| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,483,550 | A→T | 5.6% | intergenic (‑88/‑120) | PP_3975 ← / → PP_3976 | hypothetical protein/isochorismatase family hydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,483,550 | 0 | A | T | 5.6% | 279.6 / 4.5 | 89 | intergenic (‑88/‑120) | PP_3975/PP_3976 | hypothetical protein/isochorismatase family hydrolase |
| Reads supporting (aligned to +/- strand): ref base A (45/39); new base T (3/2); total (48/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.17e-01 | |||||||||||
CCTCTTCCCATGAAACGCCCCAGTAAGCAGTGTCGTCGTTGAAAGGTCGTGAAGCGGCCATTGGATTCTCCTTGGCGAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCGACGACCCGCCGAAAAACTCTCGCCACCGTTCAGCAAAAGGGAAGAACAATGAGCAATCCACACACTGAAGTCCTGA > NC_002947/4483402‑4483697 | ccTCTTCCCATGAAACGCCCCAGTAAGCAGTGTCGTCGTTGAAAGGTCGTGAAGCGGCCATTGGATTCTCCTTGGCGAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGTTTGGACGCTACCAATGGCGCATTaaa < 7:220019/149‑1 (MQ=255) ctctTCCCATGAAACGCCCCAGTAAGCAGTGTCGTCGTTGAAAGGTCGTGAAGCGGCCATTGGTTTCTCCTTGGCGAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAg > 8:279474/1‑149 (MQ=255) ctctTCCCATGAAACGCCCCAGTAAGCAGTGTCGTCGTTGAAAGGTCGTGAAGCGGCCATTGGATTCTCCTTGGCGAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAg > 8:59648/1‑149 (MQ=255) ctctTCCCATGAAACGCCCCAGTAAGCAGTGTCGTCGTTGAAAGGTCGTGAAGCGGCCATTGGATTCTCCTTGGCGAAAAATGGATCGACGTGATCCGACTGGCCGAAATCATAGCACCGGATTGGACGCTACCAATGGCGCATTAAAg > 8:55153/1‑149 (MQ=255) ccATGAAACGCCCCAGTAAGCAGTGTCGTCGTTGAAAGGTCGTGAAGCGGCCATTGGATTCTCCTTGGCGAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTc > 4:198833/1‑149 (MQ=255) cATGAAACGCCCCAGTAAGCAGTGTCGTCGTTGAAAGGTCGTGAAGCGGCCATTGGATTCTCCTTGGCGAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTc > 5:12672/1‑148 (MQ=255) aTGAAACGCCCCAGTAAGCAGTGTCGTCGTTGAAAGGTCGTGAAGCGGCCATTGGATTCTCCTTGGCGAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCTTTAATGCGccattg > 5:190268/1‑145 (MQ=255) aTGAAACGCCCCAGTAAGCAGTGTCGTCGTTGAAAGGTCGTGAAGCGGCCATTGGATTCTCCTTGGCGAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTcc > 7:154088/1‑148 (MQ=255) gAAACGCCCCAGTAAGCAGTGTCGTCGTTGAAAGGTCGTGAAGCGGCCATTGGATTCTCCTTGGCGAAAAATGGATCGACTTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCaa < 6:224969/148‑1 (MQ=255) gAAACGCCCCAGTAAGCAGTGTCGTCGTTGAAAGGTCGTGAAGCGGCCATTGGATTCTCCTTGGCGAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGAGCATTAAAGCGCCTcc > 5:112011/1‑146 (MQ=255) aaaCGCCCCAGTAAGCAGTGTCGTCGTTGAAAGGTCGTGAAGCGGCCATTGGATTCTCCTTGGCGAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCTTTAATGCGccattggt < 6:190268/148‑7 (MQ=255) aCGCCCCAGTAAGCAGTGTCGTCGTTGAAAGGTCGTGAAGCGGCCATTGGATTCTCCTTGGCGAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAgc > 4:65804/1‑149 (MQ=255) aCGCCCCAGTAAGCAGTGTCGTCGTTGAAAGGTCGTGAAGCGGCCATTGGATTCTCCTTGGCGAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAgc > 3:115208/1‑149 (MQ=255) ccccAGTAAGCAGTGTCGTCGTTGAAAGGTCGTGAAGCGGCCATTGGATTCTCCTTGGCGAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAgc > 4:245641/1‑134 (MQ=255) ccccAGTAAGCAGTGTCGTCGTTGAAAGGTCGTGAAGCGGCCATTGGATTCTCCTTGGCGAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAgc < 3:245641/134‑1 (MQ=255) cccAGTAAGCAGTGTCGTCGTTGAAAGGTCGTGAAGCGGCCATTCGATTCTCCTTGGCGAAAAATGGATCCACGTGAACCGACTCGCCGAAATCCTAGCACCGGATTGGACGCAACCAATGGCGCATTAAAGCGCCACCAAGAGCGCa > 3:62783/1‑148 (MQ=255) ccAGTAAGCAGTGTCGTCGTTGAAAGGTCGTGAAGCGGCCATTGGATTCTCCTTGGCGAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCaa > 6:330650/1‑148 (MQ=255) tAAGCAGTGTCGTCGTTGAAAGGTCGTGAAGCGGCCATTGGATTCTCCTTGGCGAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTg > 1:226228/1‑149 (MQ=255) aGCAGTGTCGTCGTTGAAAGGTCGTGAAGCGGCCATTGGATTCTCCTTGGCGAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTgcg < 7:262971/149‑1 (MQ=255) aGCAGTGTCGTCGTTGAAAGGTCGTGAAGCGGCCATTGGATTCTCCTTGGCGAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTgc < 7:113492/148‑1 (MQ=255) aGCAGTGTCGTCGTTGAAAGGTCGTGAAGCGGCCATTGGATTCTCCTTGGCGAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTgc < 7:279474/148‑1 (MQ=255) tcgtTGAAAGGTCGTGAAGCGGCCATTGGATTCTCCTTGGCGAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTc > 1:301326/1‑149 (MQ=255) ttGAAAGGTCGTGAAGCGGCCATTGGATTCTCCTTGGCGAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCt > 3:324382/1‑149 (MQ=255) aaaGGTCGTGAAGCGGCCATTGGATTCTCCTTGGCGAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGa < 1:337641/148‑1 (MQ=255) aaGGTCGTGAAGCGGCCATTGGATTCTCCTTGGCGAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAgt < 3:276712/149‑1 (MQ=255) gTCGTGATGCGGCCATTGGATTCTCCTTGGCGAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAgc < 6:56814/118‑1 (MQ=255) tCGTGAAGCGGCCATTGGATTCTCCTTGGCGAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGttt < 3:289311/149‑1 (MQ=255) gTGAAGGGGCCATTGGATTCTCCTTGGCGAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCTCCGGTTTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCGACCGATTCGCTGAGTGTTTc < 4:62783/148‑1 (MQ=255) gTGAAGCGGCCATTGGATTCTCCTTGGCGAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTc < 3:198833/148‑1 (MQ=255) gTGAAGCGGCCATTGGATTCTCCTTGGCGAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCg > 2:107665/1‑149 (MQ=255) tGAAGCGGCCATTGGATTCTCCTTGGCGAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGc < 5:330650/149‑1 (MQ=255) gCGGCCATTGGATTCTCCTTGGCGAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTgc < 2:3107/120‑1 (MQ=255) gCGGCCATTGGATTCTCCTTGGCGAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTgc > 1:3107/1‑120 (MQ=255) gCGGCCATTGGATTCTCCTTGGCGAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATc < 8:114288/149‑1 (MQ=255) ggATTCTCCTTCGCGAAAAATGGACCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTg < 6:16942/148‑1 (MQ=255) gATTCTCCTTGGCGAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTgg < 1:67133/148‑1 (MQ=255) gATTCTCCTTGGCGAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGc < 7:59648/149‑1 (MQ=255) aTTCTCCTTGGCGAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGc < 7:55153/148‑1 (MQ=255) ttGGCGAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGc > 7:258561/1‑148 (MQ=255) ttGGCGAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGc > 4:118408/1‑148 (MQ=255) gAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGa > 4:36339/1‑113 (MQ=255) gAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGa < 3:36339/113‑1 (MQ=255) gAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCgacgac < 6:112011/149‑1 (MQ=255) gAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCgacgac > 4:271236/1‑149 (MQ=255) gAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCgacgac > 2:114316/1‑149 (MQ=255) gAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGCCTGACCCTCGGcgccatc < 1:107665/149‑6 (MQ=255) aaaTGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCGACGACccg > 5:338600/1‑149 (MQ=255) aaTGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCGACGACccgc < 3:271236/149‑1 (MQ=255) gATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCt < 2:289902/94‑1 (MQ=255) gATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCt > 1:289902/1‑94 (MQ=255) aTCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCGACGACccgc > 5:283169/1‑135 (MQ=255) aTCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCGACGACccgc < 6:283169/135‑1 (MQ=255) aTCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCGACGACCCGCCGAAAAACTCTCGc > 5:160057/1‑149 (MQ=255) cTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCGACGACCCGCCGAAAAACTCTCGCCACCGt > 2:156458/1‑149 (MQ=255) ggCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCGACGACCCGCCGAAAAACTCTCGCCACCGtt > 3:199655/1‑148 (MQ=255) gCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCGACGACCCGCCGAAAAACTCTCGCCACCGtt > 1:136800/1‑147 (MQ=255) gCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCGACGACCCGCCGAAAAACTCTCGCCACCGTTCa < 3:65804/149‑1 (MQ=255) cGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCGACGACCCGCCGAAAAACTCTCGCCACCGTTCAGc < 8:258561/149‑1 (MQ=255) gAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCGACGACCCGCCGAAAAACTCTCGCCACCGTTCAGc > 8:148818/1‑148 (MQ=255) tCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCGACGACCCGCCGAAAAACTCTCGCCACCGTTCAGCAAAAg > 3:71029/1‑149 (MQ=255) ccTAGCACCGGATTGGACGCAACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCGACGACCCGCCGAAAAACTCTCGCCACCGTTCAGCAAAAgg > 6:187886/1‑149 (MQ=255) cTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTgg > 2:1932/1‑94 (MQ=255) cTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTgg < 1:1932/94‑1 (MQ=255) tAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCGACGACCCGCCGAAAAACTCTCGCCACCGTTCAGCAAAAggg > 1:13149/1‑148 (MQ=255) aGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCGACGACCCGCCGAAAAACTCTCGCCACCGTTCAGCAAAAggg > 7:17676/1‑147 (MQ=255) gATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCGACGACCCGCCGAAAAACTCTCGCCACCGTTCAGCAAAAGGGAAGAACAAt > 4:56775/1‑149 (MQ=255) ttGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCGACGACCCGCCGAAAAACTCTCGCCACCGTTCAGCAAAAGGGAAGAACAATGa < 8:17676/149‑1 (MQ=255) gACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCGACGACCCGCCGAAAAACTCTCGCCACCGTTCAGCAAAAGGGAAGAACAATGAGc > 7:279773/1‑148 (MQ=255) aCGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCGACGACCCGCCGAAAAACTCTCGCCACCGTTCAGCAAAAGGGAAGAACAATGa > 8:219134/1‑145 (MQ=255) aCGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCGACGACCCGCCGAAAAACTCTCGCCACCGTTCAGCAAAAGGGAAGAACAATGa < 7:219134/145‑1 (MQ=255) gCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCgacgac < 2:224666/96‑1 (MQ=255) gCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCgacgac > 1:224666/1‑96 (MQ=255) gCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGACACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCGACGACCCGCCGAAAAACTCTCGCCACCGTTCAGCAAAAGGGAAGAACAATGAGCAATc < 1:134161/149‑1 (MQ=255) tACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGACACTCGGCGACGACACGCCGAAAAACTCTCGCCACCGTTCAGCAAAAGGGAAGAACAATGAGCAATcc > 4:46821/1‑148 (MQ=255) tACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGATGACACTCGGCGACGACCCGCCGAAAAACTCTCGCCACCGTTCAGCAAAAGGGAAGAACAATGAGCAATCca > 4:51116/1‑149 (MQ=255) aCCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCGACGACCCGCCGAAAAACTCTCGCCACCGTTCAGCAAAAGGGAAGAACAATGAGCAATCca > 5:119498/1‑148 (MQ=255) ccAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCGACGACCCGCCGAAAAACTCTCGCCACCGTTCAGCAAAAGGGAAGAACAATGAGCAATCcaca < 2:13149/149‑1 (MQ=255) ccAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCGACGACCCGCCGAAAAACTCTCGCCACCGTTCAGCAAAAGGGAAGAACAATGAGCAATCcac < 3:118408/148‑1 (MQ=255) cAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCGACGACCCGCCGAAAAACTCTCGCCACCGTTCa > 1:157696/1‑118 (MQ=255) cAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCGACGACCCGCCGAAAAACTCTCGCCACCGTTCa < 2:157696/118‑1 (MQ=255) ggaggCGCTTTAATGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCGACGACCCGCCGAAAAACTCTCGCCACCGTTCAGCAAAAGGGAAGAACAATGAGCAATCcacaca > 1:294205/4‑149 (MQ=255) ggaggCGCTTTAATGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCGACGACCCGCCGAAAAACTCTCGCCACCGTTCAGCAAAAGGGAAGAACAATGAGCAATCcacaca > 4:173251/4‑149 (MQ=255) aaTGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCGACGACCCGCCGAAAAACTCTCGCCACCGTTCAGCAAAAGGGAAGAACAATGAGCAATCcacaca > 7:152745/1‑149 (MQ=255) cgcATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCGACGACCCGCCGAAAAACTCTCGCCACCGTTCAGCAAAAGGGAAGAACAATGAGCAATCCACACACTGaa < 3:56775/149‑1 (MQ=255) gctttAATGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCGACGACCCGCCGAAAAACTCTCGCCACCGTTCAGCAAAAGGGAAGAACAATGAGCAATCCACACACTGAAg < 3:173251/146‑1 (MQ=255) gcATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCGACGACCCGCCGAAAAACTCTCGCCACCGTTCAGCAAAAGGGAAGAACAATGAGCAATCCACACACTGAAg < 4:115208/149‑1 (MQ=255) aTTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCGACGACCCGCCGAAAAACTCTCGCCACCGTTCAGCAAAAGGGAAGAACAATGAGCAATCCACACACTGAAGTc > 4:122533/1‑149 (MQ=255) aTTAAAGCGCCTCCAAGAGCGAAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCGAAGACCCGCCGAAAAACTCTCGCCACCGTTCAGCAAAAGGGAAGAACAATGAGCAATCCACACACTGAAGTc < 5:187886/149‑1 (MQ=255) ttAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCGACGACCCGCCGAAAAACTCTCGCCACCGTTCAGCAAAAGGGAAGAACAATGAGCAATCCACACACTGAAGTcc < 4:71029/149‑1 (MQ=255) ttAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCGACGACCCGCCGAAAAACTCTCGCCACCGTTCAGCAAAAGGGAAGAACAATGAGCAATCCACACACTGAAGTcc < 2:301326/149‑1 (MQ=255) aaaGCTCCTCCAAGATCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCGACGACCCGCCGAAAAACTCTCGCCACCGTTCAGAAAAAGGGAAGAACAATGAGCAATCCACACACTGAAGTCCt < 8:154088/148‑1 (MQ=255) aaaGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCGACGACCCGCCGAAAAACTCTCGCCACCGTTCAGCAAAAGGGAAGAACAATGAGCAATCCACACACTGAAGTCCt < 4:324382/148‑1 (MQ=255) aaGCGCCTCCAAGAGCGCAAAATTGCGCCCCCGATTCGCTGACTGTTTCGCTATCTTGGGCTGGCACTCGGCGACGACCCGCCGAAAAACTCTCGCCACCGTTCAGCAAAAGGGAAGAACAATGAGCAATCCACACACTGAAGTCCTGa > 8:192207/1‑149 (MQ=255) aGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCGACGACCCGCCGAAAAACTCTCGCCACCGTTCAGCAAAAggg > 8:13721/1‑113 (MQ=255) aGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCGACGACCCGCCGAAAAACTCTCGCCACCGTTCAGCAAAAggg < 7:13721/113‑1 (MQ=255) | CCTCTTCCCATGAAACGCCCCAGTAAGCAGTGTCGTCGTTGAAAGGTCGTGAAGCGGCCATTGGATTCTCCTTGGCGAAAAATGGATCGACGTGATCCGACTGGCCGAAATCCTAGCACCGGATTGGACGCTACCAATGGCGCATTAAAGCGCCTCCAAGAGCGCAAAATTGCGCCACCGATTCGCTGAGTGTTTCGCTATCTTGGGCTGGCACTCGGCGACGACCCGCCGAAAAACTCTCGCCACCGTTCAGCAAAAGGGAAGAACAATGAGCAATCCACACACTGAAGTCCTGA > NC_002947/4483402‑4483697 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |