| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,873,746 | C→A | 6.2% | intergenic (‑127/+31) | aqpZ ← / ← PP_4283 | aquaporin Z/GntR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,873,746 | 0 | C | A | 6.2% | 260.1 / 5.8 | 81 | intergenic (‑127/+31) | aqpZ/PP_4283 | aquaporin Z/GntR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (40/35); new base A (3/2); total (44/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.81e-01 | |||||||||||
CCATGCGTTTACCCAGGGACATGCTCATGAATCCATTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCAGCTTGCTGTCGATGTGGTCCATGTGAT > NC_002947/4873598‑4873892 | caaTGCGTTTAACCAGGGAAATGCTCATGAATCCATTCCTAAAGAAGTTGAAAGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGGAGTGGATGGAAGGGCTGcc > 6:48395/3‑149 (MQ=255) aTGCGTTTACCCAGGGACATGCTCATGAATCCATTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGATGCCtt > 3:320479/1‑149 (MQ=255) gTTTACCCAGGGACATGCTCATGAATCCATTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAg < 8:38872/149‑1 (MQ=255) aCCCAGGGACATGCTCATGACTCCATTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCAAGGCAGccc < 7:285342/148‑1 (MQ=255) cccAGGGACATGCTCATGAATCAATTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGcccc > 4:24165/1‑148 (MQ=255) ccAGGGACATGCTCATGAATCCATTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCAAGGCAGCCCTTc < 8:174764/149‑1 (MQ=255) aGGGACATGCTCATGAATCCATTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGa > 5:167726/1‑149 (MQ=255) cTCATGAATCCATTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAg < 7:316556/148‑1 (MQ=255) tCATGAATCCATTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAgg > 7:177811/1‑148 (MQ=255) aTGAATCCATTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCa > 6:164712/1‑148 (MQ=255) aaTCCATTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAAc < 8:233087/148‑1 (MQ=255) tCCATTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGa > 8:36033/1‑148 (MQ=255) aTTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCaa > 5:161362/1‑149 (MQ=255) aTTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCaa < 2:297759/149‑1 (MQ=255) cTCAAGAAGTTGAACTCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAAccc < 3:24165/148‑1 (MQ=255) tCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCtt > 5:103994/1‑149 (MQ=255) tCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCtt > 3:303168/1‑149 (MQ=255) tCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCtt > 4:8049/1‑149 (MQ=255) tCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCtt > 1:87810/1‑149 (MQ=255) aagaagTTGAACGCAACGAATGCGCAAGCCTAACTGCTTGATGAAGGTTTGCTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGACAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGa > 2:46147/1‑149 (MQ=255) gaagTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACg > 1:146534/1‑149 (MQ=255) gTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGa > 1:166586/1‑148 (MQ=255) aaCGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCt > 3:79713/1‑149 (MQ=255) cGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTg < 7:36033/149‑1 (MQ=255) gCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTgg < 2:166586/149‑1 (MQ=255) aaCGAATGCGCATGCCCAACTGCTTGATGAAGGTTTGCTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCTAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGt > 5:110778/1‑149 (MQ=255) aaCGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGt > 2:172098/1‑149 (MQ=255) aaCGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGt > 5:118982/1‑149 (MQ=255) aTGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGtttttt < 6:167726/149‑1 (MQ=255) aTGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGttttt > 8:237853/1‑148 (MQ=255) tGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTc < 8:177811/149‑1 (MQ=255) cgcAAGCCCAACTGCTTGATGAAGGTTTGCTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCaa < 4:153286/149‑1 (MQ=255) gccatcccAAAGGCTTTATTAATGTTTTCTCAAAACAAAATTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCaa < 1:114739/144‑1 (MQ=255) gcAAGCCCAACTGCTTGATGAAGGTTTGCTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCaa > 1:136359/1‑148 (MQ=255) gcAAGCCCAACTGCTTGATGAAGGTTTGCTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCaa > 7:101998/1‑148 (MQ=255) gcAAGCCCAACTGCTTGATGAAGGTTTGCTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCaa > 3:236975/1‑148 (MQ=255) gcAAGCCCAACTGCTTGATGAAGGTTTGCTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAAc < 1:224034/149‑1 (MQ=255) gcAAGCCCAACTGCTTGATGAAGGTTTGCTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAAc < 7:15652/149‑1 (MQ=255) aaCTGCTTGATGAAGGTTTGCTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTATTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCga < 4:79713/149‑1 (MQ=255) aaCTGCTTGATGAAGGTTTGCTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGc > 3:143422/1‑147 (MQ=255) aGGTTTGCTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGc < 2:156593/149‑1 (MQ=255) cTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGt < 2:146534/149‑1 (MQ=255) tCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTc > 3:90182/1‑149 (MQ=255) tCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTc > 5:92550/1‑149 (MQ=255) acaA‑GAATTTAGCAGACCTTTGGGTTATGGCTAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTcc < 6:110778/148‑1 (MQ=255) acaA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTcc > 8:82258/1‑148 (MQ=255) acaA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTcc > 8:142754/1‑148 (MQ=255) acaA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTcc > 7:294383/1‑148 (MQ=255) acaA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTcc > 3:131663/1‑148 (MQ=255) acaA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTcc < 5:228014/148‑1 (MQ=255) acaA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGCGCTGCCTTGCAGCACCTCGATCACGCAGGCAAACGATCACCCCTTGACCGAAACCTTGGCTTTTTTCAACAGATGCGAGAACACTGCATGCAAATCGTcc > 5:74318/1‑148 (MQ=255) caA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCGTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTcc > 1:255947/1‑147 (MQ=255) caA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTcc > 4:139730/1‑147 (MQ=255) aa‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCATCAGATGCGAGAACACGGCATGCAAATCGTCCGAg > 6:223042/1‑149 (MQ=255) aa‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAg > 8:5331/1‑149 (MQ=255) aa‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAg < 6:327719/149‑1 (MQ=255) aa‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAg > 5:327719/1‑149 (MQ=255) aa‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAg < 7:82258/149‑1 (MQ=255) gCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTctcc < 1:172098/149‑1 (MQ=255) cAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTctcct < 3:8049/149‑1 (MQ=255) aGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTctcctc > 1:191586/1‑149 (MQ=255) gACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTc < 2:199873/101‑1 (MQ=255) gACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCg < 4:143422/149‑1 (MQ=255) cTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTcc < 8:101998/149‑1 (MQ=255) tttGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTc > 2:33843/1‑147 (MQ=255) gggTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGa < 6:118982/148‑1 (MQ=255) ggTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGAt > 5:100420/1‑148 (MQ=255) gTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGAtt > 3:307210/1‑148 (MQ=255) ttATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCa < 5:87568/149‑1 (MQ=255) gCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCAGCTTg < 3:139730/149‑1 (MQ=255) gtagtGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCAGCTTGCTGt < 4:303168/149‑1 (MQ=255) tagtGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCAGCTTGCTGTc < 6:161362/149‑1 (MQ=255) gtGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCAGCTTGCTGTCGa < 4:131663/149‑1 (MQ=255) tGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCAGCTTGCTGTCGAt < 6:100420/149‑1 (MQ=255) gatcgaggggCTGCAAGGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCAGCTTGCTGTCGAtgt > 7:267036/8‑149 (MQ=255) cTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCAGCTTGCTGTCGAtgtg < 6:103994/149‑1 (MQ=255) atcgaggggCTGCAAGGCAGCCCTTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCAGCTTGCTGTCGAtgtg > 4:137741/7‑149 (MQ=255) atcgaggggCTGCAAGGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCAGCTTGCTGTCGAtgtg > 7:190590/7‑149 (MQ=255) tGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCAGCTTGCTGTCGATGTgg > 7:192717/1‑149 (MQ=255) gAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCAGCTTGCTGTCGATGTGGTc < 5:164712/149‑1 (MQ=255) aGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATAAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCAGCTTGCTGTCGATGTGGTCCa > 6:321879/1‑149 (MQ=255) gCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCAGCTTGCTGTCGATGTGGTCCAtgt < 7:237853/149‑1 (MQ=255) ccTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCAGCTTGCTGTCGATGTGGTCCATGTGAt > 8:117179/1‑148 (MQ=255) | CCATGCGTTTACCCAGGGACATGCTCATGAATCCATTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAA‑GAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCGATCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCAGCTTGCTGTCGATGTGGTCCATGTGAT > NC_002947/4873598‑4873892 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |