (MQ=255) cAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGc > 2:167725/1‑148 (MQ=255) cGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGCATGATCt > 1:197351/1‑149 (MQ=255) ggCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGCATGATCTg > 7:84649/1‑149 (MQ=255) cTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGCATGATCTGGc > 4:117564/1‑149 (MQ=255) gAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCa < 4:156196/129‑1 (MQ=255) gAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCa > 3:156196/1‑129 (MQ=255) aGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGCATGATCTGGCt < 5:131795/147‑1 (MQ=255) aGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGCATGATCTGGCt < 7:169566/147‑1 (MQ=255) aGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGCATGATCTGGCTGt > 6:163275/1‑149 (MQ=255) aGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGCATGATCTGGCTGt < 2:197351/149‑1 (MQ=255) gATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGCATGATCTGGCTGTc > 7:193771/1‑148 (MQ=255) gATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGCATGATCTGGCTGTCg < 8:22541/149‑1 (MQ=255) tCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCACCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGCATGATCTGGCTGTCGa > 2:337065/1‑148 (MQ=255) tCTTCGCTGGGATTGAGACCGGGATGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGCATGATCTGGATGTCGa > 2:49039/1‑148 (MQ=255) cTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGCATGATCTGGCTGTCGaaa > 1:280969/1‑149 (MQ=255) cGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGCATGATCTGGCt > 5:84169/1‑139 (MQ=255) cGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGCATGATCTGGCt < 6:84169/139‑1 (MQ=255) ggATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGCATGATCTGGCTGTCGAAACGCTgg < 5:163275/147‑1 (MQ=255) ggATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGCATGATCTGGCTGTCGAAACGCTgg > 2:269106/1‑147 (MQ=255) gATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGCATGATCTGGCTGTCGAAACGCTGGTAg > 5:101623/1‑149 (MQ=255) atctgagggCTGCTTTGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGCATGATCTGGCTGTCGaaa < 7:311165/130‑1 (MQ=255) atctgagggCTGCTTTGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGCATGATCTGGCTGTCGaaa > 8:311165/7‑136 (MQ=255) agaCCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGCATGATCTGGCTGTCGAAACGCTGGTAGCCATa < 6:140614/149‑1 (MQ=255) ctgagggCTGCTTTGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGCATGATCTGGCTGTCGAAACGCTGGTAGCCATAc > 2:173273/5‑149 (MQ=255) tgagggCTGCTTTGCAGCCCTCAGATTTCAACGCTTGTTCCACCCCTTCGCCAGGAGGTCCCCGCCCAGCTGGATCAACGCCCCTACCGCTCCCACCCTGGCGAGCACGGTCAGCATGATCTGGCTGGCGAACCGCTGCTACCCAAAcc > 8:111967/4‑149 (MQ=255) tgagggCTGCTTTGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGCATGATCTGGCTGTCGAAACGCTGGTAGCAATAcc > 6:224752/4‑149 (MQ=255) cGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGCATGATCTGGCTGTCGaaa > 6:266507/1‑131 (MQ=255) cGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGCATGATCTGGCTGTCGaaa < 5:266507/131‑1 (MQ=255) cAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGCATGATCTGGCTGTCGAAACGCTGGTAGCCATACCGATAGGc < 5:223044/147‑1 (MQ=255) | GGATGCAGGTGCATGCCGAGGGCATCGAGCAGGCGGAACAGGCCAGCTTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGCATGATCTGGCTGTCGAAACGCTGGTAGCCATACCGATAGGC > NC_002947/271865‑272152 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |