| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,679,968 | A→T | 5.5% | G89G (GGT→GGA) | PP_3245 ← | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,679,968 | 0 | A | T | 5.5% | 221.1 / 2.2 | 72 | G89G (GGT→GGA) | PP_3245 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (33/35); new base T (2/2); total (35/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.86e-01 | |||||||||||
CGCGCAGCAGAAATACTTTCCAATCCATAGCAAACCTCTTCCGCAGGCACACGCCCGCATGAACGCCATCAGTTGGCGCGGTTGAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCGGGCCTG‑‑TCGCAAGCGACTGGGGCTACTGTCCAAGGCAGGTCTCCTGTTGAGGAAGGCAAAATTGCGTCGCGGACCATACGCCGCAGGG > NC_002947/3679822‑3680113 | cgcgCAGCAGAAATACTTTCCAATCCATAGCAAACCTCTTCCGCAGGCACACGCCCGCATGAACGCCATCAGTTGGCGCGGTTGAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAaccacc < 8:40688/149‑1 (MQ=255)cgcgCAGCAGAAATACTTTCCAATCCATAGCAAACCTCTTCCGCAGGCACACGCCCGCATGAACGCCATCAGTTGGCGCGGTTGAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAaccacc < 5:228055/149‑1 (MQ=255) gcgcAGCAGAAATACTTTCCAATCCATAGCAAACCTCTTCCGCAGGCACACGCCCGCATGAACGCCATCGGTTGGCGCGGTTGAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCg > 5:218835/1‑149 (MQ=255) gcagcaGAAATACTTTCCAATCCATAGCAAACCTCTTCCGCAGGCACACGCCCGCATGAACGCCATCAGTTGGCGCGGTTGAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTc < 7:257801/149‑1 (MQ=255) agcagAAATACTTTCCAATCCATAGCAAACCTCTTCCGCAGGCACACGCCCGCATGAACGCCATCAGTTGGCGCGGTTGAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCtt < 7:210496/149‑1 (MQ=255) agAAATACTTTCCAATCCATAGCAAACCTCTTCCGCAGGCACACGCCCGCATGAACGCCATCAGTTGGCGCGGTTGAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGcc < 3:218231/149‑1 (MQ=255) gAAATACTTTCCAATCCATAGCAAACCTCTTCCGCAGGCACACGCCCGCATGAACGCCATCAGTTGGCGCGGTTGAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCa < 5:132217/149‑1 (MQ=255) gAAATACTTTCCAATCCATAGCAAACCTCTTCCGCAGGCACACGCCCGCATGAACGCCATCAGTTGGCGCGGTTGAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCa < 2:26909/149‑1 (MQ=255) tACTTTCCAATCCATAGCAAACCTCTTCCGCAGGCACACGCCCGCATGAACGCCATCAGTTGGCGCGGTTGAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGc < 3:119061/149‑1 (MQ=255) tttCCAATCCATAGCAAACCTCTTCCGCAGGCACACGCCCGCATGAACGCCATCAGTTGGCGCGGTTGAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGc > 4:142758/1‑149 (MQ=255) tCCAATCCATAGCAAACCTCTTCCGCAGGCACACGCCCGCATGAACGCCATCAGTTGGCGCGGTTGAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGc > 5:241647/1‑147 (MQ=255) cATAGCAAACCTCTTCCGCAGGCACACGCCCGCATGAACGCCATCAGTTGGCGCGGTTGAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAggg < 8:58220/149‑1 (MQ=255) cATAGCAAACCTCTTCCGCAGGCACACGCCCGCATGAACGCCATCAGTTGGCGCGGTTGAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAggg < 3:142758/149‑1 (MQ=255) tAGCAAACCTCTTCCGCAGGCACACGCCCGCATGAACGCCATCAGTTGGCGCGGTTGAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACatgcc > 7:111202/1‑144 (MQ=255) aGCAAACCTCTTCCGCAGGCACACGCCCGCATGAACGCCATCAGTTGGCGCGGTTGAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAg < 8:63837/149‑1 (MQ=255) ctctTCCGCAGGCACACGCCCGCATGAACGCCATCAGTTGGCGCGGTTGAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTg > 2:207453/1‑149 (MQ=255) tctTCCGCAGGCACACGCCCGCATGAACGCCATCAGTTGGCGCGGTTGAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGc > 5:215494/1‑149 (MQ=255) ctTCCGCAGGCACACGCCCGCATGAACACCATCAGTTGGCGCGGTTGAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGcc < 1:297363/149‑1 (MQ=255) cAGGCACACGCCCGCATGAACGCCATCAGTTGGCGCGGTTGAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAggg < 3:139626/131‑1 (MQ=255) cAGGCACACGCCCGCATGAACGCCATCAGTTGGCGCGGTTGAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAggg > 4:139626/1‑131 (MQ=255) cAGGCACACGCCCGCATGAACGCCATCAGTTGGCGCGGTTGAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTa < 6:241647/149‑1 (MQ=255) gCACACGCCCGCATGAACGCCATCAGTTGGCGCGGTTGAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAgcg > 7:4421/1‑149 (MQ=255) cacaCGCCCGCATGAACGCCATCAGTTGGCGCGGTTGAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAgcgc < 1:207453/149‑1 (MQ=255) acacGCCCGCATGAACGCCATCAGTTGGCGCGGTTGAAATAACCAGAAATTGCGCAGGACCCCGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAgcgcg > 3:123523/1‑149 (MQ=255) ccGCATGAACGCCATCAGTTGGCGCGGTTGAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCAcgc > 5:104733/1‑149 (MQ=255) ccGCATGAACGCCATCAGTTGGCGCGGTTGAAATAACCAGAAATTGCGCAGGACAACGTGGAGGGAAGCAGAAGCGGGGGTTACAGGAAACCACCGTCTTCCCAGAGCGGCCAGACAAGGCAGAACACTCCCGGCCTAGCGCGCCAcgc > 3:9624/1‑149 (MQ=255) cGCATGAACGCCATCAGTTGGCGCGGTTGAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCtt < 2:262208/99‑1 (MQ=255) cGCATGAACGCCATCAGTTGGCGCGGTTGAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCtt > 1:262208/1‑99 (MQ=255) gCATGAACGCCATCAGTTGGCGCGGTTGAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCgg > 6:157387/1‑149 (MQ=255) gCATGAACGCCATCAGTTGGCGCGGTTGAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCgg < 6:71543/149‑1 (MQ=255) gCATGAACGCCATCAGTTGGCGCGGTTGAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCgg < 6:40444/149‑1 (MQ=255) aTGAACGCCATCATGTGGCGCGGTTGAAATAACCAGATATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGTGGTTACAGGAAACCACAGTCTTGCCAGAGCTGCCAGACAGGTCAGAACACTGCCGGGCTAGCGCGCCACGCGTGc < 6:228287/149‑1 (MQ=255) cGCCATCAGTTGGCGCGGTTGAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCGGGCCTG‑‑Tc < 3:92282/149‑1 (MQ=255) cGCCATCAGTTGGCGCGGTTGAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCGGGCCTG‑‑Tc < 2:164238/149‑1 (MQ=255) cATCAGTTGGCGCGGTTGAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCtt < 1:49948/88‑1 (MQ=255) cATCAGTTGGCGCGGTTGAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCtt > 2:49948/1‑88 (MQ=255) cATCAGTTGGCGCGGTTGAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTa < 4:126356/126‑1 (MQ=255) cATCAGTTGGCGCGGTTGAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTa > 3:126356/1‑126 (MQ=255) aTCAGTTGGCGCGGTTGAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCGGGCCTG‑‑TCGc > 5:49508/1‑147 (MQ=255) aTCAGTTGGCGCGGTTGAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCGGGCCTG‑‑TCGCaa < 3:883/149‑1 (MQ=255) ggCGCGGTTGAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCGGGCCTG‑‑TCGCAAGCGACTg > 4:5309/1‑149 (MQ=255) gcgGTTGAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCGGGCCTG‑‑TCGCAAGCGACTgggg < 1:246370/149‑1 (MQ=255) gTTGAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCGGGCCTG‑‑TCGCAAGCGACTGGGGCTa < 6:104733/149‑1 (MQ=255) gAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCGGGCCTG‑‑TCGCAAGCGACTGGGGCTACt < 3:222563/148‑1 (MQ=255) aaTAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCGGGCCTG‑‑TCGCAAGCGACTGGGGCTACTGTc > 4:126860/1‑149 (MQ=255) ccAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCGGGCCTG‑‑TCGCAAGCGACTGGGGCTACTGTCCAAgg > 2:98103/1‑149 (MQ=255) cAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCGGGCCTG‑‑TCGCAAGCGACTGGGGCTACTGTCCAAgg > 3:29397/1‑148 (MQ=255) cAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCGGGCCTG‑‑TCGCAAGCGACTGGGGCTACTGTCCAAgg > 4:278113/1‑148 (MQ=255) gAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCGGGCCTG‑‑TCGCAAGCGACTGGGGCTACTGTCCAAGGCAg > 8:13502/1‑149 (MQ=255) gAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCGGGCCTG‑‑TCGCAAGCGACTGGGGCTACTGTCCAAGGCAg > 4:4167/1‑149 (MQ=255) gAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCGGGCCTG‑‑TCGCAAGCGACTGGGGCTACTGTCCAAGGCAg < 6:218835/149‑1 (MQ=255) gcgcAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCGGGCCTG‑‑TCGCAAGCGACTGGGGCTACTGTCCAAGGCa < 5:241982/142‑1 (MQ=255) gcgcAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCGGGCCTG‑‑TCGCAAGCGACTGGGGCTACTGTCCAAGGCa > 6:241982/1‑142 (MQ=255) ccACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCGGTCCTG‑‑TCGCAAGCGACTGGGGCTACTGTCCAAGGCAGGTCTCCTGTTGAg > 7:160668/1‑148 (MQ=255) aCGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCGGGCCTG‑‑TCGCAAGCGACTGGGGCTACTGTCCAAGGCAGGTCTCCTGTTGAGGaa < 8:4421/149‑1 (MQ=255) tGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCGGGCCTG‑‑TCGCAAGCGACTGGGGCTACTGTCCAAGGCAGGTCTCCTGTTGAGGAAgg > 5:150493/1‑148 (MQ=255) ggAAGGAGAAGCGGGGGTTACAGGAAACCTCCGTCTTGc < 1:266768/39‑1 (MQ=255) ggAAGGAGAAGCGGGGGTTACAGGAAACCTCCGTCTTGc > 2:262547/1‑39 (MQ=255) ggAAGGAGAAGCGGGGGTTACAGGAAACCTCCGTCTTGc < 1:262547/39‑1 (MQ=255) ggAAGGAGAAGCGGGGGTTACAGGAAACCTCCGTCTTGc > 2:266768/1‑39 (MQ=255) ggAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCGGGCCTG‑‑TCGCAAGCGACTGGGGCTACTGTCCAAGGCAGGTCTCCTGTTGAGGAAGGCAAAAt > 4:194242/1‑149 (MQ=255) gAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCGGGCCTG‑‑TCGCAAGCGACTGGGGCTACTGTCCAAGGCAGGTCTCCTGTTGAGGAAGGCaa < 6:13350/145‑1 (MQ=255) gAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCGGGCCTG‑‑TCGCAAGCGACTGGGGCTACTGTCCAAGGCAGGTCTCCTGTTGAGGAAGGCaa > 5:13350/1‑145 (MQ=255) gaAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCGGGCCTGACTCGCAAGCGACTGGGGCTACTGTCCAAGGCAGGTCTCCTGTTGAGGAAGGCAAAATTGCGt < 1:98103/149‑1 (MQ=255) gaAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCGGGCCTG‑‑TCGCAAGCGACTGGGGCTACTGTCCAAGGCAGGTCTCCTGTTGAGGAAGGCAAAATTGCGTcg > 5:121015/1‑149 (MQ=255) aaGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCGGGCCTG‑‑TCGCAAGCGACTGGGGCTACTGTCCAAGGCAGGTCTCCTGTTGAGGAAGGCAAAATTGCGTc > 8:33162/1‑147 (MQ=255) gCGGGTGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCGGGCCTG‑‑TCGCAAGCGACTGGGGCTACTGTCCAAGGCAGGTCTCCTGTTGAGGAAGGCAAAATTGCGTCGCgg < 7:33162/149‑1 (MQ=255) gCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCGGGCCTG‑‑TCGCAAGCGACTGGGGCTACTGTCCAAGGCAGGTCTCCTGTTGAGGAAGGCAAAATTGCGTcgcg > 7:27921/1‑148 (MQ=255) cGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCGGGCCTG‑‑TAGCAAGCGACTGGGGCTACTGTACAAGGCAGGTCTCATGTTGAGTAAGGCAAAATTGAGTCGCGGa > 6:126969/1‑149 (MQ=255) gTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCGGGCCTG‑‑TCGCAAGCGACTGGGGCTACTGTCCAAGGCAGGTCTCCTGTTGAGGAAGGCAAAATTGCGTCGCGGACCATa < 3:4167/149‑1 (MQ=255) gTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCGGGCCTG‑‑TCGCAAGCGACTGGGGCTACTGTCCAAGGCAGGTCTCCTGTTGAGGAAGGCAAAATTGCGTCGCGGACCATa < 7:13502/149‑1 (MQ=255) aCAGGAAACCACTGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCGGGCCTG‑‑TCGCAAGCGACTg > 6:309908/1‑87 (MQ=255) aCAGGAAACCACTGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCGGGCCTG‑‑TCGCAAGCGACTg < 5:309908/87‑1 (MQ=255) aaCCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCGGGCCTG‑‑TCGCAAGCGACTGGGGCTACTGTCCAAGGCAGGTCTCCTGTTGAGGAAGGCAAAATTGCGTCGCGGACCATACGCCGCAgg < 3:126860/149‑1 (MQ=255) accaccGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCGGGCCTG‑‑TCGCAAGCGACTGGGGCTACTGTCCAAGGCAGGTCTCCTGTTGAGGAAGGCAAAATTGCGTCGCGGACCATACGCCGCAggg < 6:121015/149‑1 (MQ=255) accaccGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCGGGCCTG‑‑TCGCAAGCGACTGGGGCTACTGTCCAAGGCAGGTCTCCTGTTGAGGAAGGCAAAATTGCGTCGCGGACCATACGCCGCAggg < 3:194242/149‑1 (MQ=255) caccGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCGGGCCTG‑‑TCGCAAGCGACTGGGGCTACTGTCCAAGGCAGGTCTCCTGTTGAGGAAGGCAAAATTGCGTCGCGGACCATACGCCGCAggg > 6:102859/1‑147 (MQ=255) caccGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCGGGCCTG‑‑TCGCAAGCGACTGGGGCTACTGTCCAAGGCAGGTCTCCTGTTGAGGAAGGCAAAATTGCGTCGCGGACCATACGCCGCAggg > 4:219492/1‑147 (MQ=255) | CGCGCAGCAGAAATACTTTCCAATCCATAGCAAACCTCTTCCGCAGGCACACGCCCGCATGAACGCCATCAGTTGGCGCGGTTGAAATAACCAGAAATTGCGCAGGACCACGTGGAGGGAAGGAGAAGCGGGGGTTACAGGAAACCACCGTCTTGCCAGAGCGGCCAGACAGGGCAGAACACTGCCGGGCTAGCGCGCCACGCGGGCCTG‑‑TCGCAAGCGACTGGGGCTACTGTCCAAGGCAGGTCTCCTGTTGAGGAAGGCAAAATTGCGTCGCGGACCATACGCCGCAGGG > NC_002947/3679822‑3680113 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |