Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,733,265 T→A 8.2% intergenic (‑25/‑47) PP_3299 ← / → PP_3300 lipoprotein/Transcriptional regulator, tetR family

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,733,2650TA 8.2% 170.0 / 5.9 61intergenic (‑25/‑47)PP_3299/PP_3300lipoprotein/Transcriptional regulator, tetR family
Reads supporting (aligned to +/- strand):  ref base T (28/28);  new base A (3/2);  total (31/30)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.29e-01

CGACGTAATGATCGGCCAGCGCAACCTCTGGCTGTTTATAATCCGGGCCAACCATGCACCCTGCAGTGAGACTGGCGCTCAACAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGG  >  NC_002947/3733117‑3733413
                                                                                                                                                    |                                                                                                                                                     
cgACGTAATGATCGGCCAGCGCAACCTCTGGCTGTTTATAATCCGGGCCAACCATGCACCCTGCAGTGAGACTGGCGCTCAACAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCatat                                                                                                                                                       >  2:306474/1‑149 (MQ=255)
    gTAATGATCGGCCAGCGCAACCTCTGGCTGTTTATAATCCGGGCCAACCATGCACCCTGCAGTGAGACTGGCGCTCAACAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCatattata                                                                                                                                                   <  1:326665/149‑1 (MQ=255)
             ggCCAGCGCAACCTCTGGCTGTTTATAATCCGGGCCAACCATGCACCCTGCAGTGAGACTGGCGCTCAACAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTca                                                                                                                                          >  5:200633/1‑149 (MQ=255)
               ccAGCGCAACCTCTGGCTGTTTATAATCCGGGCCAACCATGCACCCTGCAGTGAGACTGACGCTCAACAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCAAAATATAATATGGTcaca                                                                                                                                        <  2:86488/149‑1 (MQ=255)
                     cAACCTCTGGCTGTTTATAATCCGGGCCAACCATGCACCCTGCAGTGAGACTGGCGCTCAACAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGt                                                                                                                                  <  1:306474/149‑1 (MQ=255)
                      aaCCTCTGGCTGTTTATAATCCGAGCCAACCATGCACCCTGCAGTGAGACTGGCGCTCAACAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGt                                                                                                                                  >  1:63635/1‑148 (MQ=255)
                       aCCTCTGGCTGTTTATAATCCGGGCCAACCATGCACCCTGCAGTGAGACTGGCGCTCAACAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTc                                                                                                                                 >  4:109262/1‑148 (MQ=255)
                         ctctGGCTGTTTATAATCCGGGCCAACCATGCACCCTGCAGTGAGACTGGCGCTCAACAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAAt                                                                                                                              <  3:153505/149‑1 (MQ=255)
                         ctctGGCTGTTTATAATCCGGGCCAACCATGCACCCTGCAGTGAGACTGGCGCTCAACAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAAt                                                                                                                              <  8:117573/149‑1 (MQ=255)
                         ctctGGCTGTTTATAATCCGGGCCAACCATGCACCCTGCAGTGAGACTGGCGCTCAACAGCAGAGCAATCGCTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAAt                                                                                                                              <  2:101749/149‑1 (MQ=255)
                            tGGCTGTTTATAATCCGGCCCAACCATGCACCCTGCAGTGAGACTGTCGCTCAACATCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCa                                                                                                                            <  5:343092/148‑1 (MQ=255)
                                  tttATAATCCGGGCCAACCATGCACCCTGCAGTGAGACTGGCGCTCAACAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACActct                                                                                                                                    <  5:251884/134‑1 (MQ=255)
                                  tttATAATCCGGGCCAACCATGCACCCTGCAGTGAGACTGGCGCTCAACAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACActct                                                                                                                                    >  6:251884/1‑134 (MQ=255)
                                         tacGGGCCAACCATGCACCCTGCAGTGAGACTGGCGCTCAACAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCtt                                                                                                              <  8:112347/147‑1 (MQ=255)
                                         tCCGGGCCAACCATGCACCCTGCAGTGAGACTGGCGCTCAACAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTAGGTCACACTCTGTCAATCAGTTCCAGGATGCtt                                                                                                              >  3:299780/1‑149 (MQ=255)
                                           cgtgCCAACCATGCACCCTGCAGTGAGACTGGCGCTCAACAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCa                                                                                                            <  5:115232/146‑1 (MQ=255)
                                               ccAACCATGCACCCTGCAGTGAGACTGGCGCTCAACAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCa                                                                                                                      <  6:187361/135‑1 (MQ=255)
                                               ccAACCATGCACCCTGCAGTGAGACTGGCGCTCAACAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCa                                                                                                                      >  5:187361/1‑135 (MQ=255)
                                               ccAACCATGCACCCTGCAGTGAGACTGGCGCTCAACAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCaaaaa                                                                                                        >  4:10650/1‑149 (MQ=255)
                                                 aaCCATGCACCCTGCAGTGAGACTGGCGCTCAACAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAAt                                                                                                       >  6:15492/1‑148 (MQ=255)
                                                 aaCCATGCACCCTGCAGTGAGACTGGCGCTCAACAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAAt                                                                                                       >  6:70650/1‑148 (MQ=255)
                                                  aCCATGCACCCTGCAGTGAGACTGGCGCTCAACAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCGGGAt                                                                                                                  <  2:243032/136‑1 (MQ=255)
                                                  aCCATGCACCCTGCAGTGAGACTGGCGCTCAACAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCGGGAt                                                                                                                  >  1:243032/1‑136 (MQ=255)
                                                  aCCATGCACCCTGCAGTGAGACTGGCGCTCAACAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGa                                                                                                     <  3:109262/149‑1 (MQ=255)
                                                    cATGCACCCTGCAGTGAGACTGGCGCTCAACAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGt                                                                                                   <  5:70650/149‑1 (MQ=255)
                                                      tGCACCCTGCAGTGAGACTGGCGCTCAACAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCTAAAATGAGTa                                                                                                  >  7:125660/1‑148 (MQ=255)
                                                           ccTGCAGTGAGACTGGCGCTCAACAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTca                                                                                                                                          <  3:75979/103‑1 (MQ=255)
                                                           ccTGCAGTGAGACTGGCGCTCAACAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTca                                                                                                                                          >  4:75979/1‑103 (MQ=255)
                                                            cTGCAGTGAGACTGGCGCTCAACAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTa                                                                                                  >  5:221157/1‑142 (MQ=255)
                                                            cTGCAGTGAGACTGGCGCTCAACAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTa                                                                                                  <  6:221157/142‑1 (MQ=255)
                                                               cAGTGAGACTGGCGCTCAACAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTcc                                                                                       <  3:6438/149‑1 (MQ=255)
                                                               cAGTGAGACTGGCGCTCAACAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTAGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTcc                                                                                       <  4:299780/149‑1 (MQ=255)
                                                                            gcTCAACAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGgcg                                                                          >  5:239298/1‑149 (MQ=255)
                                                                              tCAACAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCGCCACCCTCGCCGgcgcg                                                                        >  6:82364/1‑149 (MQ=255)
                                                                                aaCAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGcgcgcg                                                                      >  8:160765/1‑149 (MQ=255)
                                                                                aaCAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGcgcgcg                                                                      <  6:239298/149‑1 (MQ=255)
                                                                                    gcagAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAAt                                                                                                                              >  7:136008/1‑90 (MQ=255)
                                                                                    gcagAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAAt                                                                                                                              <  8:136008/90‑1 (MQ=255)
                                                                                             tCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCATCGCCGGCGCGCGGGCCAGCCGACCa                                                         >  3:66314/1‑149 (MQ=255)
                                                                                              cGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCac                                                        >  5:288498/1‑149 (MQ=255)
                                                                                                    gTATGGAATCATTATGAATCTCATAGAACAATACGATGTGTGACCATATTATATTTTGGTCAAAATCTGTCAATCATTTCCAGGATGCTTCAAAAATGATTAAATACTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGt                                                   <  1:65763/149‑1 (MQ=255)
                                                                                                       gggAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAgg                                               <  3:10650/149‑1 (MQ=255)
                                                                                                           aGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGgatc                                           <  6:224363/149‑1 (MQ=255)
                                                                                                              atgatgATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGgatcaga                                        <  5:15492/149‑1 (MQ=255)
                                                                                                                  tgatTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGgatcagatca                                     <  6:200633/148‑1 (MQ=255)
                                                                                                                   gatTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGa                                                            >  4:24797/1‑124 (MQ=255)
                                                                                                                   gatTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGatcatc                                   >  6:319761/1‑149 (MQ=255)
                                                                                                                     ttCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGatcatc                                   >  2:323770/1‑147 (MQ=255)
                                                                                                                        tcATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGc                              >  7:13590/1‑149 (MQ=255)
                                                                                                                          aTAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTg                            >  6:179850/1‑149 (MQ=255)
                                                                                                                          aTAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTg                            >  5:251459/1‑149 (MQ=255)
                                                                                                                             gACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCa                         >  8:118811/1‑149 (MQ=255)
                                                                                                                                 aaGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATTCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGa                     <  6:251459/149‑1 (MQ=255)
                                                                                                                                   gaggagGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGc                   <  2:63635/149‑1 (MQ=255)
                                                                                                                                        agtgtGACCAAAATATAATATGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACACTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCAAGGCTCCCATGCAGCACtac              >  8:258100/2‑147 (MQ=255)
                                                                                                                                         gtgtGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTtctc                                                                                        <  3:5245/74‑1 (MQ=255)
                                                                                                                                         gtgtGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTtctc                                                                                        >  4:5245/1‑74 (MQ=255)
                                                                                                                                         gtgtGACCAAAATATAATATGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGc                              >  7:172936/1‑132 (MQ=255)
                                                                                                                                         gtgtGACCAAAATATAATATGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGc                              <  8:172936/132‑1 (MQ=255)
                                                                                                                                          tgtgACCAAAATATAATATGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGTTGCCATGGAGCACTTCGc            >  7:62737/1‑149 (MQ=255)
                                                                                                                                              aCCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCAt        <  6:288498/149‑1 (MQ=255)
                                                                                                                                              aCCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCAt        >  6:202317/1‑149 (MQ=255)
                                                                                                                                                cATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTa      <  1:323770/149‑1 (MQ=255)
                                                                                                                                                    ttatattTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCGATTATggg  >  3:140690/1‑149 (MQ=255)
                                                                                                                                                    ttatattTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATggg  >  3:318600/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
CGACGTAATGATCGGCCAGCGCAACCTCTGGCTGTTTATAATCCGGGCCAACCATGCACCCTGCAGTGAGACTGGCGCTCAACAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGG  >  NC_002947/3733117‑3733413

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: