| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,808,839 | T→C | 5.4% | L132L (TTG→CTG) | dsbD‑II → | thiol/disulfide interchange protein 2 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,808,839 | 0 | T | C | 5.4% | 222.2 / 2.5 | 74 | L132L (TTG→CTG) | dsbD‑II | thiol/disulfide interchange protein 2 |
| Reads supporting (aligned to +/- strand): ref base T (37/33); new base C (2/2); total (39/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.06e-01 | |||||||||||
ACGACGAGTTCTTCGGCGACAGCGCGGTATACCGCGACCAGCTTGAACTGCTATTGCCTGCCAACGCCCAGGGTCAGTTGCGCCTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAGGCCACCTGGCCTGGAGCCTGTTGGCGTTCTTCGGCCTTGGCCTGCTGCTGGCCTTCACCCCCTGCTCGTTGCCGATGC > NC_002947/4808693‑4808986 | acgacgAGTTCTTCGGCGACAGCGCGGTATACCGCGACCAGCTTGAACTGCTATTGCCTGCCAACGCCCAGGGTCAGTTGCGCCTGGGCTGGCAGGGCTGCGCCTACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTg < 5:139020/149‑1 (MQ=255) gacgtGTTCTTCGGCAACAGCGCGTTATACCGCGACCAGCTTGAACTGCTATTGCCTGCCAACGCCCAGGGTCAGTTGCGCCTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCTATCGACTTggg < 5:206404/149‑1 (MQ=255) gacgaGTTCTTCGGCGACAGCGCGGTATACCGCGACCAGCTTGAACTGCTATTGCCTGCCAACGCCCAGGGTCAGTTGCGCCTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTggg > 2:138578/1‑149 (MQ=255) gacgaGTTCTTCGGCGACAGCGCGGTATACCGCGACCAGCTTGAACTGCTATTGCCTGCCAACGCCCAGGGTCAGTTGCGCCTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACATCGATCGACTTggg > 8:86972/1‑149 (MQ=255) gacgaGTTCTTCGGCGACAGCGCGGTAGACCGCGACCAGCTTGAACTGCTATTGCCTGCCAACGCCCAGGGTCAGTTGCGCCTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTggg > 4:14971/1‑149 (MQ=255) acgaGTTCTTCGGCGACAGCGCGGTATACCGCGACCAGCTTGAACTGCTATTGCCTGCCAACGCCCAGGGTCAGTTGCGCCTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGggc > 8:261735/1‑149 (MQ=255) tcGGCGACAGCGCGGTATACCGCGACCAGCTTGAACTGCTATTGCCTGCCAACGCCCAGGGTCAGTTGCGCCTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGt < 8:114104/148‑1 (MQ=255) cGGCGACAGGGCGGTATACCGCGACCATCTTGAACTTCTATTGCCTGCCAACGCCCAGGGTCAGTTGCGCCTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTGCTGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCg < 1:237114/147‑1 (MQ=255) gcgcGGTATACCGCGACCAGCTTGAACTGCTATTGCCTGCCAACGCCCAGGGTCAGTTGCGCCTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACgccggcc > 6:127508/1‑149 (MQ=255) cgcgGTATACCGCGACCAGCTTGAACTGCTATTGCCTGTCAACGCCCAGGGTCAGTTGCGCCTGGGCTGGCAGGGCTGCGCCGACGCTGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACgccggccg > 3:3116/1‑149 (MQ=255) cgGTATACCGCGACCAGCTTGAACTGCTATTGCCTGCCAACGCCCAGGGTCAGTTGCGCCTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGgccgcc < 7:134091/149‑1 (MQ=255) gTATACCGCGACCAGCTTGAACTGCTATTGCCTGCCAACGCCCAGGGTCAGTTGCGCCTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGa < 8:159957/149‑1 (MQ=255) ataCCGCGACCAGCTTGAACTGCTATTGCCTGCCAACGCCCAGGGTCAGTTGCGCCTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAg > 6:253456/1‑148 (MQ=255) ccGCGACGAGCTTGAACTGCTATTGCCTGCCAACGCCCAGGGTCAGTGGCGCCTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCaa < 4:34957/148‑1 (MQ=255) ccGCGACCAGCTTGAACTGCTATTGCCTGCCAACGCCCAGGGTCAGTTGCGCCTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCaa < 1:196016/148‑1 (MQ=255) cgcgACCAGCTTGAACTGCTATTGCCTGCCAACGCCCAGGGTCAGTTGCGCCTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGc < 5:127508/149‑1 (MQ=255) cgcgACCAGCTTGAACTGCTATTGCCTGCCAACGCCCAGGGTCAGTTGCGCCTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCAGAGCAAGc > 5:167450/1‑149 (MQ=255) aCCAGCTTGAACTGCTATTGCCTGCCAACGCCCAGGGTCAGTTGCGCCTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGc < 6:271733/149‑1 (MQ=255) gCTTGAACTGCTATTGCCTGCCAACGCCCAGGGTCAGTTGCGCCTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGAc > 8:291588/1‑148 (MQ=255) cTTGAACTGCTATTGCCTGCCAACGCCCAGGGTCAGTTGCGCCTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGCCCa > 8:156031/1‑149 (MQ=255) ttGAACTGCTATTGCCTGCCAACGCCCAGGGTCAGTTGCGCCTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAg > 3:137177/1‑149 (MQ=255) aCTGCTATTGCCTGCCAACGCCCAAGGTCAGTTGCGCCTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGgcgc > 7:206251/1‑149 (MQ=255) tATTGCCTGCCAACGCCCAGGGTCAGTTGCGCCTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGc > 1:317752/1‑148 (MQ=255) ttGCCTGCCAACGCCCAGGGTCAGTTGCGCCTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTgg < 8:123570/145‑1 (MQ=255) ttGCCTGCCAACGCCCAGGGTCAGTTGCGCCTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTgg > 7:123570/1‑145 (MQ=255) gcctgccAACGCCCAGGGTCAGTTGCGCCTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCg > 7:29048/1‑149 (MQ=255) cctgccAACGCCCAGGGTCAGTTGCGCCTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCgg > 5:325413/1‑149 (MQ=255) ctgccAACGCCCAGGGTCAGTTGCGCCTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGCCTGGTCGCTGGcttgctcg < 3:14971/149‑8 (MQ=255) ccAACGCCCAGGGTCAGTTGCGCCTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCtt < 7:291588/149‑1 (MQ=255) gCCCAGGGTCAGTTGCGCCTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGc > 1:100895/1‑148 (MQ=255) cagaGGGTCAGTTGGGCCTGGGCTGGAAGGGCTGCTGCGACGCGGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGAGTTTGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTTGCCAGCGGCCTTCAGCaa < 8:232894/146‑1 (MQ=255) ccAGGGTCAGTTGCGCCTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCCCCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAg > 8:240139/1‑149 (MQ=255) ccAGGGTCAGTTGCGCCTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAgg > 7:290860/1‑125 (MQ=255) ccAGGGTCAGTTGCGCCTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAgg < 8:290860/125‑1 (MQ=255) ccAGGGTCAGTTGCGCCTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAg < 1:138578/149‑1 (MQ=255) ccAGGGTCAGTTGCGCCTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAg < 1:45818/149‑1 (MQ=255) ccAGGGTCAGTTGCGCCTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAg > 7:136976/1‑149 (MQ=255) ccAGGGTCAGTTGCGCCTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACCTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAg > 1:1594/1‑149 (MQ=255) ccAGGGTCAGTTGCGCCTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACCTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAg > 1:7070/1‑149 (MQ=255) aGTTGCGCCTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAGGCCAcctg > 4:240114/1‑149 (MQ=255) gcgcCTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAGGCCAcctggcc < 2:317752/148‑1 (MQ=255) gcCTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAGGCCAcctggcctg > 6:64693/1‑148 (MQ=255) ccTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAGGCCACCTGGCCTGGa < 8:29048/149‑1 (MQ=255) ccTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACATCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAGGCCACCTGGCCTGGa < 7:86972/149‑1 (MQ=255) gCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAGGCCACCTGGCCTGGAGCCTg > 8:164191/1‑149 (MQ=255) gCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAGGCCACCTGGCCTGGAGCCTg > 5:3950/1‑149 (MQ=255) gCAGGGCTGCGCCGACGCCGTCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAGGCCACCTGGCCTGGAGCCTGTTgg < 8:228509/149‑1 (MQ=255) gCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAGGCCACCTGGCCTGGAGCCTGTTg < 3:240114/148‑1 (MQ=255) gCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAGGCCACCTGGCCTGGAGCCTGTTg < 8:206251/148‑1 (MQ=255) cTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACt < 6:98608/50‑1 (MQ=255) cTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACt > 5:98608/1‑50 (MQ=255) tGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAGGcc > 7:244704/1‑121 (MQ=255) tGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAGGcc < 8:244704/121‑1 (MQ=255) gcgcCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAGGCCACCTGGCCTGGAGCCTGTTGGCGttcttc > 5:265621/1‑149 (MQ=255) cgcCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACCTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAGGCCACCTGGCCTGGAGCCTGTTGGCGttcttc < 2:1594/148‑1 (MQ=255) cgcCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACCTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAGGCCACCTGGCCTGGAGCCTGTTGGCGttcttc < 2:7070/148‑1 (MQ=255) aCGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAGGCCACCTGGCCTGGAGCCTGTTGGCGTTCTTCGGCCtt > 5:109617/1‑149 (MQ=255) cGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAGGCCACCTGGCCTGGAGCCTGTTGGCGTTCTTCGGCCTTg < 7:156031/149‑1 (MQ=255) gCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAGGCCACCTGGCCTGGAGCCTGTTGGCGTTCTTCGGCCTTgg > 1:78760/1‑149 (MQ=255) gCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAGGCCACCTGGCCTGGAGCCTGTTGGCGTTCTTCGGCCTTgg < 5:64693/149‑1 (MQ=255) cGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAGGCCACCTGGCCTGGAGCCTGTTGGCGTTCTTCGGCCTTGGcc > 1:119449/1‑149 (MQ=255) ccTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAGGCCACCTGGCCTGGAGCCTGTTGGCGTTCTTCGGCCTTGGCctgc < 4:3116/149‑1 (MQ=255) cTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAGGCCACCTGGCCTGGAGCCTGTTGGCGTTCTTCGGCCTTGGCctgctgctg < 1:323826/148‑1 (MQ=255) cTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAGGCCACCTGGCCTGGAGCCTGTTGGCGTTCTTCGGCCTTGGCCTGCTGCTgg > 7:63570/1‑149 (MQ=255) tACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAGGCCACCTGGCCTGGAGCCTGTTGGCGTTCTTCGGCCTTGGCCTGCTGCTGGc > 5:143619/1‑149 (MQ=255) tACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAGGCCACCTGGCCTGGAGCCTGTTGGCGTTCTTCGGCCTTGGCCTGCTGCTGGc > 2:248516/1‑149 (MQ=255) gccgcAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAGGCCACCTGGCCTGGAGCCTGTTGGCGTTCTTCGGCCTTGGCCTGCTGCTGGCCTTCa > 3:275589/1‑149 (MQ=255) gccgcAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAGGCCACCTGGCCTGGAGCCTGTTGGCGTTCTTCGGCCTTGGCCTGCTGCTGGCCTTCa > 3:219236/1‑149 (MQ=255) gccgcAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAGGCCACCTGGCCTGGAGCCTGTTGGCGTTCTTCGGCCTTGGCCTGCTGCTGGCCTTCa < 2:119449/149‑1 (MQ=255) cTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAGGCCACCTGGCCTGGAGCCTGTTGGCGTTCTTCGGCCTTGGCCTGCTGCTGGCCTTCACCCCCTGCTCGt > 4:245620/1‑149 (MQ=255) cgatcgaCTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAGGCCACCTGGCCTGGAGCCTGTTGGCGTTCTTCGGCCTTGGCCTGCTGCTGGCCTTCACCCCCTGCTCGTTg < 3:245620/149‑1 (MQ=255) gatcgaCTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAGGCCACCTGGCCTGGAGCCTGTTGGCGTTCTTCGGCCTTGGCCTGCTGCTGGCCTTCACCCCCTGCTCGTTg < 6:265621/148‑1 (MQ=255) gatcgaCTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAGGCCACCTGGCCTGGAGCCTGTTGGCGTTCTTCGGCCTTGGCCTGCTGCTGGCCTTCACCCCCTGCTCGTTGc < 6:3950/149‑1 (MQ=255) tcgaCTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAGGCCACCTGGCCTGGAGCCTGTTGGCGTTCTTCGGCCTTGGCCTGCTGCTGGCCTTCAACCCCTGCTCGTTGcc > 6:104183/1‑148 (MQ=255) aCTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAGGCCACCTGGCCTGGAGCCTGTTGGCGTTCTTCGGCCTTGGCCTGCTGCTGGCCTTCACCCCCTGCTCGTTGCCGAtg < 6:109617/149‑1 (MQ=255) cTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAGGCCACCTGGCCTGGAGCCTGTTGGCGTTCTTCGGCCTTGGCCTGCTGCTGGCCTTCACCCCCTGCTCGTTGCCGAtgc > 5:42812/1‑149 (MQ=255) | ACGACGAGTTCTTCGGCGACAGCGCGGTATACCGCGACCAGCTTGAACTGCTATTGCCTGCCAACGCCCAGGGTCAGTTGCGCCTGGGCTGGCAGGGCTGCGCCGACGCCGGCCTG‑TGCTACCCGCCGCAAACCACCTCGATCGACTTGGGCGGCACCGTAACGCCGGCCGCCGAGCAAGCCAGCGACCAGGCGCTGGCCAGCGGCCTTCAGCAAGGCCACCTGGCCTGGAGCCTGTTGGCGTTCTTCGGCCTTGGCCTGCTGCTGGCCTTCACCCCCTGCTCGTTGCCGATGC > NC_002947/4808693‑4808986 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |