| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,680,738 | C→G | 8.3% | intergenic (+24/+20) | crtZ → / ← PP_3247 | beta‑carotene hydroxylase/bile acid/Na+ symporter family transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,680,738 | 0 | C | G | 8.3% | 220.7 / 9.8 | 72 | intergenic (+24/+20) | crtZ/PP_3247 | beta‑carotene hydroxylase/bile acid/Na+ symporter family transporter |
| Reads supporting (aligned to +/- strand): ref base C (36/30); new base G (4/2); total (40/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.86e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.59e-01 | |||||||||||
GCACCGCTTGCACCATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGCCGGCACCGCCATGGTCGCGTTG > NC_002947/3680597‑3680884 | gcACCGCTTGCACCATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCggg < 5:313128/149‑1 (MQ=255) ccGCTTGCACCATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCAGGTGCCGGGcgt < 3:20370/149‑3 (MQ=255) ttGCACCATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCggg > 7:84224/1‑149 (MQ=255) gCACCATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAA‑TCGTGACGCATCCCTGGCATGCCCGGCAGGTGCCGGGcgtgcca < 8:228512/147‑7 (MQ=255) gCACCATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGt < 4:262759/148‑1 (MQ=255) aCCATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAACTCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGa < 1:75718/149‑1 (MQ=255) aCCATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGa > 8:75688/1‑148 (MQ=255) aCCATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGa > 5:36886/1‑148 (MQ=255) ccATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGaaa < 8:84224/149‑1 (MQ=255) gTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCACAGCAGGCGCAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGtt > 4:144872/1‑148 (MQ=255) aGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAA‑TCGTGACGCCTCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACgg > 8:83128/1‑149 (MQ=255) gggAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTg < 2:245172/149‑1 (MQ=255) ggAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTgg < 6:36886/149‑1 (MQ=255) aGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGc < 3:295102/149‑1 (MQ=255) gtgtCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCt > 3:223799/1‑147 (MQ=255) tgtCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAg > 3:15789/1‑149 (MQ=255) gTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCgg > 4:286094/1‑103 (MQ=255) gTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCgg < 3:286094/103‑1 (MQ=255) cGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAgc > 7:274592/1‑143 (MQ=255) cGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAgc < 8:274592/143‑1 (MQ=255) gggTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCcaca > 2:272410/1‑149 (MQ=255) gTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCa < 7:157975/113‑1 (MQ=255) gTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCa > 8:157975/1‑113 (MQ=255) gTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATg < 2:156153/149‑1 (MQ=255) ttctATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCCCCCTTGGGCTCAGCCGCCACATGCCcg > 5:64525/1‑149 (MQ=255) ttctATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCcg > 5:269774/1‑149 (MQ=255) ttctATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCcg > 5:82225/1‑149 (MQ=255) ttctATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCcg > 5:59621/1‑149 (MQ=255) ctATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCcgcg > 1:197959/1‑149 (MQ=255) cgccgccgcTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTc < 4:223799/148‑1 (MQ=255) cgccgccgcTGAAGGTGTTGAAGCAGCAATTGCACAGCAGGCGCAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTc < 3:144872/148‑1 (MQ=255) gtTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAAccc > 3:140185/1‑149 (MQ=255) ttGAAGCAGCAATTGCGCAGCAGGCGCAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCg > 1:270500/1‑149 (MQ=255) gAAGCAGCAATTGCGCAGCAGGCGCAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGc > 1:143997/1‑149 (MQ=255) gcagcaATTGCGCAGCAGGCGCAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCcgc > 6:97484/1‑149 (MQ=255) gcaATTGCGCAGCAGGCGCAGCCAA‑TCGTGACGCATACCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCgg > 8:34881/1‑148 (MQ=255) ttGCGCAGCAGGCGCAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAg < 4:15789/149‑1 (MQ=255) cgcAGCAGGCGCAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGaa < 7:34881/148‑1 (MQ=255) agcagGCGCAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATg < 6:82225/149‑1 (MQ=255) agcagGCGCAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATg < 8:150269/149‑1 (MQ=255) gcagGCGCAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGa < 1:272410/149‑1 (MQ=255) gcagGCGCAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGa < 1:182650/149‑1 (MQ=255) agGAGCAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGTCAAACCCGGCCGCGGTAAAGAACATGAt > 8:36524/1‑148 (MQ=255) gcAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGC > 8:188904‑M1/1‑149 (MQ=255) gcAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGC < 2:270500‑M1/149‑1 (MQ=255) aGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTG < 4:140185‑M1/149‑1 (MQ=255) aa‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATCATCAAGCTGTAc > 2:75778/1‑148 (MQ=255) gTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGTACAACg < 5:97484/148‑1 (MQ=255) tGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGTACAACGCa < 7:140413/149‑1 (MQ=255) gACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAg > 3:212850/1‑149 (MQ=255) cGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGcc < 6:269774/149‑1 (MQ=255) gCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGaacaacgcgacca > 1:314051‑M1/1‑136 (MQ=255) gCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGCCg > 4:23468/1‑149 (MQ=255) gCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTG < 8:162595‑M1/136‑1 (MQ=255) gCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTG > 7:162595‑M1/1‑136 (MQ=255) cccTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCCGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAATCCCGGCCGCGGTAAAGATCATGAt < 8:209293/125‑1 (MQ=255) ccTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGCCGGCAcc > 4:206698/1‑149 (MQ=255) cTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGaacaacgcgaccatggcgg > 4:182875‑M1/1‑130 (MQ=255) ggCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGcc > 3:302823/1‑140 (MQ=255) ggCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGcc < 4:302823/140‑1 (MQ=255) ccgatgCCCGGCAGGTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGCCGGCACCGc > 2:331505/6‑148 (MQ=255) ccgatgCCCGGCAGGTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGCCGGCACCGc > 7:106345/6‑148 (MQ=255) gCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAgccgcc > 7:256954/1‑67 (MQ=255) gCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAgccgcc < 8:256954/67‑1 (MQ=255) gatgCCCGGCAGGTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGCCGGCACCGCCAt > 8:197051/4‑149 (MQ=255) gatgCCCGGCAGGTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGCCGGCACCGCCAt > 8:202386/4‑149 (MQ=255) aCGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGCCGGCACCGCCATg > 6:290628/1‑149 (MQ=255) ccGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAACCAGtacaacgcgaccatcgcggtgccggctg > 8:155917‑M1/1‑121 (MQ=255) ccGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCGCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGCCGGCACCGCGATGGTcg < 7:83128/149‑1 (MQ=255) cGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGCCGGCACCGCCATGGTcgc > 8:55409/1‑149 (MQ=255) aCCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAATAACATGATCAAGCTGtacaacgcgaccatggcggtgccggctgcgttg < 7:155917‑M1/149‑34 (MQ=255) aCCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGCCGGCACCGCCATGGTCGCgttg > 3:223566/1‑149 (MQ=255) | GCACCGCTTGCACCATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAA‑TCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGCCGGCACCGCCATGGTCGCGTTG > NC_002947/3680597‑3680884 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |