Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 4,477,818 C→A 7.8% A58A (GCG→GCT)  PP_3968 ← sensor histidine kinase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029474,477,8180CA 7.8% 169.9 / 4.4 59A58A (GCG→GCT) PP_3968sensor histidine kinase
Reads supporting (aligned to +/- strand):  ref base C (31/23);  new base A (3/2);  total (34/25)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.79e-01

ACACTCGAGCGCAGCGCTCGGTACTCAGAGACCAATTGATCCATCGAAAAGCCCGCTATCAAACGAGTAATGGCATGGGTCTGAGCCGCCGTATCGCTGCTCATTAGAGGGCCTCTGCCTTGCGCCTTCTCAGACTGCTGATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACGGTGCGCAGAATCTTCTCAGAGTGATTCCTGAGGCCGGCTGAATCCTGAGTGGGTAAGTCCGTCTTGACCGAACGTGCGAAATCCTCCCAAGCCTGGAGAATGCTTCCCA  >  NC_002947/4477675‑4477960
                                                                                                                                               |                                                                                                                                              
acacTCGAGCGCAGCGCTCGGTACTCAGAGACCAATTGATCCATCGAAAAGCCCGCTATCAAACGAGTAATGGCATGGGTCTGAGCCGCCGTATCGCTGCTCATTAGAGGGCCTCTGCCTTGCGCCTTCTCAGACTGCTGATGCGCAGt                                                                                                                                           <  3:293542/149‑1 (MQ=255)
    tCGAGAGCAGCGCTCGGTACTCAGAGACCAATTGATCAATCGAAAAGCCCGCTATCAAACGAGTAATGGCATGGTTCTGAGCCGCCGTATCGATTCTCATTAGAGGGCCTATGACTTGCGCCTTCTCAGACTGCTGAAGCGCAGTCt                                                                                                                                         >  8:313579/1‑147 (MQ=255)
    ccGAGCGCTGCGCTCGGTACTCAGAGACCAATTGATCCATCGAAAAGCCCGCTATCAAACGAGAAATGGCATGGGTCTGAGCCGCCGTATCGCGGCTCATTAGAGGGCCTCTGCCTTGCGCCTTCTCAGACTGCTGATGCGCAGTCTgc                                                                                                                                       >  7:212072/2‑148 (MQ=255)
                   ggTACTCAGAGACCAATTGATCCATCGAAAAGCCCGCTATCAAACGAGTAATGGCATGGGTCTGAGCCGCCGTATCGCTGCTCATTAGAGGGCCTCTGCCTTGCGCCTTCTCAGACTGCTGATGCGCAGTCTGAGCAGTACGCatat                                                                                                                          <  6:532/147‑1 (MQ=255)
                      aCTCAGAGACCAATTGATCCATCGAAAAGCCCGCTATCAAACGAGTAATGGCATGGGTCTGAGCCGCCGTATCGCTGCTCATTAGAGGGCCTCTGCCTTGCGCCTTCTCAGACTGCTGATGCGCAGTCTGAGCAGTACGCATATCAGCg                                                                                                                     >  8:104116/1‑149 (MQ=255)
                          agagACCAATTGATCCGTCGAAAAGCCCGCTATCAAACGAGTAATGGCATGGGTCTGAGCCGCCGTATCGCTGCTCATTAGAGGGCCTCTGCCTTGCGCCTTCTCAGACTGCTGATGCGCAGTCTGAGCAGTACGCATATCAGCGTCaa                                                                                                                 >  8:219288/1‑149 (MQ=255)
                            agaCCAATTGATCCATCGAAAAGCCCGCTATCAAACGAGTAATGGCATGGGTCTGAGCCGCCGTATCGCTGCTCATTAGAGGGCCTCTGCCTTGCGCCTTCTCAGACTGCTGATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACg                                                                                                               >  2:295891/1‑149 (MQ=255)
                            agaCCAATTGATCCATCGAAAAGCCCGCTATCAAACGAGTAATGGCATGGGTCTGAGCCGCCGTATCGCTGCTCATTAGAGGGCCTCTGCCTTGCGCCTTCTCAGACTGCTGATGCGCAGTCTGAGCAGTACGCATATCAGAGGCAACg                                                                                                               >  6:290816/1‑149 (MQ=255)
                              aCCAATTGATCCATCGAAAAGCCCGCTATCAAACGAGTAATGGCATGGGTCTGAGCCGCCGTATCGCTGCTCATTAGAGGGCCTCTGCCTTGCGCCTTCTCAGACTGCTGATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACGGt                                                                                                             <  7:104116/149‑1 (MQ=255)
                                      aTCCATCGAAAAGCCCGCTATCAAACGAGTAATGGCATGGGTCTGAGCCGCCGTATCGCTGCTCATTAGAGGGCCTCTGCCTTGCGCCTTCTCAGACTGCTGATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACGGTGCGCAGaa                                                                                                     >  8:124703/1‑149 (MQ=255)
                                         cATCGAAAAGCCCGCTATCAAACGAGTAATGGCATGGGTCTGAGCCGCCGTATCGCTGCTCATTAGAGGGCCTCTGCCTTGCGCCTTCTCAGACTGCTGATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACGGTGCGCAGAAtct                                                                                                  >  5:132594/1‑149 (MQ=255)
                                          aTCGAAAAGCGCGCTATCAAACGAGTAATGGCATGGGTCTGAGCCGCCGTATCGCTGCTCATTAGAGGGCCTCTGCCTTGCGCCTTCTCAGACTGCTGATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACGGTGCGCAGAAtctt                                                                                                 <  1:16037/149‑1 (MQ=255)
                                          aTCGAAAAGCCCGCTATCAAACGAGTAATGGCATGGGTCTGCGCCGCCGTATCGCTGCTCATTAGAGGGCCTCTGCCTTGCGCCTTCTCAGACTGCTGATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACCGTGCGAAGAAtct                                                                                                  >  8:128847/1‑148 (MQ=255)
                                          aTCGAAAAGCCCGCTATCAAACGAGTAATGGCATGGGTCTGAGCCGCCGTATCGCTGCTCATTAGAGGGCCTCTGCCTTGCGCCTTCTCAGACTGCTGATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACGGTGCTCAGAAtctt                                                                                                 <  6:132594/149‑1 (MQ=255)
                                             gAAAAGCCCGCTATCAAACGAGTAATGGCATGGGTCTGAGCCGCCGAATCTATGCTAAATAGAGGGCCTATGCATTGCTCCTTCTCAGACTGCTGATGCGCCGTCGGAGCAGTCCGCATATCAGCGGACACGGTGCGCAGAAtcttct                                                                                               >  6:252266/1‑148 (MQ=255)
                                                aaGCCCGCTATCAAACGAGTAATGGCATGGGTCTGAGCCGCCGTATCGCTGCTCATTAGAGGGCCTCTGCCTTGCGCCTTCTCAGACTGCTGATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACGGTGCGCAGAATCTTCTCaga                                                                                           <  7:124703/149‑1 (MQ=255)
                                                   cccGCTATCAAACGAGTAATGGCATGGGTCTGAGCCGCCGTATCGCTGCTCATTAGAGGGCCTCTGCCTTGCGCCTTCTCAGACTGCGCATCAGCAGTCTGa                                                                                                                                       >  6:18585/1‑102 (MQ=255)
                                                   cccGCTATCAAACGAGTAATGGCATGGGTCTGAGCCGCCGTATCGCTGCTCATTAGAGGGCCTCTGCCTTGCGCCTTCTCAGACTGCGCATCAGCAGTCTGa                                                                                                                                       <  5:18585/102‑1 (MQ=255)
                                                    ccGCTATCAAACGAGTAATGGCATGGGTCTGAGCCGCCGTATCGCTGCTCATTATAGGGCCTCTGCCTTGCGCCTTCTCAGACTGCTGATGCGCAGTCTGAGCAGTACGCATATAAGAGGAAACGGTTCGCAGAATCTTATCAGATTGa                                                                                       >  8:233199/1‑149 (MQ=255)
                                                     cGCTATCAAACGAGTAATGGCATGGGTCTGAGCCGCCGTATCGCTGCTCATTAGAGGGCCTCTGCCTTGCGCCTTCTCAGACTGCGCATCAGCAGTCTGa                                                                                                                                       <  1:143234/100‑1 (MQ=255)
                                                     cGCTATCAAACGAGTAATGGCATGGGTCTGAGCCGCCGTATCGCTGCTCATTAGAGGGCCTCTGCCTTGCGCCTTCTCAGACTGCGCATCAGCAGTCTGa                                                                                                                                       >  2:143234/1‑100 (MQ=255)
                                                          tCAAACGAGTAATGGCATGGGTCTGAGCCGACGTATCGCTGCTCATTAGAGTGCCTCTGCCTTGCGCCTTCTCAGACTGCTGATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACGGTGCGCAGAATCTTCTCAGAGTGATTCCt                                                                                  <  7:313579/148‑1 (MQ=255)
                                                            aaaCGAGTAATGGCATGGGTCTGAGCCGCCGTATCGCTGCTCATTAGAGGGCCTCTGCCTTGCGCCTTCTCAGACTGCTGATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACGGTGCGCAGAATCTTCTCAGAGTGATTCCTGa                                                                                <  6:46671/148‑1 (MQ=255)
                                                                       ggCATGGGTCTGAGCCGCCGTATCGCTGCTCATTAGAGGGCCTCTGCCTTGCGCCTTCTCAGACTGCTGATGCGCAGTCTGAGCAGTACGc                                                                                                                              >  8:179910/1‑91 (MQ=255)
                                                                       ggCATGGGTCTGAGCCGCCGTATCGCTGCTCATTAGAGGGCCTCTGCCTTGCGCCTTCTCAGACTGCTGATGCGCAGTCTGAGCAGTACGc                                                                                                                              <  7:179910/91‑1 (MQ=255)
                                                                        gCATGGGTCTGAGCCGCCGTATCGCTGCTCATTAGAGGGCCTCTGCCTTGCGCCTTCTCAGACTGCTGATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACGGTGCGCAGAATCTTCTCAGAGTGATTCCTGAGGCCGGCTGAATc                                                                   >  8:20264/1‑149 (MQ=255)
                                                                         cATGGGTCTGAGCCGCCGTATCGCTGCTCATTAGAGGGCCACTGCCTTGCGCATTCTCAGACTGCTGATGAGCAGTCTGAGCAGTACGCATATCAGCTGAAACGGTGCGCATAAACTTCTCAGAGTGATACCTGAGGACGGCTCaaac                                                                   >  8:136133/1‑146 (MQ=255)
                                                                          aTGGGTCTGAGCCGCCGTATCGCTGCTCATTAGAGGGCCTCTGCCTTGCGCCTTCTCAGACTGCTGATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACGGTGCGCAGAATCTTCTCAGAGTGATTCCTGAGGCCGGCTGAATCCt                                                                 >  3:15398/1‑149 (MQ=255)
                                                                               tCTGAGCCGCCGTATCGCTGCTCATTAGAGGGCCTCTGCCTTGCGCCTTCTCAGACTGCTGATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACGGTGCGCAGAATCTTCTCAGAGTGATTCCTGAGGCCGGCTGAATCCTGAGTg                                                            <  8:212072/149‑1 (MQ=255)
                                                                                   aGCCGCCTTATCGCTGATCATTATAGGGCCTATGCCTTGCGCCTTCTCAGACTGCTGATGCGCAGTCTGAGCAGTAAGCATATCAGCGGCAACGTTGCGCAGAATCTTCTCAGAGTGATTCCTGAGGCAGTCTGAATCCTGAGTgg                                                           <  5:252266/146‑1 (MQ=255)
                                                                                              cGCTGCTCATTAGAGGGCCTCTGCCTTGCGCCTTCTCAGACTGCTGATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACGGTGCGCAGAATCTTCTCAGAGTGATTCCTGAGGCCGGCTGAATCCTGAGTg                                                            >  4:258801/1‑134 (MQ=255)
                                                                                              cGCTGCTCATTAGAGGGCCTCTGCCTTGCGCCTTCTCAGACTGCTGATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACGGTGCGCAGAATCTTCTCAGAGTGATTCCTGAGGCCGGCTGAATCCTGAGTg                                                            <  3:258801/134‑1 (MQ=255)
                                                                                                  gctCATTAGAGGGCCTCTGCCTTGCGCCTTCTCAGACTGCTGATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACGGTGCGCAGAATCTTCTCAGAGTGATTCCTGAGGCCGGCTGAATCCTGAGTGGGTAAGTCCGTCTTGAcc                                          >  6:205159/1‑148 (MQ=255)
                                                                                                    tCATTAGAGGGCCTCTGCCTTGCGCCTTCTCAGACTGCTGATGCCCAGTCTGAGCAGTACGCATATCAGCCGCAACGGTGCGCAGAATCTTCACAGAGTCATTCCAGAGGCCCCCTGAATCCTGACTGGGTAAGTCCGTCTAGACCGaa                                       >  3:227087/1‑149 (MQ=255)
                                                                                                      aTTAGAGGGCCTCTGCCTTGCGCCTTCTCAGACTGCTGATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACGGTGCGCAGAATCTTCTCAGAGTGATTCCTGAGGCCGGCTGAATc                                                                   >  7:266274/1‑119 (MQ=255)
                                                                                                      aTTAGAGGGCCTCTGCCTTGCGCCTTCTCAGACTGCTGATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACGGTGCGCAGAATCTTCTCAGAGTGATTCCTGAGGCCGGCTGAATc                                                                   <  8:266274/119‑1 (MQ=255)
                                                                                                          gagGGCCTCTGCCTTGCGCCTTCTCAGACTGCTGATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACGGTGCGCAGAATCTTCTCAGAGTGATTCCTGAGGCCGGCTGAATCCTGAGTGGGTAAGTCCGTCTTGACCGAACGTGc                                  <  7:219288/148‑1 (MQ=255)
                                                                                                           agGGCCTCTGCCTTGCGCCTTCTCAGACTGCTGATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACGGTGCGCAGAATCTTCTCAGAGTGATTCCTGAGGCCGGCTGAATCCTGAGTGGGTAAGTCCGTCTTGACCGAACGTGCGa                                <  1:104796/149‑1 (MQ=255)
                                                                                                                ctctGCCTTGCGCCTTCTCAGACTGCTGATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACGGTGCGCAGAATCTTCTCAGAGTGATTCCTGAGGCCGGCTGAATCCTGAGTGGGTAAGTCCGTCTTGACCGAACGTGCGAAAtcc                           <  1:295891/149‑1 (MQ=255)
                                                                                                                ctctGCCTTGCGCCTTCTCAGACTGCCGATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACGGTGCGCAGAATCTTCTCAGAGTGATTCCTGAGGCCGGCTGAATCCTGAGTggg                                                          <  4:266845/118‑1 (MQ=255)
                                                                                                                ctctGCCTTGCGCCTTCTCAGACTGCCGATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACGGTGCGCAGAATCTTCTCAGAGTGATTCCTGAGGCCGGCTGAATCCTGAGTggg                                                          >  3:266845/1‑118 (MQ=255)
                                                                                                                 tctGCCTTGCGCCTTCTCAGACTGCTGATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACGGTGCGCAGAATCTTCTCAGAGTGATTCCTGAGGCCGGCTGAATCCTGAGTGGGTAAGTCCGTCTTGACCGAACGTGCGAAAtcct                          >  1:191600/1‑149 (MQ=255)
                                                                                                                    gCCTTGCGCCTTCTCAGACTGCTGATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACGGTGCGCAGAATCTTCTCAGAGTGATTCCTGAGGCCGGCTGAATCCTGAGTGGGTAAGTCCGTCTTGACCGAACGTGCGAAAtcctcc                        >  4:279264/1‑148 (MQ=255)
                                                                                                                     ccTTGCGCCTTCTCAGACTGCTGATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACGGTGCGCAGAATCTTCTCAGAGTGATTCCTGAGGCCGGCTGAATCCTGAGTGGGTAAGTCCGTCTTGACCGAACGTGCGAAATCCTccc                       >  6:295917/1‑148 (MQ=255)
                                                                                                                       ttGCGCCTTCTCAGACTGCTGATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACGGTGCGCAGAATCTTCTCAGAGTGATTCCTGAGGCCGGCTGAATCCTGAGTGGGTAAGTCCGTCTTGACCGAACGTGCGAAATCCTCCCAAg                    >  6:168037/1‑149 (MQ=255)
                                                                                                                          cgcCTTCTCAGACTGCTGATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACGGTGCGCAGAATCTTCTCAGAGTGATTCCTGAGGCCGGCTGAATCCTGAGTGGGTAAGTCCGTCTTGACCGAACGTGCGAAATCCTCCCAAGCCt                 <  5:168037/149‑1 (MQ=255)
                                                                                                                           gcCTTCTCAGACTGCTTATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACGGTGCGCAGAATCTTCTCAGAGTGATTCCTGAGGCCGGCTGAATCCTGAGTGGGTAAGTCCGTCTTGACCGAACGTGCGAAATCCTCCCAAGCCTg                <  7:128847/149‑1 (MQ=255)
                                                                                                                           gcCTTCTCAGACTGCTGATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACGGTGCGCAGAATCTTCTCAGAGTGATTCCTGAGGCCGGCTGAATCCTGAGTGGGTAAGTCCGTCTTGACAGAAAGTGCGAAATCCTCCCACGCATg                >  4:240298/1‑149 (MQ=255)
                                                                                                                             cTTCTCAGACTGCTGATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACGGTGCGCAGAATCTTCTCAGAGTGATTCCTGAGGCCGGCTGAATCCTGAGTGGGTAAGTCCGTCTTGACCGAACGTGCGAAATCCTCCCAAGCCTg                <  3:135819/147‑1 (MQ=255)
                                                                                                                             cTTCTCAGACTGCTGATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACGGTGCGCAGAATCTTCTCAGAGTGATTCCTGAGGCCGGCTGAATCCTGAGTGGGTAAGTCCGTCTTGACCGAACGTGCGAAATCCTCCCAAGCCTg                >  4:135819/1‑147 (MQ=255)
                                                                                                                                  cAGACTGCTGATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACGGTGCGCAGAATCTTCTCAGAGTGATTCCTGAGGCCGGCTGAATCCTGAGTGGGTAAGt                                                     >  4:282740/1‑105 (MQ=255)
                                                                                                                                  cAGACTGCTGATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACGGTGCGCAGAATCTTCTCAGAGTGATTCCTGAGGCCGGCTGAATCCTGAGTGGGTAAGt                                                     <  3:282740/105‑1 (MQ=255)
                                                                                                                                   aGACTGCTGATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACGGTGCGCAGAATCTTCTCAGAGTGATTCCTGAGGCCGGCTGAATCCTGAGTGGGTAAGTCCGTCTTGACCGAACGTGCGAAATCCTCCCAAGCCTGGAGaa           <  5:205159/146‑1 (MQ=255)
                                                                                                                                   aGACTGCTGATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACGGTGCGCAGAATCTTCTCAGAGTGATTCCTGAGGCCGGCTGAATCCTGAGTGGGTAAGTCCGTCTTGACCGAACGTGCGAAATCCTCCCAAGCCTGGAGAATGc        >  4:53933/1‑149 (MQ=255)
                                                                                                                                     aCTGCTGATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACGGTGCGCAGAATCTTCTCAGAGTGATTCCt                                                                                  >  1:205922/1‑73 (MQ=255)
                                                                                                                                     aCTGCTGATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACGGTGCGCAGAATCTTCTCAGAGTGATTCCt                                                                                  <  2:205922/73‑1 (MQ=255)
                                                                                                                                       tgctgATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACGGTGCGCAGAATCTTCTCAGAGTGATTCCTGAGGCCGGCTGAATCCTGAGTGGGTAAGTCCGTCTTGACCGAACGTGCGAAATCCTCCCAAGCCTGGAGAATGCTTcc    >  6:71903/1‑149 (MQ=255)
                                                                                                                                         ctgATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACGGTGCGCAGAATCTTCTCAGAGTGATTCCTGAGGCCGGCTGAATCCTGAGTGGGTAAGTCCGTCTTGACCGAACGTGCGAAATCCTCCCAAGCCTGGAGAATGCTTCCCa  >  1:44161/1‑149 (MQ=255)
                                                                                                                                          tgATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACGGTGCGCAGAATCTTCTCAGAGTGATTCCTGAGGCCGGCTGAATCCTGAGTGGGTAAGTCCGTCTTGACCGAACGTGCGAAATCCTCCCAACCCTGGAGAATGCTTCCCa  >  2:169400/1‑148 (MQ=255)
                                                                                                                                              gcgcAGTCTGAGCAGTACGCATATCAGCGGCAACGGTGCGCAGAATCTTCTCAGAGTGATTCCTGAGGCCGGCTGAATCCTGAGTGGGTAAGTCCGTCTTGACCGAACGTGCGAAATCCTCCCAAGCCTGGAGAAt          <  5:229752/136‑1 (MQ=255)
                                                                                                                                              gcgcAGTCTGAGCAGTACGCATATCAGCGGCAACGGTGCGCAGAATCTTCTCAGAGTGATTCCTGAGGCCGGCTGAATCCTGAGTGGGTAAGTCCGTCTTGACCGAACGTGCGAAATCCTCCCAAGCCTGGAGAAt          >  6:229752/1‑136 (MQ=255)
                                                                                                                                               |                                                                                                                                              
ACACTCGAGCGCAGCGCTCGGTACTCAGAGACCAATTGATCCATCGAAAAGCCCGCTATCAAACGAGTAATGGCATGGGTCTGAGCCGCCGTATCGCTGCTCATTAGAGGGCCTCTGCCTTGCGCCTTCTCAGACTGCTGATGCGCAGTCTGAGCAGTACGCATATCAGCGGCAACGGTGCGCAGAATCTTCTCAGAGTGATTCCTGAGGCCGGCTGAATCCTGAGTGGGTAAGTCCGTCTTGACCGAACGTGCGAAATCCTCCCAAGCCTGGAGAATGCTTCCCA  >  NC_002947/4477675‑4477960

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑