| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,156,141 | A→T | 13.7% | L217* (TTA→TAA) | PP_3659 ← | transcriptional regulator, AraC family |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,156,141 | 0 | A | T | 13.7% | 144.8 / 12.6 | 64 | L217* (TTA→TAA) | PP_3659 | transcriptional regulator, AraC family |
| Reads supporting (aligned to +/- strand): ref base A (29/26); new base T (5/4); total (34/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GGTGGAACTGGACATGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTGAGGAGGAC > NC_002947/4155993‑4156288 | ggTGGAACTGGACATGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTa < 5:284042/149‑1 (MQ=255) gAACTGGACCTGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCACTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTaaaaa < 6:219025/149‑1 (MQ=255) gAACTGGACATGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGGGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTaaaaa < 6:223882/149‑1 (MQ=255) cTGGACATGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGc < 8:217014/149‑1 (MQ=255) cATGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTTAAAAGGCacgcc < 6:320597/149‑5 (MQ=255) cTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAagag < 5:20371/148‑1 (MQ=255) gggCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGtt < 2:144307/149‑1 (MQ=255) ggCGAGCTCATAGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGttt < 7:246947/149‑1 (MQ=255) gCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTg < 5:307388/149‑1 (MQ=255) gAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACAGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGc < 2:284805/149‑1 (MQ=255) gCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCa > 7:87480/1‑148 (MQ=255) tCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCTTCTTTACGGTATTTCACAAGGAAGTTAATTGGCTTGCATTTTAAAAAGGAAGGAAGAGAAACGGGCGTTTGGaaaa > 3:211068/1‑148 (MQ=255) tCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAAc > 1:216956/1‑149 (MQ=255) aTCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCt > 2:75640/1‑149 (MQ=255) tCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTAGTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTGTGGCAAACCtt < 1:140240/149‑1 (MQ=255) aGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGc > 8:207049/1‑147 (MQ=255) gCCACGTGTGTGGAGAGAGCACTTTTAATCGCCGCCGGAACATAATGCACGTACTGTCGTCGAAACGGTATTACCCAAGGAACTTAATTGACGTGCCTTTTAAAAAGGAAGGAAGACAAACGGGCGTTTGGCAAACATTGAACGCCAg > 6:343610/1‑148 (MQ=255) gtgtgtGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACTGGCGTTTGGCAAACCTTGTACGCCAGAAAGct < 5:151684/149‑1 (MQ=255) tgGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCAGGGTTTAGGTATTTGAAAATGAAGTTAATTTGCGTGGCTTTTTAAAAGGCAGGAAGAGAAAAGGGCGTTTTGCAAAACGTGTAAGCCAGAAAGCtgttct > 1:249894/1‑149 (MQ=255) gagagaGCAGTTTTAATCGCCGCCGTATAATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGAAGTACGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTtctc < 1:75640/148‑1 (MQ=255) agCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCa > 6:161771/1‑93 (MQ=255) agCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCa < 5:161771/93‑1 (MQ=255) agCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAaca > 3:68533/1‑148 (MQ=255) tAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAATAAGGCAGGAAGAGAAACGGGAGTTTGTCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACAGAGCGGAg < 2:249894/148‑1 (MQ=255) tAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAg < 2:216956/148‑1 (MQ=255) aTCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGtt < 4:68533/149‑1 (MQ=255) ccgccgGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTAt < 8:87480/149‑1 (MQ=255) gATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGccc > 2:228446/1‑149 (MQ=255) aTCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCt < 7:207049/149‑1 (MQ=255) aTCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCt > 8:80939/1‑149 (MQ=255) tCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTc > 3:289247/1‑149 (MQ=255) aTAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCa > 5:105938/1‑149 (MQ=255) aaTGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACt > 3:192300/1‑149 (MQ=255) aaTGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACt > 5:224440/1‑149 (MQ=255) aTGGTCGTACTGTCGGCGTTACGGTATTTCACAAGGAAGTTACTTGGCGGTCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTGTCGAACACAGCGGAGGTTCTATCGGCCCCCCACTc < 5:343610/149‑1 (MQ=255) tCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGAtt > 8:72570/1‑149 (MQ=255) tACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAACAGGCAGGAAGAGAAACGGGCGTGTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTcc < 2:64782/149‑1 (MQ=255) tACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTcc < 1:228446/149‑1 (MQ=255) tcgtcgTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTcac > 3:266001/1‑148 (MQ=255) tcgtcgTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTcac > 5:278934/1‑148 (MQ=255) tcgtTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACaaa > 8:117093/1‑148 (MQ=255) gtTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAgc > 2:101015/1‑149 (MQ=255) tttCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGa > 1:202569/1‑148 (MQ=255) tttCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGAt > 1:197610/1‑149 (MQ=255) cacaAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCgg > 2:225912/1‑110 (MQ=255) cacaAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCgg < 1:225912/110‑1 (MQ=255) caAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTTGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCg > 5:7982/1‑149 (MQ=255) ggAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTg < 6:105938/149‑1 (MQ=255) ggAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTAAGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTATATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGATg > 1:124090/1‑149 (MQ=255) gTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTgtcgt > 1:265605/1‑149 (MQ=255) ttGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCAcc > 1:226890/1‑149 (MQ=255) ttcctGCCTTTTTAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTgtcgt > 1:17965/5‑142 (MQ=255) ttcctGCCTTTTTAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTgtcgt < 2:17965/138‑1 (MQ=255) ggCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCg < 6:224440/148‑1 (MQ=255) tcctGCCTTTTTAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGc > 5:218703/4‑149 (MQ=255) gCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGc < 7:72570/149‑1 (MQ=255) tGCCTTTTTAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCt > 5:321260/1‑147 (MQ=255) tGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTga < 2:197610/149‑1 (MQ=255) tGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTga < 2:202569/149‑1 (MQ=255) gCCTTTTTAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATa > 3:212342/1‑126 (MQ=255) gCCTTTTTAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATa < 4:212342/126‑1 (MQ=255) gCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTgag > 6:341513/1‑149 (MQ=255) cTTTTTAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTgagga < 6:321260/149‑1 (MQ=255) cTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTgag > 8:282316/1‑147 (MQ=255) ttttAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTAGATAGTCGCTGTCGTCCACCGGCTgaggag > 5:186521/1‑149 (MQ=255) ttAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTGaggagg < 1:101015/148‑1 (MQ=255) tAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTGAggagga < 7:117093/148‑1 (MQ=255) aaaaaGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTGAGGAGGAc < 4:289247/148‑1 (MQ=255) | GGTGGAACTGGACATGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTGAGGAGGAC > NC_002947/4155993‑4156288 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |