Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,701,978 C→T 6.6% D136D (GAC→GAT PP_3267 → Clp protease

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,701,9780CT 6.6% 172.0 / 2.0 60D136D (GAC→GATPP_3267Clp protease
Reads supporting (aligned to +/- strand):  ref base C (32/24);  new base T (2/2);  total (34/26)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.86e-01

CATGGGCAATATCCTCTTCCTTGCCGGAGAGCGACGCACGGCTTGCAGTTTCAGCAAGTTTCTTTTCCACCCGTTTCATTGGACCTTGCATGGTTCGGTGGACCATTCGCGGATGTCCGAGTATGCGATGAGCCTGGATTACGACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTGGATGTACCGCGTTATCTAATGGCCTATCCAAGGATACTGGCGCCGCGGGAGGCGCTGGAAAACGGGATGATCCATGAAATCGACGAGAT  >  NC_002947/3701834‑3702124
                                                                                                                                                |                                                                                                                                                   
cATGGGCAATATCCTCTTCCTTGCCGGAGAGCGACGCACGGCTTGCAGTTTCAGCAAGTTTCTTTTCCACCCGTTTCATTGGACCTTGCATGGTTCGGTGGACCATTCGCGGATGTCCGAGTATGCGATGAGCCTGGATTACGACCTgc                                                                                                                                                 >  1:4340/1‑149 (MQ=255)
cATGGGCAATATCCTCTTCCTTGCCGGAGAGCGACGCACGGCTTGCAGTTTCAGCAAGTTTCTTTTCCACCCGTTTCATTGGACCTTGCATGGTTCGGTGGACCATTCGCGGATGTCCGAGTATGCGATGAGCCTGGATTACGACCTgc                                                                                                                                                 >  6:148617/1‑149 (MQ=255)
cATGGGCAATATCCTCTTACTTGCCGGAGAGCGACCCACGGCTTGCAGTTTCAGCAAGTTTCTTTTCCACCCGTTTCATTGGACCTTGCATGGTTCGGTGGACCATTCGCGGATGTCCGAGTATGCGATGAGCCTGGATTACGACCTgc                                                                                                                                                 >  6:148621/1‑149 (MQ=255)
        atatCCTCTTCCTTGCCGGAGAGCGACGCACGGCTTGCAGTTTCAGCAAGTTTCTTTTCCACCCGTTTCATTGGACCTTGCATGGTTCGGTGGACCATTCGCGGATGTCCGAGTATGCGATGAGCCTGGATTACGACCTGCGCCTGTAt                                                                                                                                         <  3:290558/149‑1 (MQ=255)
               ctTCCTTGCCGGAGAGCGACGCACGGCTTGCAGTTTCAGCAAGTTTCTTTTCCACCCGTTTCATTGGACCTTGCATGGTTCGGTGGCCCATTCGCGGATGTCCGAGTATGCGATGAGCCTGGATTACGACCTGCGCCTGTATgcg                                                                                                                                      >  3:211583/1‑145 (MQ=255)
                   cTTGCCGGAGAGCGACGCACGGCTTGCAGTTTCAGCAAGTTTCTTTTCCACCCGTTTCATTGGACCTTGCATGGTTCGGTGGACCATTCGCGGATGTCCGAGTATGCGATGAGCCTGGATTACGACCTGCGCCTGTATGCGCAGATCGt                                                                                                                              >  5:3407/1‑149 (MQ=255)
                    ttGCCGGAGAGCGACGCACGGCTTGCAGTTTCAGCAAGTTTCTTTTCCACCCGTTTCATTGGACCTTGCATGGTTCGGTGTACCATTCGCGGATGTCCGAGTATGCGATGAGCCTGGATTACGACCTGAGCCTGTATGCGCAGATCGTg                                                                                                                             >  4:145463/1‑149 (MQ=255)
                       ccGGAGAGCGACGCACGGCTTGCAGTTTCAGCAAGTTTCTTTTCCACCCGTTTCATTGGACCTTGCATGGTTCGGTGGACCATTCGCGGATGTCCGAGTATGCGATGAGCCTGGATTACGACCTGCGCCTGTATGCGCAGATCGTGGCg                                                                                                                          >  7:194941/1‑149 (MQ=255)
                        cGGAGAGCGACGCACGGCTTGCAGTTTCAGCAAGTTTCTTTTCCACCCGTTTCATTGGACCTTGCATGGTTCGGTGGACCATTCGCGGATGTCCGAGTATGCGATGAGCCTGGATTACGACCTGCGCCTGTATGCGCAGATCGTGGCgg                                                                                                                         <  6:3407/149‑1 (MQ=255)
                                 aCGCACGGCTTGCAGTTTCAGCAAGTTTCTTTTCCACCCGTTTCATTGGACCTTGCATGGTTCGGTGGACCATTCGCGGATGTCCGAGTATGCGATGAGCCTGGATTACGACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACg                                                                                                                >  6:120297/1‑148 (MQ=255)
                                   gCACGGCTTGCAGTTTCAGCAAGTTTCTTTTCCACCCGTTTCATTGGACCTTGCATGGTTCGGTGGACCATTCGCGGATGTCCGAGTATGCGATGAGCCTGGATTACGACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGa                                                                                                               >  1:59400/1‑147 (MQ=255)
                                         cTTGCAGTTTCAGCAAGTTTCTTTTCCACCCGTTTCATTGGACCTTGCATGGTTCGGTGGACCATTCGAGGATGTCCGAGTATGCGATGAGCCTGGATTACGACCTGCGCCTGTATGCGCAGATAGTGGCGGAGCGCACGAAAGGcgcg                                                                                                       >  5:339718/1‑149 (MQ=255)
                                                tttCAGCAAGTTTCTTTTCCCCCCGTTTCATTCGACCATGCATGGTTCGGTGGACCAGTGGCGGAAGTCCGAGTATGCGATGAGCCTGGATTACGACCTGCGCCAGTATGCGCAGATCGAGCCGGAGCGCACGAAAGGCGCGGCCGAgg                                                                                                >  8:245685/1‑149 (MQ=255)
                                                tttCAGCAAGTTTCTTTTCCACCCGTTTCATTGGACCTTGCATGGTTCGGTGGACCATTCGCGGATGTCCGAGTATGCGATGAGCCTGGATTACGACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAgg                                                                                                >  8:191754/1‑149 (MQ=255)
                                                    aGCAAGTTTCTTTTCCACCCGTTTCATTGGACCTTGCATGGTTCGGTGGACCATTCGCGGATGTCCGAGTATGCGATGAGCCTGGATTACGACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGttt                                                                                             <  2:4340/148‑1 (MQ=255)
                                                     gCAAGTTTCTTTTCCACCCGTTTCATTGGACCTTGCATGGTTCGGTGGACCATTCGCGGATGTCCGAGTATGCGATGAGCCTGGATTACGACCTGCGCCTGTATGCGCAGATCGTGTCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTg                                                                                           >  1:98825/1‑149 (MQ=255)
                                                     gCAAGTTTCTTTTCCACCCGTTTCATTGGACCTTGCATGGTTCGGTGGACCATTCGCGGATGTCCGAGTATGCGATGAGCCTGGATTACGACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTg                                                                                           >  1:194272/1‑149 (MQ=255)
                                                     gCAAGTTTCTTTTCCACCCGTTGCTTTGGACCTTGGATGCTTCGGTGGACCTTTCGCGGATGTCCGAGTATGCGATGAGCCTGGATTACGCCCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTg                                                                                           <  6:240750/149‑1 (MQ=255)
                                                     gCAAGTTTCTTTTCCACCCATTTCATTGGACCTTGCATGGTTCGGTGGACCATTCGCGGATGTCCGAGTATGCGATGAGCCTGGATTACGACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTg                                                                                           >  6:88652/1‑149 (MQ=255)
                                                      cAAGTTTCTTTTCCACCCGTTTCATTGGACCTTGCATGGTTCGGTGGACCATTCGCGGATGTCCGAGTATGCGATGAGCCTGGATTACGACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTgg                                                                                          >  5:179743/1‑149 (MQ=255)
                                                       aattttCTTTTCCACCCGTTTCATTGGACCTTGCATGGTTCGGTGGACCATTCGCGGATGTCCGAGTATGCGATGAGCCTGGATTACGACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTGGa                                                                                         <  5:148621/146‑1 (MQ=255)
                                                       aaGTTTCTTTTCCACCCGTTTCATTGGACCTTGCATGGTTCGGTGGACCATTCGCGGATGTCCGAGTATGCGATGAGCCTGGATTACGACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTGGa                                                                                         <  5:148617/149‑1 (MQ=255)
                                                          tttCTTTTCCACCCGTTTCATTGGACCTTGCATGGTTCGGTGGACCATTCGCGGATGTCCGAGTATGCGATGAGCCTGGATTACGACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTGGATg                                                                                       >  2:32271/1‑148 (MQ=255)
                                                          tttCTTTTCCACCCGTTTCATTGGACCTTGCATGGTTCGGTGGACCATTCGCGGATGTCCGAGTATGCGATGAGCCTGGATTACGACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTGGATg                                                                                       >  8:278092/1‑148 (MQ=255)
                                                            tCTTTTCCACCCGTTTCATTGGACCTTGCATGGTTCGGTGGACCATTCGCGGATGTCCGAGTATGCGATGAGCCTGGATTACGACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTGGATGtt                                                                                     <  2:194272/148‑2 (MQ=255)
                                                             cTTTTCCACCCGTTTCATTGGACCTTGCATGGTTCGGTGGACCATTCGCGGATGTCCGAGTATGCGATGAGCCTGGATTACGACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTgg                                                                                          >  7:314816/1‑142 (MQ=255)
                                                             cTTTTCCACCCGTTTCATTGGACCTTGCATGGTTCGGTGGACCATTCGCGGATGTCCGAGTATGCGATGAGCCTGGATTACGACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTgg                                                                                          <  8:314816/142‑1 (MQ=255)
                                                                ttCCACCCGTTTCATTGGACCTTGCATGGTTCGGTGGACCATTCGCGGATGTCCGAGTATGCGATGAGCCTGGATTACGACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTGGATGTAcc                                                                                   <  2:98825/146‑1 (MQ=255)
                                                                          ttCATTGGACATTTCATGGTTCGGTGTACCATTCGCTGATGTCCGAGTATGCGATGAGCCTGGATTACGACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTGGATGTACCGCGTTATCTAAt                                                                       <  6:339718/148‑1 (MQ=255)
                                                                             aTTGGACCTTGCATGGTTCGGTGGACCATTCGCGGATGTCCGAGTATGCGATGAGCCTGGATTACGACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTGGATGTACCGCGTTATCTAATGGcc                                                                   >  4:49992/1‑149 (MQ=255)
                                                                                ggACCTTGCATGGTTCGGTGGACCATTCGCGGATGTCCGAGTATGCGATGAGCCTGGATTACGACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTGGATGTACCGCGTTATCTAATGGCCTa                                                                 <  5:88652/148‑1 (MQ=255)
                                                                                      tGCATGGTTCGGTGGACCATTCGCGGATGTCCGAGTATGCGATGAGCCTGGATTACGACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTGGATGTACCGCGTTATCTAATGGCCTATCCAAg                                                           >  7:39317/1‑148 (MQ=255)
                                                                                         aTGGTTCGGTGGACCATTCGCGGATGTCCGAGTATGCGATGAGCCTGGATTACGACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGtttt                                                                                            <  2:216502/112‑1 (MQ=255)
                                                                                         aTGGTTCGGTGGACCATTCGCGGATGTCCGAGTATGCGATGAGCCTGGATTACGACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTGGATGTACCGCGTTATCTAATGGCCTATCCAAGGATa                                                       >  8:242978/1‑149 (MQ=255)
                                                                                         aTGGTTCGGTGGACCATTCGCGGATGTCCGAGTATGCGATGAGCCTGGATTACGACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTGGATGTACCGCGTTATCTAATGGCCTATCCAAGGATa                                                       >  8:125772/1‑149 (MQ=255)
                                                                                                        aTTCGCGGATGTCCGAGTATGCGATGAGCCTGGATTACGACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTGGATGTACCGCGTTATCTAATGGCCTATCCAAGGATACTGGCGCCGCGGGAg                                        >  3:168959/1‑149 (MQ=255)
                                                                                                             cgGATGTCCGAGTATGCGATGAGCCTGGATTACGACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTGGATGTACCGCGTTATCTAATGGCCTATCCAAGGATACTGGCGCCGCGGGAGGCGCt                                   <  2:59400/149‑1 (MQ=255)
                                                                                                               gATGTCCGAGTATGCGATGAGCCTGGATTACGACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTGGATGTACCGCGTTATCTAATGGCCTATCCAAGGATACTGGCGCCGCGGGAGGCGCTgg                                 <  8:39317/149‑1 (MQ=255)
                                                                                                                      gAGTATGCGATGAGCCTGGATTACGACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTGGATGTACCGCGTTATCTAATGGCCTATCCAAGGATACTGGCGCCGCGGGAGGCGCTGGAAAACgg                          <  7:242978/149‑1 (MQ=255)
                                                                                                                        gTATGCGATGAGCCTGGATTACGACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTGGATGTACCGCGTTATCTAATGGCCTATCCAAGGATACTGGCGCCGCGGGAGGCGCTGGAAAACGGga                        <  7:94349/149‑1 (MQ=255)
                                                                                                                            gtgATGAGCCTGGATTACGACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTGGATGTACCGCGTTATCTAATGGCCTATCCAAGGATACTGGCGCCGCGGGAGGCGCTGGAAAACGGgatgat                    >  8:89387/3‑149 (MQ=255)
                                                                                                                              gATGAGCCTGGATTACGACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTGGATGTACCGCGTTATCTAATGGCCTATCCAAGGATACTGGCGCCGCGGGAGGCGCTGGAAAACGGgatgat                    <  6:179792/147‑1 (MQ=255)
                                                                                                                              gATGAGCCTGGATTACGACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTGGATGTACCGCGTTATCTAATGGCCTATCCAAGGATACTGGCGCCGCGGGAGGCGCTGGAAAACGGGATGATcc                  <  3:229802/149‑1 (MQ=255)
                                                                                                                              gATGAGCCTGGATTACGACCTGCGCCTGTATGCGCAGATCGTCGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTGGATGTACCGCGTTATCTAATGGCCTATCCAAGCATACTGGCGCCGCGGGAGGCGCTGGAAAACGGgatgat                    >  5:179792/1‑147 (MQ=255)
                                                                                                                               aTGAGCCTGGATTACGACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTGGATGTACCGCGTTATCTAATGGCCTATCCAAGGATACTGGCGCCGCGGGAGGCGCTGGAAAACGGGATGATCCa                 >  7:36502/1‑149 (MQ=255)
                                                                                                                                tGAGCCTGGATTACGACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTGGATGTACCGCGTTATCTAATGGCCTATCCAAGGATACTGGCGCCGCGGGAGGCGCTGGAAAACGGGATGATCCAt                <  6:179743/149‑1 (MQ=255)
                                                                                                                                  aGCCTGGATTACGACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTGGATGTACCGCGTTATCTAATGGCCTATCCAAGGATACTGGCGCCGCGGGAGGCGCTGGAAAACGGGATGATCCATg               <  7:89387/148‑1 (MQ=255)
                                                                                                                                    gcttgATTACGACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTGGATGTACCGCTTTATCTAATGGCCTATCCAAGGATACTGGCGCCGCGGGAGGCGCTGGAAAACGGGATGATCCATGaaa            <  7:278092/145‑1 (MQ=255)
                                                                                                                                    ccTGGATTACGACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTGGATGTACCGCGTTATCTAATGGCCTATCCAAGGATACTGGCGCCGCGGGAg                                        <  3:243379/121‑1 (MQ=255)
                                                                                                                                    ccTGGATTACGACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTGGATGTACCGCGTTATCTAATGGCCTATCCAAGGATACTGGCGCCGCGGGAg                                        >  4:243379/1‑121 (MQ=255)
                                                                                                                                     cTGGATTACGACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTGGATGTACCGCGTTATCTAATGGCCTATCCAAGGATACTGGCGCCGCGGGAGGCGCTGGAAAACGGGATGATCCATGAAAt           >  6:31285/1‑149 (MQ=255)
                                                                                                                                      tccgccaCGATCTGCGCATACAGGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTGGATGTACCGCGTTATCTAATGGCCTATCCAAGGATACTGGCGCCGCGGGAGGCGCt                                   <  6:289636/118‑1 (MQ=38)
                                                                                                                                      tccgccaCGATCTGCGCATACAGGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTGGATGTACCGCGTTATCTAATGGCCTATCCAAGGATACTGGCGCCGCGGGAGGCGCt                                   >  5:289636/7‑124 (MQ=38)
                                                                                                                                        gATTACGACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTGGATGTACCGCGTTATCTAATGGCCTATCCAAGGATACTGGCGCCGCGGGAGGCGCTGGAAAACGGGATGATCCATGAAATcga        <  3:145463/149‑1 (MQ=255)
                                                                                                                                           caCGATCTGCGCATACAGGCGCAGGTCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTGGATGTACCGCGTTATCTAATGGCCTATCCAAGGATACTGGCGCCGCGGGAGGCGCTGGAAAACGGGATGATCCATGAAATcgacga     <  4:35671/148‑1 (MQ=255)
                                                                                                                                           caCGATCTGCGCATACAGGCGCAGGTCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTGGATGTACCGCGTTATCTAATGGCCTATCCAAGGATACTGGCGCCGCGGGAGGCGCTGGAAAACGGGATGATCCATGAAATcgac       >  3:35671/2‑147 (MQ=255)
                                                                                                                                            aCGACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTGGATGTACCGCGTTATCTAATGGCCTATCCAAGGATACTGGCGCCGCGGGAGGCGCTGGAAAACGGGATGATCCATGAAATcgacga     <  7:125772/148‑1 (MQ=255)
                                                                                                                                              gACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCATCGAAAGGCGCGGCCGAGGTTTTGGATGTACCGCGTTATCTAATGGCCTATCCAAGGATACTGGCGCCGCGGGAGGCGCTGGAAAACGGGATGATCCATGAAATcgac       >  1:61260/1‑145 (MQ=255)
                                                                                                                                              gACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTGGATGTACCGCGTTATCTAATGGCCTATCCAAGGATACTGGCGCCGCGGGAGGCGCTGGAAAACGGGATGATCCATGAAATCGACGAGAt  >  6:281293/1‑149 (MQ=255)
                                                                                                                                              gACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTGGATGTACCGCGTTATCTAATGGCCTATCCAAGGATACTGGCGCCGCGGGAGGCGCTGGAAAACGGGATGATCCATGAAATCGACGAGAt  >  2:265264/1‑149 (MQ=255)
                                                                                                                                                |                                                                                                                                                   
CATGGGCAATATCCTCTTCCTTGCCGGAGAGCGACGCACGGCTTGCAGTTTCAGCAAGTTTCTTTTCCACCCGTTTCATTGGACCTTGCATGGTTCGGTGGACCATTCGCGGATGTCCGAGTATGCGATGAGCCTGGATTACGACCTGCGCCTGTATGCGCAGATCGTGGCGGAGCGCACGAAAGGCGCGGCCGAGGTTTTGGATGTACCGCGTTATCTAATGGCCTATCCAAGGATACTGGCGCCGCGGGAGGCGCTGGAAAACGGGATGATCCATGAAATCGACGAGAT  >  NC_002947/3701834‑3702124

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: