| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,945,392 | G→C | 7.7% | intergenic (+752/+46) | PP_5673 → / ← flhB | D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,945,392 | 0 | G | C | 7.7% | 205.3 / 6.6 | 65 | intergenic (+752/+46) | PP_5673/flhB | D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein |
| Reads supporting (aligned to +/- strand): ref base G (34/26); new base C (2/3); total (36/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.49e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.74e-01 | |||||||||||
GTTATTCCTGCGGGATTTACGCGCGACCGCCTTCGCGTACACCTCGATATTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATC‑GGCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCTGGAACACATAC > NC_002947/4945247‑4945540 | gTTATTCCTGCGGGATTTACGCGCGACCGCCATCGCGTACACCTCGATATTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCgcgggcg > 2:7147/1‑149 (MQ=255) ttCCTGCGGGATTTACGCGCGACCGCCTTCGCGTACACCTCGATATTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGgcgc > 4:260360/1‑149 (MQ=255) ttCCTGCGGGATTTACGCGCGACCGCCTTCGCGTACACCTCGATATTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGgcgc > 2:100830/1‑149 (MQ=255) tCCTGCGGGATTTACGCGCGACCGCCTTCGCGTACACCTCGATATTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCt > 6:77010/1‑149 (MQ=255) ccTGCGGGATTTACGCGCGACCGCCTTCGCGTACACCTCGATATTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCt < 3:260360/148‑1 (MQ=255) cTGCGGGATTTACGCGCGACCGCCTTCGCGTACACCTCGATATTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTc > 6:105514/1‑148 (MQ=255) cTGCGGGATTTACGCGCGACCGCCTTCGCGTACACCTCGATATTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCCCGCGCGgcgcatc > 2:71831/1‑146 (MQ=255) tGCGGGATTTACGCGCGACCGCCTTCGCGTACACCTCGATATTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGa > 6:6603/1‑149 (MQ=255) tGCGGGATTTACGCGCGACCGCCTTCGCGTACACCTCGATATTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGa > 3:139171/1‑149 (MQ=255) cGGGATTTACGCGCGACCGCCTTCGCGTACACCTCGATATTGCGCCGTACAAACACGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCCCGCGCGgcgcatcgcg < 1:71831/149‑7 (MQ=38) tccgcgctCCCGCGTTCGCGTACACCTCTATTTGGCGCCTAAAAAACACGGGGGTGGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAg < 2:296480/146‑1 (MQ=18) gcgcgACCGCCTTCGCGTACACCTCGATATTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCaa > 2:2323/1‑149 (MQ=255) cgcgACCGCCTTCGCGTACACCTCGATATTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAAc > 5:113876/1‑149 (MQ=255) cGCCTTCGCGTACACCTCGATATTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAAc > 5:153458/1‑149 (MQ=255) cGCCTTCGCGTACACCTCGATATTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAAc > 4:259196/1‑149 (MQ=255) cGCCTTCGCGTACACCTCGATATTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCAAGCTTGCTCGCCATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAAc > 6:25196/1‑149 (MQ=255) cgcgTACACCTCGATATTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTAt < 5:281156/147‑1 (MQ=255) cTCGATATTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGATCTTGCTCGCGATTCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCAGAACAg > 3:40180/1‑148 (MQ=255) cTCGATATTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGaa > 5:206295/1‑145 (MQ=255) cTCGATATTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGa < 6:206295/149‑1 (MQ=255) cTCGATATTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGa < 1:2323/149‑1 (MQ=255) cTCGATATTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGA‑GCGCCGCCCGCGCGgcgcatcgc < 2:304920/115‑6 (MQ=18) cTCGATATTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGAACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCTAACCTATCGCCGaa > 7:22210/1‑145 (MQ=255) atatTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCaa < 1:7147/149‑1 (MQ=255) atTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACt > 6:117696/1‑149 (MQ=255) gcCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTcgc > 2:257979/1‑149 (MQ=255) cGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCTAACCTATCGCCGAACAGATCAACTGTCgcgg < 8:22210/149‑1 (MQ=255) acaaacaaGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCgcggcg > 7:5310/1‑148 (MQ=255) caaacaaGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGgcgc < 3:259196/148‑1 (MQ=255) aaacaaGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTAGCTCGCGATGCGCCGCCCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAg > 4:217683/1‑149 (MQ=255) aacaaGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAgg > 6:150176/1‑149 (MQ=255) acaaGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGt > 7:310393/1‑149 (MQ=255) aGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCcg > 3:7979/1‑149 (MQ=255) cgtgcgcgcCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGAt > 5:19648/4‑149 (MQ=255) gcgcgcgcCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATc > 2:122137/1‑149 (MQ=255) gcgcgcgcCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATc < 1:100830/149‑1 (MQ=255) cgcgcgcCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATC‑g < 4:242984/149‑1 (MQ=255) cgcCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATC‑GGCAg < 5:77010/149‑1 (MQ=255) cGGGCACAGGAGGGACTGGCCCGAAACAAATTTAGCAGCGAGCTTGCTCGCGATGCGCCGCGCGGCCGCCGCTCGATCTCACAGGCAACGCAAACCTAACGCCGAACAGATCACCTGTCGCGCCGCAGGTCCGGCGGGATC‑GGCAggac > 7:61454/1‑147 (MQ=25) ggCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATC‑GGCAGgtcgt < 8:5310/149‑1 (MQ=255) ggCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATC‑GGCAGgtcgt > 3:43693/1‑149 (MQ=255) caGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATC‑GGCAGGTCGTCCtt < 6:19648/149‑1 (MQ=255) caGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATC‑GGCAGGTCGTCCtt > 1:33838/1‑149 (MQ=255) aggaggGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATC‑GGCAGGTCGTCCtt > 3:270645/1‑148 (MQ=255) aggGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATC‑GGCAGGTCGTCCTTCAGt < 6:113876/149‑1 (MQ=255) ggACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATC‑GGCAGGTCGTCCTTCAGTgg > 2:51259/1‑149 (MQ=255) gCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATC‑GGCAGGTCGTCCTTCAGTGGCTCTgg < 4:139171/149‑1 (MQ=255) cccGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATC‑GGCAGGTCGTCCTTCAGTGGCTCTggg < 5:150176/149‑1 (MQ=255) aCAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATC‑GGCAGGTCGTCCTTCAGTGGCTCTGGGCGcttg > 2:3475/1‑149 (MQ=255) aCAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATC‑GGCAGGTCGTCCTTCAGTGGCTCTGGGCGcttg > 2:130626/1‑149 (MQ=255) aaTGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCATGTCCGGCGGGATCAGGCAGGTCGTCCTTCAGTGGCTCTGGGCGcttgcc < 1:51259/149‑1 (MQ=255) tGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATC‑GGCAGGTCGTCCTTCAGTGGCTCTGGGCGcttgccctt < 6:153458/149‑1 (MQ=255) ggAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATC‑GGCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCg < 5:105514/149‑1 (MQ=255) gagcgagcTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATC‑GGCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCgg > 7:300382/1‑149 (MQ=255) agcgagcTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATC‑gg > 4:114357/1‑107 (MQ=255) agcgagcTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATC‑gg < 3:114357/107‑1 (MQ=255) gcgagcTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATC‑GGCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGgcg > 2:264041/1‑149 (MQ=255) caagcTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATC‑GGCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGgcgc < 5:25196/147‑1 (MQ=255) gagcTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATC‑GGCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGGcgcg < 5:117696/149‑1 (MQ=255) cgcgATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATC‑GGCAGGTCGTCCTTCAGTGGCTCTGGGCGCATGCCCTTGCCGGCGCGGTATTGGc > 7:227103/1‑148 (MQ=255) gcgATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATC‑GGCAGGTCGTCCTTCAGTGGCTCTGGGCGcttgcccttgc < 8:156327/132‑1 (MQ=255) atcgagcgcCGCCCGCGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATC‑GGCAGGTCGTCCTTCAGTGGCTCTGGGCGcttgcccttgcc < 6:67228/128‑1 (MQ=255) atcgagcgcCGCCCGCGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATC‑GGCAGGTCGTCCTTCAGTGGCTCTGGGCGcttgcccttgcc > 5:67228/6‑133 (MQ=255) tGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATC‑GGCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCt < 1:130626/149‑1 (MQ=255) cgcagcGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATC‑GGCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCTgg < 1:122137/149‑1 (MQ=255) ccgcGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATC‑GGCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCTGGaa < 4:7979/149‑1 (MQ=255) ggcggcGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATC‑GGCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCTGGAACACATAc < 8:300382/149‑1 (MQ=255) ggcggcGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATC‑GGCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCTGGAACACATAc < 8:61454/149‑1 (MQ=255) | GTTATTCCTGCGGGATTTACGCGCGACCGCCTTCGCGTACACCTCGATATTGCGCCGTACAAACAAGGCGGTCGCGCGCGCCGGGCACAGGAGGGACTGGCCCGAAACAAATGTAGGAGCGAGCTTGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCAACGCAAACCTATCGCCGAACAGATCAACTGTCGCGGCGCAGGTCCGGCGGGATC‑GGCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCTGGAACACATAC > NC_002947/4945247‑4945540 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |