| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,047,209 | A→G | 7.6% | intergenic (+22/‑241) | PP_3568 → / → quiA | hypothetical protein/quinate dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,047,209 | 0 | A | G | 7.6% | 187.8 / 3.8 | 68 | intergenic (+22/‑241) | PP_3568/quiA | hypothetical protein/quinate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base A (29/33); new base G (3/2); total (33/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.64e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCGCCGGGCGATTGTCTGGACATCCCCCCGCACGACCGCCACCGCGTGGAATGGACCGCGCCCGGCACGGCCACCATCTGGCTCGCGGTGTTCTATAGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAATACAAATCGAAGACGCGTCATAAACGCCTCGTTCAATGCGTTTTTCAGCACCTTATCTATACTTTTGGCCACATCTTCGTAAGTTCAGCCCT > NC_002947/4047065‑4047356 | gcgcCGGGCGATTGTCTGGACATCCCCCCGCACGACCGCCACCGCGTGGAATGGACCGCGCCCGGCACGGCCACCATCTGGCTCGCGGTGTTCTATAGCAGCAGCACCCCATGGCCTCCCTGAAGGGGCCATGCCTGCCCGTGCACaa < 6:257767/148‑1 (MQ=255)gcgcCGGGCGATTGTCTGGACATACCACCGCACGACCCCCACCGCGTGGAATGGACCGCGCCCGGCACGGCCACCATCTGGCTCGCGGTGTTCTATAGCAGCAGCACCCCATGGCCAGCCTGAACGGGCCATGCCTCCCCGTGCACAAg > 4:43098/1‑149 (MQ=255) gcCGGGCGATTGTCTGGACATCCCCCCGCACGACCGCCACCGCGTGGAATGGACCGCGCCCGGCACGGCCACCATCTGGCTCGCGGTGTTCTATAGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGgc < 5:312575/149‑1 (MQ=255) gggCGATTGTCTGGACATCCCCCCGCACGACCGCCACCGCGTGGAATGGACCGCGCCCGGCACGGCCACCATCTGGCTCGCGGTGTTCTATAGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCa < 5:39332/149‑1 (MQ=255) gggCGATTGTCTGGACATCCCCCCGCACGACCGCCACCGCGTGGAATGGACCGCGCCCGGCACGGCCACCATCTGGCTCGCGGTGTTCTATAGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCa < 6:43498/149‑1 (MQ=255) ggCGATTGTCTGGACATCCCCCCGCACGACCGCCACCGCGTGGAATGGACCGCGCCCGGCACGGCCACCATCTGGCTCGCGGTGTTCTATAGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAg < 1:214413/149‑1 (MQ=255) aTCCCCCCGCACGACCGCCACCGCGTGGAATGGACCGCGCCCGGCACGGCCACCATCTGGCTCGCGGTGTTCTATAGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGt > 3:184355/1‑149 (MQ=255) aTCCCCCCGCACGACCGCCACCGCGTGGAATGGACCGCGCCCGGCACGGCCACCATCTGGCTCGCGGTGTTCTATAGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGt > 1:94133/1‑149 (MQ=255) ccccccGCACGACCGCCACCGCGTGGAATGGACCGCGCCCGGCACGGCCACCATCTGGCTCGCGGTGTTCTATAGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTg > 2:68172/1‑148 (MQ=255) cccccGCACGACCGCCACCGCGTGGAATGGACCGCGCCCGGCACGGCCACCATCTGGCTCGCGGTGTTCTATAGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGc > 4:175669/1‑148 (MQ=255) ccccGCACGACCGCCACCGCGTGGAATGGACCGCGCCCGGCACGGCCACCATCTGGCTCGCGGTGTTCTATAGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCGCAAGGCGCAGTTGTCCCGTCGCCGTGc > 3:143883/1‑147 (MQ=255) ccccGCACGACCGCCACCGCGTGGAATGGACCGCGCCCGGCACGGCCACCATCTGGCTCGCGGTGTTCTATAGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCGCAAGGCGCAGTTGTCCCGTCGCCGTGc > 3:138917/1‑147 (MQ=255) ccccGCACGACCGCCACCGCGTGGAATGGACCGCGCCCGGCACGGCCACCATCTGGCTCGCGGTGTTCTATAGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCaa < 1:122954/149‑1 (MQ=255) ccccGCACGACCGCCACCGCGTGGAATGGACCGCGCCCGGCACGGCCACCATCTGGCTCGCGGTGTTCTATAGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCaa < 2:318476/149‑1 (MQ=255) cccGCACGACCGCCACCGCGTGGAATGGACCGCGCCCGGCACGGCCACCATCTGGCTCGCGGTGTTCTATAGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAg > 6:44880/1‑149 (MQ=255) cACGACCGCCACCGCGTGGAATGGACCGCGCCCGGCACGGCCACCATCTGGCTCGCGGTGTTCTATAGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTg < 7:70071/149‑1 (MQ=255) aCGACCGCCACCGCGTGGAATGGACCGCGCCCGGCACGGCCACCATCTGGCTCGCGGTGTTCTATAGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTgg > 1:66106/1‑149 (MQ=255) cGACCGCCACCGCGTGGAATGGACCGCGCCCGGCACGGCCACCATCTGGCTCGCGGTGTTCTATAGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTggg < 3:214069/149‑1 (MQ=255) gCCACCGCGTGGAATGGACCGCGCCCGGCACGGCCACCATCTGGCTCGCGGTGTTCTATAGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCTTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGTCTTAc < 2:250732/149‑1 (MQ=255) aCCGCGTGGAATGGACCGCGCCCGGCACGGCCACCATCTGGCTCGCGGTGTTCTATAGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGAc < 3:175669/149‑1 (MQ=255) ccGCGTGGAATGGACCGCGCCCGGCACGGCCACCATCTGGCTCGCGGTGTTCTATAGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGAc > 6:183159/1‑148 (MQ=255) gAATGGACCGCGCCCGGCACGGCCACCATCTGGCTCGCGGTGTTCTATAGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTCTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGAAt > 4:189204/1‑149 (MQ=255) ggACCGCGCCCGGCACGGCCACCATCTGGCTCGCGGCGTTCTATAGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGGCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAAt < 7:218654/149‑1 (MQ=255) gACCGCGCCCGGCACGGCCACCATCTGGCTCGCGGTGTTCTATAGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAAt < 4:184355/148‑1 (MQ=255) aCCGCGCCCGGCACGGCCACCATCTGGCTCGCGGTGTTCTATAGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCGCAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAATa > 3:75361/1‑148 (MQ=255) ccGCGCCCGGCACGGCCACCATCTGGCTCGCGGTGTTCTATAGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAATACa < 7:270604/149‑1 (MQ=255) cgcgCCCGGCACGGCCACCATCTGGCTCGCGGTGTTCTATAGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAATACaa < 4:87932/149‑1 (MQ=255) cGGCACGGCCACCATCTGGCTCGCGGTGTTCTATAGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAATACAAATCg > 5:98091/1‑147 (MQ=255) cGGCACGGCCACCATCTGGCTCGCGGTGTTCTATAGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAATACAAATCGaa < 6:13025/149‑1 (MQ=255) cACGGCCACCATCTGGCTCGCGGTGTTCTATAGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTggg > 4:62035/1‑116 (MQ=255) cACGGCCACCATCTGGCTCGCGGTGTTCTATAGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTggg < 3:62035/116‑1 (MQ=255) ccaccaTCTGGCTCGCGGTGTTCTATAGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAATACAAATCGAAGACGCGt > 3:6360/1‑148 (MQ=255) cacccTCTGGCTCGCGGTGTTCTATAGCAGCAGCCCCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAATACAAATCGAAGACGCGTCa > 1:189153/1‑149 (MQ=255) accaTCTGGCTCGCGGTGTTCTATAGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAATACAAATCGAAGACGCGTCAt < 5:183159/149‑1 (MQ=255) ccaTCTGGCTCGCGGTGTTCTATAGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAATACAAATCGaa > 7:297677/1‑138 (MQ=255) ccaTCTGGCTCGCGGTGTTCTATAGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAATACAAATCGaa < 8:297677/138‑1 (MQ=255) tCTGGCTCGCGGTGTTCTATAGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAAt > 8:30853/1‑125 (MQ=255) tCTGGCTCGCGGTGTTCTATAGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAAt < 7:30853/125‑1 (MQ=255) gCTCGCGGTGTTCTATAGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAATACAAATCGAAGACGCGTCATAAACGc < 5:44880/147‑1 (MQ=255) gcgGTGTTCTATAGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAATACAAATCGAAGACGCGTCATAAACGCCTCGtt < 3:58215/149‑1 (MQ=255) gcgGTGTTCTATAGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAATACAAATCGAAGACGCGTCATAAACGCCTCGtt < 1:200900/149‑1 (MQ=255) cTATAGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAATACAAATCGAAGACGCGTCATAAACGCCTCGTTCAATGCGt > 7:168430/1‑149 (MQ=255) tataGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAATACAAATCGAAGACGCGTCATAAACGCCTCGTTCAATGCGtt > 8:51737/1‑149 (MQ=255) ataGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCTCAAGGCGCAGTTGTGCCGTCGCCGTGCAAGGTTGGGGTTACGGCCAAAGCAGGATTTCAAATCGATGACGCGTCATAAACGCGTCGTTGATTGCGttt > 2:185235/1‑149 (MQ=255) ataGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAATACAAATCGAAGACGCGTCAt > 1:146324/1‑127 (MQ=255) ataGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAATACAAATCGAAGACGCGTCAt < 2:146324/127‑1 (MQ=255) taGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCGGTCGGCGTGCAAGGTTGGGCTTACGACCAAAGCATGAATACAAATCGAAGACGCGTCATAAACGCCTCGTTCAATGCGttt < 3:43098/148‑1 (MQ=255) taGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCAGGAATACAAATCGAAGACGCGTCATAAACGCCTCGTTCAATGCGtttt > 3:285311/1‑149 (MQ=255) gcagcagcaCCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAATACAAATCGAAGACGCGTCATAAACGCCTCGTTCAATGCGttttt < 1:68172/148‑1 (MQ=255) gcagcagcaCCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAATACAAATCGAAGACGCGTCATAAACGCCTCGTTCAATGCGttttt > 3:121249/1‑148 (MQ=255) cagcagcaCCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAATACAAATCGAAGACGCGTCATAAACGCCTCGTTCAATGCGTTTTTCa < 3:189204/149‑1 (MQ=255) cagcaCCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAATACAAATCGAAGACGCGTCATAAACGCCTCGTTCAATGCGTTTTTCAGCa < 4:6360/149‑1 (MQ=255) gcaCCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACTACCAAAGCATGAATACAAATCGAAGACGCGTCATAAACGCCTCGTTCAATGCGTTTTTCAGCAcc < 2:66106/149‑1 (MQ=255) aCCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAATACAAATCGAAGACGCGTCATAAACGCCTCGTTCAATGCGTTTTTCAGCACCt > 1:204035/1‑148 (MQ=255) aCCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAATACAAATCGAAGACGCGTCATAAACGCCTCGTTCAATGCGTTTTTCAGCACCt > 8:141273/1‑148 (MQ=255) aCCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAATACAAATCGAAGACGCGTCATAAACGCCTCGTTCAATGCGGTTTTCAGCACCt > 8:117251/1‑148 (MQ=255) aTGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAATACAAATCGAAGACGCGTCATAAACGCCTCGTTCAATGCGTTTTTCAGCACCTTATCta < 2:94133/149‑1 (MQ=255) cctgcctgAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAATACAAATCGAAGACGCGTCATAAACGCCTCGTTCAATGCGTTTTTCAGCACCTTATCTATACt < 2:189153/149‑1 (MQ=255) ctgcctgAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAATACAAATCGAAGACGCGTCATAAACGCCTCGTTCAATGCGTTTTTCAGCACCTTATCTATACtt > 4:241316/1‑149 (MQ=255) tgAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAATACAAATCGAAGACGCGTCATAAACGCCTCGTTCAATGCGTTTTTCAGCACCTTATCTATACTTTTGGc > 5:134285/1‑149 (MQ=255) ggggCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAATACAAATCGAAGACGCGTCATAAACGCCTCGTTCAATGCGTTTTTCAGCACCTTATCTATACTTTTGGCcac > 6:3374/1‑148 (MQ=255) ggCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAATACAAATCGAAGACGCGTCATAAACGCCTCGTTCAAt < 4:7738/111‑1 (MQ=255) ggCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAATACAAATCGAAGACGCGTCATAAACGCCTCGTTCAAt > 3:7738/1‑111 (MQ=255) cATGCCTGCCCGTGCGCAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAATACAAATCGAAGACGCGTCATAAACGCCTCGTTCAATGCGTTTTTCAGCACCTTATCTATACTTTTGGCCACATCTTc < 4:138917/149‑1 (MQ=255) cATGCCTGCCCGTGCGCAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAATACAAATCGAAGACGCGTCATAAACGCCTCGTTCAATGCGTTTTTCAGCACCTTATCTATACTTTTGGCCACATCTTc < 4:143883/149‑1 (MQ=255) cATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAATACAAATCGAAGACGCGTCATAAACGCCTCGTTCAATGCGTTTTTCAGCACCTTAt < 2:40703/127‑1 (MQ=255) cATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAATACAAATCGAAGACGCGTCATAAACGCCTCGTTCAATGCGTTTTTCAGCACCTTAt > 1:40703/1‑127 (MQ=255) ccGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAATACAAATCGAAGACGCGTCATAAACGCCTCGTTCAATGCGTTTTTCAGCACCTTATCTATACTTTTGGCCACATCTTCGTAAGtt > 2:52619/1‑147 (MQ=255) cacaAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAATACAAATCGAAGACGCGTCATAAACGCCTCGTTCAATGCGTTTTTCAGCACCTTATCTATACTTTTGGCCACATCTTCGTAAGTTCAGCCCt > 7:165625/1‑149 (MQ=255) | GCGCCGGGCGATTGTCTGGACATCCCCCCGCACGACCGCCACCGCGTGGAATGGACCGCGCCCGGCACGGCCACCATCTGGCTCGCGGTGTTCTATAGCAGCAGCACCCCATGGCCTGCCTGAAGGGGCCATGCCTGCCCGTGCACAAGGCGCAGTTGTCCCGTCGCCGTGCAAGGTTGGGCTTACGACCAAAGCATGAATACAAATCGAAGACGCGTCATAAACGCCTCGTTCAATGCGTTTTTCAGCACCTTATCTATACTTTTGGCCACATCTTCGTAAGTTCAGCCCT > NC_002947/4047065‑4047356 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |